Gene: Sopen06g023670

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g023670
  • Transcript Identifier Sopen06g023670.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 51089280-51094447 : positive

Gene Family Information

  • ID HOM05D005707
  • #Genes/#Species 136/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g023670.1

Descriptions

  • Description Homologous to yeast VPS11. Forms a complex with VCL1 and AtVPS33. Involved in vacuolar biogenesis. | vacuolar protein sorting 11 (VPS11) | FUNCTIONS IN: transporter activity, binding, zinc ion binding | INVOLVED IN: vacuole organization | LOCATED IN: plant-type vacuole membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 11 , Zinc finger, RING-type , Armadillo-type fold
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT2G05170

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009705
ISO
PLAZA Integrative Orthologyplant-type vacuole membrane AT2G05170
GO:0033263
ISO
PLAZA Integrative OrthologyCORVET complex AT2G05170
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT2G05170
GO:0030897
ISO
PLAZA Integrative OrthologyHOPS complex AT2G05170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016528 Vacuolar protein sorting-associated protein 11
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR024763 Vacuolar protein sorting protein 11, C-terminal
IPR036322 WD40-repeat-containing domain superfamily
IPR001841 Zinc finger, RING-type
IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
22.3.4.9.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.component VPS11