Gene: COL.COLO4_09234

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_09234
  • Transcript Identifier COL.rna8031
  • Gene Type Coding gene
  • Location AWUE01014156.1 : 78823-82757 : negative

Gene Family Information

  • ID HOM05D005707
  • #Genes/#Species 136/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna8031
  • GenBank OMP04873.1
  • id gene9206
  • gene_name COLO4_09234
  • uniprot A0A1R3KCQ9

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT2G05170

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033263
IEA
GOA DatabaseCORVET complex
GO:0030897
IEA
GOA DatabaseHOPS complex
GO:0009705
IEA
GOA Databaseplant-type vacuole membrane
GO:0005774
IEA
GOA Databasevacuolar membrane
GO:0005773
IEA
GOA Databasevacuole
GO:0016020
IEA
GOA Databasemembrane
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT2G05170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR016528 Vacuolar protein sorting-associated protein 11
IPR024763 Vacuolar protein sorting protein 11, C-terminal
IPR036322 WD40-repeat-containing domain superfamily
IPR001841 Zinc finger, RING-type
IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat
Mapman id Description
22.3.4.9.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.component VPS11