Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 5.0e-171 604.4 307 100.0
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 1.2e-55 221.1 374 41.2
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 6.5e-54 215.3 374 38.0
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 9.4e-53 211.5 359 40.1
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 1.4e-51 207.6 336 38.1
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 2.3e-51 206.8 362 40.6
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 1.5e-50 204.1 387 37.5
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 4.1e-48 196.1 391 35.3
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 4.5e-47 192.6 390 34.9
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 5.9e-47 192.2 330 37.6
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 5.9e-47 192.2 389 35.7
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 1.3e-46 191.0 389 35.5
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 2.9e-46 189.9 374 35.6
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 6.5e-46 188.7 340 39.1
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 6.5e-46 188.7 375 34.1
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 6.5e-46 188.7 376 35.4
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 3.6e-44 183.0 386 34.2
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 8.0e-44 181.8 385 35.8
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 1.0e-43 181.4 394 33.8
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 1.0e-43 181.4 315 37.5
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 1.0e-43 181.4 401 32.9
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 1.4e-43 181.0 377 36.3
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 5.2e-43 179.1 381 33.1
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 1.2e-42 177.9 396 36.6
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 5.7e-42 175.6 371 34.2
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 1.3e-41 174.5 374 34.2
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 1.7e-41 174.1 364 34.9
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 1.7e-41 174.1 354 36.7
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 2.8e-41 173.3 371 34.5
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.8e-41 173.3 368 35.3
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 3.7e-41 172.9 357 35.9
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 3.7e-41 172.9 359 36.2
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 4.8e-41 172.6 357 35.6
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 1.1e-40 171.4 396 33.6
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 1.8e-40 170.6 394 33.2
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 2.4e-40 170.2 334 37.7
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 2.4e-40 170.2 380 34.5
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 3.1e-40 169.9 347 35.4
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 4.1e-40 169.5 366 33.9
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 5.3e-40 169.1 379 33.0
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 5.3e-40 169.1 399 32.6
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 7.0e-40 168.7 363 33.9
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 7.0e-40 168.7 383 35.5
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 1.2e-39 167.9 365 33.4
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 1.2e-39 167.9 345 34.8
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 1.6e-39 167.5 379 33.0
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 2.7e-39 166.8 364 33.5
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 2.7e-39 166.8 378 31.7
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 3.5e-39 166.4 364 33.5
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 3.5e-39 166.4 366 34.7
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 4.5e-39 166.0 377 34.0
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 4.5e-39 166.0 361 36.0
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 5.9e-39 165.6 386 33.9
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 7.7e-39 165.2 378 32.5
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 1.0e-38 164.9 387 33.6
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 1.7e-38 164.1 390 33.1
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 1.7e-38 164.1 375 34.7
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 2.2e-38 163.7 363 33.6
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 6.5e-38 162.2 386 33.9
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 1.1e-37 161.4 384 32.8
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 1.1e-37 161.4 387 34.1
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 1.1e-37 161.4 379 33.2
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 1.5e-37 161.0 367 33.0
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 1.5e-37 161.0 367 33.0
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 1.5e-37 161.0 384 34.1
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 1.9e-37 160.6 358 35.5
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 2.5e-37 160.2 376 33.0
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 2.5e-37 160.2 349 34.7
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 3.2e-37 159.8 228 42.5
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 3.2e-37 159.8 379 33.2
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 5.5e-37 159.1 389 32.1
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 5.5e-37 159.1 379 34.6
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 9.4e-37 158.3 374 33.7
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 9.4e-37 158.3 381 32.5
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 1.6e-36 157.5 325 35.1
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 2.1e-36 157.1 379 32.7
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 2.7e-36 156.8 387 31.0
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 3.6e-36 156.4 374 33.7
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 3.6e-36 156.4 341 34.0
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 3.6e-36 156.4 370 30.8
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 4.7e-36 156.0 360 33.9
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 1.4e-35 154.5 325 34.5
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 8.8e-35 151.8 388 32.7
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 8.3e-33 145.2 170 44.7
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 1.1e-32 144.8 385 31.9
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 2.4e-32 143.7 444 30.4
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.4e-32 143.7 345 32.5
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 5.4e-32 142.5 300 35.0
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 1.3e-30 137.9 338 34.0
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.8e-30 136.3 181 44.2
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 1.6e-28 131.0 169 42.6
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 2.3e-27 127.1 165 42.4
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 1.2e-26 124.8 167 42.5
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 3.3e-21 106.7 290 29.3
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 1.2e-20 104.8 142 43.7
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.2e-20 104.8 342 27.8
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 8.0e-20 102.1 169 39.1
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 3.0e-19 100.1 253 32.8
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 2.1e-12 77.4 233 29.6
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 2.8e-12 77.0 245 28.6
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 4.7e-12 76.3 61 62.3
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 1.8e-11 74.3 168 35.7
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 3.4e-10 70.1 72 52.8
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 9.8e-10 68.6 346 23.7
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 1.4e-08 64.7 104 31.7
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 3.5e-07 60.1 95 38.9


User provided reference genes

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