Gene: Nitab4.5_0003606g0020

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0003606g0020
  • Transcript Identifier Nitab4.5_0003606g0020.1
  • Gene Type Coding gene
  • Location Nitab4.5_0003606 : 206404-222619 : positive

Gene Family Information

  • ID HOM05D006688
  • #Genes/#Species 120/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0003606g0020.1
  • SR1-identifier Nta17g25230.1

Descriptions

  • Description WD40 repeat, WD40 repeat, conserved site, WD40-repeat-containing domain, WD40/YVTN repeat-like-containing domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA AT2G19430
GO:0009788
ISO
PLAZA Integrative Orthologynegative regulation of abscisic acid-activated signaling pathway AT2G19430
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT2G19430
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT2G19430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G19430
GO:0000347
ISO
PLAZA Integrative OrthologyTHO complex AT2G19430
GO:0080008
ISO
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex AT2G19430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
IPR042626 THO complex subunit 6
Mapman id Description
16.10.1.1.5 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.THO subcomplex.component THOC6