Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_37.g12597 Utricularia gibba HOM05D005707 ORTHO05D007276 0.0e+00 1880.5 942 100.0
MSTRG.14925 Avicennia marina HOM05D005707 ORTHO05D007276 0.0e+00 1446.8 960 76.0
Oeu040469.1 Olea europaea HOM05D005707 ORTHO05D007276 0.0e+00 1400.6 953 74.1
Cfa007084 Carpinus fangiana HOM05D005707 ORTHO05D007276 0.0e+00 1400.2 944 74.4
Haze_03608 Corylus avellana HOM05D005707 ORTHO05D007276 0.0e+00 1399.4 944 74.2
Dinv07863 Davidia involucrata HOM05D005707 ORTHO05D007276 0.0e+00 1394.0 950 73.7
Migut.M00030 Erythranthe guttata HOM05D005707 ORTHO05D007276 0.0e+00 1390.9 953 73.7
PGR142G3494 Punica granatum HOM05D005707 ORTHO05D007276 0.0e+00 1389.8 956 72.7
Gorai.007G166700 Gossypium raimondii HOM05D005707 ORTHO05D007276 0.0e+00 1387.5 940 74.0
Manes.13G062700 Manihot esculenta HOM05D005707 ORTHO05D007276 0.0e+00 1387.5 958 72.8
Gohir.D11G156360 Gossypium hirsutum HOM05D005707 ORTHO05D007276 0.0e+00 1387.1 940 74.0
Gohir.A11G149550 Gossypium hirsutum HOM05D005707 ORTHO05D007276 0.0e+00 1385.9 940 73.7
CiPaw.07G002400 Carya illinoinensis HOM05D005707 ORTHO05D007276 0.0e+00 1380.5 943 73.4
Hma1.2p1_1267F.1_g271460 Hydrangea macrophylla HOM05D005707 ORTHO05D007276 0.0e+00 1380.5 939 73.4
Sabra14G0126000 Salix brachista HOM05D005707 ORTHO05D007276 0.0e+00 1379.4 948 73.7
Duzib138G1526 Durio zibethinus HOM05D005707 ORTHO05D007276 0.0e+00 1378.6 952 72.9
Prupe.3G200600 Prunus persica HOM05D005707 ORTHO05D007276 0.0e+00 1378.6 949 73.3
Actinidia09778 Actinidia chinensis HOM05D005707 ORTHO05D007276 0.0e+00 1377.8 943 73.7
TAR626G1120 Trochodendron aralioides HOM05D005707 ORTHO05D007276 0.0e+00 1377.8 949 72.4
Manes.12G065301 Manihot esculenta HOM05D005707 ORTHO05D007276 0.0e+00 1375.9 943 73.1
CANSAT64G1567 Cannabis sativa HOM05D005707 ORTHO05D007276 0.0e+00 1374.0 958 72.3
PGSC0003DMG400026068 Solanum tuberosum HOM05D005707 ORTHO05D007276 0.0e+00 1373.6 939 73.1
TWI75G1501 Tripterygium wilfordii HOM05D005707 ORTHO05D007276 0.0e+00 1373.2 945 73.8
MD17G1113900 Malus domestica HOM05D005707 ORTHO05D007276 0.0e+00 1372.5 945 73.3
Eucgr.A01050 Eucalyptus grandis HOM05D005707 ORTHO05D007276 0.0e+00 1372.1 945 72.8
Rhsim06G0174400 Rhododendron simsii HOM05D005707 ORTHO05D007276 0.0e+00 1372.1 945 73.3
SGA_v2.0_scaffold73G24514 Striga asiatica HOM05D005707 ORTHO05D007276 0.0e+00 1372.1 932 73.8
GSVIVG01030049001 Vitis vinifera HOM05D005707 ORTHO05D007276 0.0e+00 1371.3 936 74.1
CSS0003308 Camellia sinensis var. sinensis HOM05D005707 ORTHO05D007276 0.0e+00 1370.1 948 72.8
CSS0049316 Camellia sinensis var. sinensis HOM05D005707 ORTHO05D007276 0.0e+00 1370.1 948 72.8
CAN.G308.64 Capsicum annuum HOM05D005707 ORTHO05D007276 0.0e+00 1369.8 952 72.2
Potri.014G165400 Populus trichocarpa HOM05D005707 ORTHO05D007276 0.0e+00 1369.0 949 72.9
Sopen06g023670 Solanum pennellii HOM05D005707 ORTHO05D007276 0.0e+00 1367.1 951 72.3
Solyc06g065170.4 Solanum lycopersicum HOM05D005707 ORTHO05D007276 0.0e+00 1366.7 951 72.2
MD09G1123500 Malus domestica HOM05D005707 ORTHO05D007276 0.0e+00 1362.8 951 72.8
Atru.BG.42.p Acer truncatum HOM05D005707 ORTHO05D007276 0.0e+00 1360.9 929 73.7
Ciclev10018207m.g Citrus clementina HOM05D005707 ORTHO05D007276 0.0e+00 1360.5 938 72.8
Nn1g03422 Nelumbo nucifera HOM05D005707 ORTHO05D007276 0.0e+00 1359.4 943 71.9
RcHm_v2.0_Chr2g0156491 Rosa chinensis HOM05D005707 ORTHO05D007276 0.0e+00 1357.8 948 72.3
ECA240G2058 Erigeron canadensis HOM05D005707 ORTHO05D007276 0.0e+00 1356.7 935 73.0
FvH4_6g40910 Fragaria vesca HOM05D005707 ORTHO05D007276 0.0e+00 1355.9 945 72.1
Nitab4.5_0001082g0050 Nicotiana tabacum HOM05D005707 ORTHO05D007276 0.0e+00 1355.9 937 72.8
MBI16_g36319_MAGBIO Magnolia biondii HOM05D005707 ORTHO05D007276 0.0e+00 1355.1 941 72.2
FAN14G2372 Fragaria x ananassa HOM05D005707 ORTHO05D007276 0.0e+00 1354.7 945 72.0
Lj1C792T2 Lonicera japonica HOM05D005707 ORTHO05D007276 0.0e+00 1353.6 935 72.4
Peaxi162Scf00268g00614 Petunia axillaris HOM05D005707 ORTHO05D007276 0.0e+00 1353.6 952 72.2
FAN05G2777 Fragaria x ananassa HOM05D005707 ORTHO05D007276 0.0e+00 1351.3 945 72.0
FAN02G0692 Fragaria x ananassa HOM05D005707 ORTHO05D007276 0.0e+00 1350.1 945 71.7
HanXRQChr03g0075251 Helianthus annuus HOM05D005707 ORTHO05D007276 0.0e+00 1350.1 936 72.9
ClCG02G009340 Citrullus lanatus HOM05D005707 ORTHO05D007276 0.0e+00 1349.7 943 72.7
CsaV3_6G009510 Cucumis sativus L. HOM05D005707 ORTHO05D007276 0.0e+00 1348.6 942 72.4
Glyma.07G119500 Glycine max HOM05D005707 ORTHO05D007276 0.0e+00 1347.8 964 69.8
QL06p053011 Quercus lobata HOM05D005707 ORTHO05D007276 0.0e+00 1347.8 948 71.7
Sed0013138 Sechium edule HOM05D005707 ORTHO05D007276 0.0e+00 1347.8 935 73.4
Nitab4.5_0000303g0290 Nicotiana tabacum HOM05D005707 ORTHO05D007276 0.0e+00 1347.0 937 72.4
MELO3C025972.2 Cucumis melo HOM05D005707 ORTHO05D007276 0.0e+00 1346.3 943 72.3
PSO732G0538 Papaver somniferum HOM05D005707 ORTHO05D007276 0.0e+00 1346.3 944 70.7
VMungo0331G1616 Vigna mungo HOM05D005707 ORTHO05D007276 0.0e+00 1346.3 951 71.5
TWI18G1214 Tripterygium wilfordii HOM05D005707 ORTHO05D007276 0.0e+00 1345.5 942 71.9
Nn1g03246 Nelumbo nucifera HOM05D005707 ORTHO05D007276 0.0e+00 1345.1 941 71.3
Lsat_1_v5_gn_0_5460 Lactuca sativa HOM05D005707 ORTHO05D007276 0.0e+00 1344.7 948 71.8
FAN09G4573 Fragaria x ananassa HOM05D005707 ORTHO05D007276 0.0e+00 1343.6 945 71.4
Lj8A134G73 Lonicera japonica HOM05D005707 ORTHO05D007276 0.0e+00 1343.2 938 72.1
Phvul.010G042100 Phaseolus vulgaris HOM05D005707 ORTHO05D007276 0.0e+00 1342.8 950 70.8
arahy.Tifrunner.gnm1.ann1.T3MKLR Arachis hypogaea HOM05D005707 ORTHO05D007276 0.0e+00 1340.5 964 70.1
THA.LOC104808851 Tarenaya hassleriana HOM05D005707 ORTHO05D007276 0.0e+00 1340.5 940 71.3
Lj6g0020016 Lotus japonicus HOM05D005707 ORTHO05D007276 0.0e+00 1340.1 958 70.9
AUR62001346 Chenopodium quinoa HOM05D005707 ORTHO05D007276 0.0e+00 1337.4 941 71.5
PSO675G5925 Papaver somniferum HOM05D005707 ORTHO05D007276 0.0e+00 1337.4 944 70.4
Glyma.03G104400 Glycine max HOM05D005707 ORTHO05D007276 0.0e+00 1337.0 953 70.1
Lj1g0027558 Lotus japonicus HOM05D005707 ORTHO05D007276 0.0e+00 1337.0 950 70.6
Ah.15g094340 Amaranthus hybridus HOM05D005707 ORTHO05D007276 0.0e+00 1336.2 935 72.2
Aqoxy2G03044 Aquilegia oxysepala HOM05D005707 ORTHO05D007276 0.0e+00 1334.7 958 69.8
Ca_27368_v3 Cicer arietinum L. HOM05D005707 ORTHO05D007276 0.0e+00 1333.9 957 70.4
DCAR_012906 Daucus carota HOM05D005707 ORTHO05D007276 0.0e+00 1332.4 930 72.0
Lsat_1_v5_gn_9_90020 Lactuca sativa HOM05D005707 ORTHO05D007276 0.0e+00 1332.4 963 70.9
Sed0020801 Sechium edule HOM05D005707 ORTHO05D007276 0.0e+00 1331.2 941 71.2
Cc07_g12010 Coffea canephora HOM05D005707 ORTHO05D007276 0.0e+00 1330.9 938 70.6
Thhalv10002393m.g Eutrema salsugineum HOM05D005707 ORTHO05D007276 0.0e+00 1330.9 940 70.7
AUR62025658 Chenopodium quinoa HOM05D005707 ORTHO05D007276 0.0e+00 1329.3 941 71.3
arahy.Tifrunner.gnm1.ann1.DQM4AF Arachis hypogaea HOM05D005707 ORTHO05D007276 0.0e+00 1324.7 998 67.9
A07p06540 Brassica napus HOM05D005707 ORTHO05D007276 0.0e+00 1322.0 939 70.2
Sp3g23690 Schrenkiella parvula HOM05D005707 ORTHO05D007276 0.0e+00 1321.6 939 70.3
SpUn0142_0010 Schrenkiella parvula HOM05D005707 ORTHO05D007276 0.0e+00 1321.6 939 70.3
BcaC06g35905 Brassica carinata HOM05D005707 ORTHO05D007276 0.0e+00 1321.2 939 70.1
BolC7t41423H Brassica oleracea HOM05D005707 ORTHO05D007276 0.0e+00 1321.2 939 70.1
BraA07t28449Z Brassica rapa HOM05D005707 ORTHO05D007276 0.0e+00 1320.4 939 70.1
Lalb_Chr19g0124221 Lupinus albus HOM05D005707 ORTHO05D007276 0.0e+00 1320.4 968 69.0
AL3G42770 Arabidopsis lyrata HOM05D005707 ORTHO05D007276 0.0e+00 1319.7 939 70.2
Carub.0003s2668 Capsella rubella HOM05D005707 ORTHO05D007276 0.0e+00 1318.5 939 70.0
EL10Ac7g18165 Beta vulgaris HOM05D005707 ORTHO05D007276 0.0e+00 1317.0 939 70.5
C07p09820 Brassica napus HOM05D005707 ORTHO05D007276 0.0e+00 1315.4 939 69.8
BcaB06g26833 Brassica carinata HOM05D005707 ORTHO05D007276 0.0e+00 1314.3 934 70.2
Medtr1g019500 Medicago truncatula HOM05D005707 ORTHO05D007276 0.0e+00 1314.3 956 69.2
AT2G05170 Arabidopsis thaliana HOM05D005707 ORTHO05D007276 0.0e+00 1312.4 938 69.8
CARHR103040 Cardamine hirsuta HOM05D005707 ORTHO05D007276 0.0e+00 1312.0 939 69.8
TPR.G3804 Trifolium pratense HOM05D005707 ORTHO05D007276 0.0e+00 1311.2 954 69.1
Hund18608 Selenicereus undatus HOM05D005707 ORTHO05D007276 0.0e+00 1305.8 956 69.1
vmacro12103 Vaccinium macrocarpon HOM05D005707 ORTHO05D007276 0.0e+00 1302.7 944 70.2
Aa31LG9G17700 Aethionema arabicum HOM05D005707 ORTHO05D007276 0.0e+00 1292.7 955 67.9
ATR0626G192 Amborella trichopoda HOM05D005707 ORTHO05D007276 0.0e+00 1292.7 954 68.3
Zm00001eb420950 Zea mays HOM05D005707 ORTHO05D007276 0.0e+00 1286.2 955 66.3
Os04g0382700 Oryza sativa ssp. japonica HOM05D005707 ORTHO05D007276 0.0e+00 1278.1 947 66.8
COL.COLO4_09234 Corchorus olitorius HOM05D005707 ORTHO05D007276 0.0e+00 1268.4 954 68.8
Oeu012343.5 Olea europaea HOM05D005707 ORTHO05D007276 0.0e+00 1234.6 924 68.8
SEGI_38374 Sequoiadendron giganteum HOM05D005707 ORTHO05D007276 0.0e+00 1225.3 960 64.5
Thecc.01G191800 Theobroma cacao HOM05D005707 ORTHO05D007276 0.0e+00 1214.9 826 73.6
DCAR_028089 Daucus carota HOM05D005707 ORTHO05D007276 0.0e+00 1164.4 845 69.5
Psat6g013160 Pisum sativum HOM05D005707 ORTHO05D007276 0.0e+00 1162.9 838 69.6
Mapoly0022s0120 Marchantia polymorpha HOM05D005707 ORTHO05D007276 0.0e+00 1089.3 980 55.8
AagrBONN_evm.TU.Sc2ySwM_344.1573 Anthoceros agrestis HOM05D005707 ORTHO05D007276 0.0e+00 1087.4 960 57.3
Lalb_Chr01g0023301 Lupinus albus HOM05D005707 ORTHO05D007276 2.6e-311 1072.0 734 72.1
Pp3c25_5560 Physcomitrium patens HOM05D005707 ORTHO05D007276 1.7e-307 1059.3 1006 53.7
Sc15g0001000 Simmondsia chinensis HOM05D005707 ORTHO05D007276 7.8e-300 1033.9 698 74.2
SMO329G0026 Selaginella moellendorffii HOM05D005707 ORTHO05D007276 4.3e-298 1028.1 933 56.9
Cpa.g.sc211.13 Carica papaya HOM05D005707 ORTHO05D007276 2.0e-287 992.6 942 57.4
Hma1.2p1_2056F.1_g312820 Hydrangea macrophylla HOM05D005707 ORTHO05D007276 9.0e-280 967.2 640 75.2
Hma1.2p1_1267F.1_g271470 Hydrangea macrophylla HOM05D005707 ORTHO05D007276 4.2e-277 958.4 638 74.8
CDE12G0215 Ceratophyllum demersum HOM05D005707 ORTHO05D007276 2.5e-250 869.4 696 62.1
CBR_g20017 Chara braunii HOM05D005707 ORTHO05D007276 1.3e-209 734.2 751 51.4
Lsat_1_v5_gn_9_104540 Lactuca sativa HOM05D005707 ORTHO05D007276 2.3e-182 643.7 465 69.7
HPP92_028369 Vanilla planifolia HOM05D005707 ORTHO05D007276 4.2e-160 569.7 435 66.2
HPP92_028368 Vanilla planifolia HOM05D005707 ORTHO05D007276 4.5e-114 416.8 304 66.1
Cre02.g095074 Chlamydomonas reinhardtii HOM05D005707 ORTHO05D007276 2.2e-100 371.3 1302 24.7
PRCOL_00006472 Prasinoderma coloniale HOM05D005707 ORTHO05D007276 2.8e-100 370.9 625 38.4
Lalb_Chr01g0023291 Lupinus albus HOM05D005707 ORTHO05D007276 6.2e-63 246.9 203 61.1
Nn6g32392 Nelumbo nucifera HOM05D005707 ORTHO05D007276 2.4e-59 235.0 191 62.3
HPP92_014038 Vanilla planifolia HOM05D005707 ORTHO05D007276 9.9e-45 186.4 176 58.0
SEGI_06176 Sequoiadendron giganteum HOM05D005707 ORTHO05D007276 1.4e-43 182.6 301 38.5
Nn6g32391 Nelumbo nucifera HOM05D005707 ORTHO05D007276 5.1e-41 174.1 110 76.4
Peaxi162Scf00585g00082 Petunia axillaris HOM05D000636 ORTHO05D002338 4.5e-37 161.0 131 62.6
HPP92_014037 Vanilla planifolia HOM05D005707 ORTHO05D048631 2.4e-35 155.2 139 59.0
HPP92_014036 Vanilla planifolia HOM05D005707 ORTHO05D007276 3.0e-33 148.3 202 40.1
Nn2g13354 Nelumbo nucifera HOM05D005707 ORTHO05D007276 3.0e-25 121.7 64 87.5
VMungo0331G0660 Vigna mungo HOM05D000100 ORTHO05D000052 1.3e-12 79.7 79 55.7
MD09G1123100 Malus domestica HOM05D005707 ORTHO05D048631 1.1e-06 60.1 45 66.7


User provided reference genes

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