Gene: Solyc06g065170.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g065170.4
  • Transcript Identifier Solyc06g065170.4.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 38274013-38279192 : positive

Gene Family Information

  • ID HOM05D005707
  • #Genes/#Species 136/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g065170.4.1
  • uniprot A0A3Q7GVL1
  • gene_id Solyc06g065170

Descriptions

  • Description Vacuolar protein-sorting-associated protein 11-like protein (AHRD V3.3 *** A0A2G2WKC4_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048284
IBA
GOA Databaseorganelle fusion
GO:0006904
IBA
GOA Databasevesicle docking involved in exocytosis
GO:0007032
IBA
GOA Databaseendosome organization
GO:0007033
IBA
GOA Databasevacuole organization
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030674
IBA
GOA Databaseprotein-macromolecule adaptor activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT2G05170
GO:0030897
IBA
IEA
GOA DatabaseHOPS complex
GO:0005768
IBA
GOA Databaseendosome
GO:0005773
IEA
GOA Databasevacuole
GO:0005774
IEA
GOA Databasevacuolar membrane
GO:0009705
IEA
GOA Databaseplant-type vacuole membrane
GO:0033263
IEA
GOA DatabaseCORVET complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024763 Vacuolar protein sorting protein 11, C-terminal
IPR016528 Vacuolar protein sorting-associated protein 11
IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR001841 Zinc finger, RING-type
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
22.3.4.9.1 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.component VPS11