Gene: Duzib150G1545

General Information

Structural Information

  • Species Durio zibethinus
  • Gene Identifier Duzib150G1545
  • Transcript Identifier Duzib150G1545.03
  • Gene Type Coding gene
  • Location NW_019167882.1 : 13508341-13515808 : positive

Gene Family Information

  • ID HOM05D006688
  • #Genes/#Species 120/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name LOC111303095
  • name XM_022899128.1
  • pid XP_022754863.1
  • id gene-LOC111303095
  • uniprot A0A6P5ZR11

Descriptions

  • product eukaryotic initiation factor 4A-15-like, transcript variant X3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT2G19430
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT2G19430
GO:0009788
ISO
PLAZA Integrative Orthologynegative regulation of abscisic acid-activated signaling pathway AT2G19430
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA AT2G19430
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc07g040750.2
GO:0006413
IEA
GOA Databasetranslational initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003724
IEA
GOA DatabaseRNA helicase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003743
IEA
GOA Databasetranslation initiation factor activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080008
ISO
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex AT2G19430
GO:0000347
ISO
PLAZA Integrative OrthologyTHO complex AT2G19430
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G19430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011545 DEAD/DEAH box helicase domain
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
16.10.1.1.5 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.THO subcomplex.component THOC6
17.4.2.1 Protein biosynthesis.translation initiation.mRNA loading.mRNA unwinding factor (eIF4A)