Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_21.g20172 Utricularia gibba HOM05D005935 ORTHO05D007012 3.1e-92 342.0 204 100.0
Ah.06g188880 Amaranthus hybridus HOM05D005935 ORTHO05D007012 2.4e-76 289.3 205 86.8
Cc02_g34830 Coffea canephora HOM05D005935 ORTHO05D007012 4.0e-76 288.5 204 85.3
SalBow3G1520 Salvia bowleyana HOM05D005935 ORTHO05D007012 4.0e-76 288.5 204 85.8
MSTRG.27950 Avicennia marina HOM05D005935 ORTHO05D007012 1.5e-75 286.6 205 88.3
SGA_v2.0_scaffold80G25879 Striga asiatica HOM05D005935 ORTHO05D007012 4.4e-75 285.0 205 86.8
SGA_v2.0_scaffold81G26126 Striga asiatica HOM05D005935 ORTHO05D007012 2.2e-74 282.7 205 86.8
ClCG02G015080 Citrullus lanatus HOM05D005935 ORTHO05D007012 1.9e-73 279.6 204 84.8
MELO3C004198.2 Cucumis melo HOM05D005935 ORTHO05D007012 1.9e-73 279.6 204 84.8
Sed0001365 Sechium edule HOM05D005935 ORTHO05D007012 2.4e-73 279.3 204 83.3
Migut.N01391 Erythranthe guttata HOM05D005935 ORTHO05D007012 3.2e-73 278.9 206 86.4
EL10Ac4g09829 Beta vulgaris HOM05D005935 ORTHO05D007012 5.4e-73 278.1 206 85.4
CsaV3_2G006940 Cucumis sativus L. HOM05D005935 ORTHO05D007012 9.3e-73 277.3 204 83.8
Dinv24425 Davidia involucrata HOM05D005935 ORTHO05D007012 9.3e-73 277.3 206 84.0
Eucgr.H03282 Eucalyptus grandis HOM05D005935 ORTHO05D007012 1.6e-72 276.6 202 86.1
Peaxi162Scf00673g00126 Petunia axillaris HOM05D005935 ORTHO05D007012 4.6e-72 275.0 194 86.6
Lsat_1_v5_gn_5_102820 Lactuca sativa HOM05D005935 ORTHO05D007012 6.0e-72 274.6 204 82.8
FvH4_6g07240 Fragaria vesca HOM05D005935 ORTHO05D007012 8.7e-71 270.8 202 84.7
Hma1.2p1_0008F-1.1_g005750 Hydrangea macrophylla HOM05D005935 ORTHO05D007012 1.1e-70 270.4 205 83.9
Aqoxy2G00839 Aquilegia oxysepala HOM05D005935 ORTHO05D007012 1.9e-70 269.6 206 83.5
CAN.G1715.16 Capsicum annuum HOM05D005935 ORTHO05D007012 1.9e-70 269.6 204 82.8
Manes.09G175700 Manihot esculenta HOM05D005935 ORTHO05D007012 1.9e-70 269.6 201 85.6
Solyc01g100330.3 Solanum lycopersicum HOM05D005935 ORTHO05D007012 1.9e-70 269.6 204 81.4
Sopen01g043840 Solanum pennellii HOM05D005935 ORTHO05D007012 1.9e-70 269.6 204 81.4
PGSC0003DMG400002806 Solanum tuberosum HOM05D005935 ORTHO05D007012 4.3e-70 268.5 204 80.9
MD04G1195100 Malus domestica HOM05D005935 ORTHO05D007012 5.6e-70 268.1 201 83.1
Zm00001eb121760 Zea mays HOM05D005935 ORTHO05D007012 1.3e-69 266.9 203 79.3
GSVIVG01031220001 Vitis vinifera HOM05D005935 ORTHO05D007012 1.6e-69 266.5 206 80.6
vmacro01555 Vaccinium macrocarpon HOM05D005935 ORTHO05D007012 2.8e-69 265.8 248 71.0
TAR362G1094 Trochodendron aralioides HOM05D005935 ORTHO05D007012 4.8e-69 265.0 206 81.6
Os03g0831900 Oryza sativa ssp. japonica HOM05D005935 ORTHO05D007012 6.2e-69 264.6 197 82.7
Atru.chr2.148 Acer truncatum HOM05D005935 ORTHO05D007012 8.1e-69 264.2 206 81.1
PGR031G1309 Punica granatum HOM05D005935 ORTHO05D007012 8.1e-69 264.2 204 78.9
FAN02G1619 Fragaria x ananassa HOM05D005935 ORTHO05D007012 1.1e-68 263.8 211 81.0
RcHm_v2.0_Chr3g0456881 Rosa chinensis HOM05D005935 ORTHO05D007012 1.1e-68 263.8 205 81.0
CiPaw.07G028100 Carya illinoinensis HOM05D005935 ORTHO05D007012 1.4e-68 263.5 205 80.5
Aqoxy4G02482 Aquilegia oxysepala HOM05D005935 ORTHO05D007012 1.8e-68 263.1 206 81.6
Prupe.6G314900 Prunus persica HOM05D005935 ORTHO05D007012 2.4e-68 262.7 205 81.5
FAN05G5324 Fragaria x ananassa HOM05D005935 ORTHO05D007012 3.1e-68 262.3 211 80.6
COL.COLO4_04140 Corchorus olitorius HOM05D005935 ORTHO05D007012 4.0e-68 261.9 205 81.0
Haze_04079 Corylus avellana HOM05D005935 ORTHO05D007012 4.0e-68 261.9 194 84.0
FAN14G3557 Fragaria x ananassa HOM05D005935 ORTHO05D007012 4.0e-68 261.9 211 80.6
Phvul.001G225500 Phaseolus vulgaris HOM05D005935 ORTHO05D007012 6.9e-68 261.2 205 80.5
HanXRQChr10g0299201 Helianthus annuus HOM05D005935 ORTHO05D007012 3.4e-67 258.8 205 81.5
Thecc.05G321000 Theobroma cacao HOM05D005935 ORTHO05D007012 3.4e-67 258.8 205 81.0
MD12G1207200 Malus domestica HOM05D005935 ORTHO05D007012 4.4e-67 258.5 203 80.8
Glyma.19G228900 Glycine max HOM05D005935 ORTHO05D007012 5.8e-67 258.1 204 79.4
Gohir.D08G223300 Gossypium hirsutum HOM05D005935 ORTHO05D007012 7.6e-67 257.7 205 80.0
Gorai.004G237200 Gossypium raimondii HOM05D005935 ORTHO05D007012 7.6e-67 257.7 205 80.0
Gohir.A08G206600 Gossypium hirsutum HOM05D005935 ORTHO05D007012 9.9e-67 257.3 205 80.0
Cpa.g.sc48.144 Carica papaya HOM05D005935 ORTHO05D007012 1.7e-66 256.5 205 81.0
TAR636G0846 Trochodendron aralioides HOM05D005935 ORTHO05D007012 1.7e-66 256.5 205 80.0
SEGI_34613 Sequoiadendron giganteum HOM05D005935 ORTHO05D007012 3.8e-66 255.4 205 76.1
Ca_09298_v3 Cicer arietinum L. HOM05D005935 ORTHO05D007012 4.9e-66 255.0 204 77.9
AUR62000683 Chenopodium quinoa HOM05D005935 ORTHO05D007012 6.4e-66 254.6 205 78.5
Nitab4.5_0013342g0020 Nicotiana tabacum HOM05D000001 ORTHO05D004269 1.9e-65 253.1 208 78.8
Actinidia16851 Actinidia chinensis HOM05D005935 ORTHO05D007012 2.4e-65 252.7 196 81.6
arahy.Tifrunner.gnm1.ann1.7UDZ1N Arachis hypogaea HOM05D005935 ORTHO05D007012 2.4e-65 252.7 205 76.6
Nitab4.5_0000155g0010 Nicotiana tabacum HOM05D005935 ORTHO05D007012 5.4e-65 251.5 204 77.5
CANSAT54G1507 Cannabis sativa HOM05D005935 ORTHO05D007012 7.1e-65 251.1 206 78.2
ECA234G4853 Erigeron canadensis HOM05D005935 ORTHO05D007012 7.1e-65 251.1 198 78.3
Glyma.03G231900 Glycine max HOM05D005935 ORTHO05D007012 7.1e-65 251.1 204 78.4
arahy.Tifrunner.gnm1.ann1.G5WI6L Arachis hypogaea HOM05D005935 ORTHO05D007012 1.2e-64 250.4 205 77.6
arahy.Tifrunner.gnm1.ann1.H1X696 Arachis hypogaea HOM05D005935 ORTHO05D007012 1.2e-64 250.4 205 77.6
arahy.Tifrunner.gnm1.ann1.I9BDFC Arachis hypogaea HOM05D005935 ORTHO05D007012 1.2e-64 250.4 205 77.1
Medtr7g112060 Medicago truncatula HOM05D005935 ORTHO05D007012 1.2e-64 250.4 203 75.4
BolC5t34806H Brassica oleracea HOM05D002110 ORTHO05D007012 1.6e-64 250.0 193 75.1
BraA05t22944Z Brassica rapa HOM05D002110 ORTHO05D007012 1.6e-64 250.0 193 76.7
Lj1g0021681 Lotus japonicus HOM05D005935 ORTHO05D007012 2.1e-64 249.6 205 78.5
Nn3g21642 Nelumbo nucifera HOM05D005935 ORTHO05D007012 2.1e-64 249.6 205 77.6
VMungo1383G1193 Vigna mungo HOM05D005935 ORTHO05D007012 2.1e-64 249.6 201 78.6
THA.LOC104802776 Tarenaya hassleriana HOM05D005935 ORTHO05D007012 3.5e-64 248.8 194 77.8
Lalb_Chr04g0260471 Lupinus albus HOM05D005935 ORTHO05D007012 4.6e-64 248.4 206 70.9
Lalb_Chr18g0046051 Lupinus albus HOM05D005935 ORTHO05D007012 4.6e-64 248.4 206 76.7
BcaC05g30089 Brassica carinata HOM05D005935 ORTHO05D007012 6.0e-64 248.1 193 75.1
Sc09g0002670 Simmondsia chinensis HOM05D005935 ORTHO05D007012 1.0e-63 247.3 205 79.0
CDE11G0767 Ceratophyllum demersum HOM05D005935 ORTHO05D007012 2.3e-63 246.1 202 80.7
TWI56G1463 Tripterygium wilfordii HOM05D005935 ORTHO05D007012 2.3e-63 246.1 197 81.2
ATR0767G209 Amborella trichopoda HOM05D005935 ORTHO05D007012 3.0e-63 245.7 205 77.6
C05p61480 Brassica napus HOM05D002110 ORTHO05D007012 3.9e-63 245.4 194 78.4
CDE05G0147 Ceratophyllum demersum HOM05D005935 ORTHO05D007012 5.1e-63 245.0 202 80.7
CARHR080230 Cardamine hirsuta HOM05D005935 ORTHO05D007012 6.6e-63 244.6 204 76.5
Potri.013G010300 Populus trichocarpa HOM05D005935 ORTHO05D007012 2.5e-62 242.7 201 78.1
TWI36G1229 Tripterygium wilfordii HOM05D005935 ORTHO05D007012 3.3e-62 242.3 203 78.8
Carub.0003s0513 Capsella rubella HOM05D005935 ORTHO05D007012 4.3e-62 241.9 200 72.0
BcaC05g29782 Brassica carinata HOM05D005935 ORTHO05D007012 5.6e-62 241.5 193 74.6
PSO170G3047 Papaver somniferum HOM05D005935 ORTHO05D007012 1.6e-61 240.0 196 79.1
PSO357G0321 Papaver somniferum HOM05D005935 ORTHO05D007012 1.6e-61 240.0 196 79.1
QL01p019294 Quercus lobata HOM05D005935 ORTHO05D007012 2.8e-61 239.2 194 78.9
QL03p018299 Quercus lobata HOM05D005935 ORTHO05D007012 2.8e-61 239.2 204 74.5
Sp3g04650 Schrenkiella parvula HOM05D005935 ORTHO05D007012 2.8e-61 239.2 200 71.0
AT3G05760 Arabidopsis thaliana HOM05D005935 ORTHO05D007012 1.1e-60 237.3 200 71.5
Psat3g013040 Pisum sativum HOM05D005935 ORTHO05D007012 1.4e-60 236.9 199 74.4
AL3G16500 Arabidopsis lyrata HOM05D005935 ORTHO05D007012 3.1e-60 235.7 200 70.5
Ciclev10002528m.g Citrus clementina HOM05D005935 ORTHO05D007012 3.1e-60 235.7 197 78.7
FAN09G4449 Fragaria x ananassa HOM05D005935 ORTHO05D007012 3.1e-60 235.7 156 80.1
Pp3c4_20180 Physcomitrium patens HOM05D005935 ORTHO05D007012 4.5e-59 231.9 201 74.6
Mapoly0111s0002 Marchantia polymorpha HOM05D005935 ORTHO05D007012 9.9e-59 230.7 206 69.4
DCAR_005416 Daucus carota HOM05D005935 ORTHO05D007012 3.8e-58 228.8 170 85.3
PSO478G5244 Papaver somniferum HOM05D005935 ORTHO05D007012 6.4e-58 228.0 196 76.5
HPP92_015241 Vanilla planifolia HOM05D005935 ORTHO05D007012 2.4e-57 226.1 195 77.4
Duzib128G1094 Durio zibethinus HOM05D005935 ORTHO05D007012 4.2e-57 225.3 157 76.4
TPR.G1633 Trifolium pratense HOM05D005935 ORTHO05D007012 9.3e-57 224.2 194 73.2
CSS0047945 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 2.1e-56 223.0 159 87.4
AUR62005273 Chenopodium quinoa HOM05D005935 ORTHO05D007012 3.5e-56 222.2 197 74.1
Thhalv10022198m.g Eutrema salsugineum HOM05D005935 ORTHO05D007012 1.9e-54 216.5 274 56.2
AagrBONN_evm.TU.Sc2ySwM_344.1201 Anthoceros agrestis HOM05D005935 ORTHO05D007012 5.6e-54 214.9 147 72.1
Aa31LG5G16170 Aethionema arabicum HOM05D005935 ORTHO05D007012 2.8e-53 212.6 207 59.4
Hund21747 Selenicereus undatus HOM05D005935 ORTHO05D007012 2.8e-53 212.6 204 71.6
Hund07136 Selenicereus undatus HOM05D005935 ORTHO05D007012 4.8e-53 211.8 293 54.6
Nitab4.5_0000368g0260 Nicotiana tabacum HOM05D005935 ORTHO05D007012 2.4e-52 209.5 203 67.5
AagrBONN_evm.TU.Sc2ySwM_228.1845 Anthoceros agrestis HOM05D005935 ORTHO05D007012 2.0e-51 206.5 143 70.6
SMO201G0167 Selaginella moellendorffii HOM05D005935 ORTHO05D007012 3.8e-50 202.2 203 64.5
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05D005935 ORTHO05D007012 1.1e-49 200.7 129 76.7
Rhsim11G0094200 Rhododendron simsii HOM05D005935 ORTHO05D007012 1.4e-49 200.3 215 58.1
CSS0009551 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 3.5e-48 195.7 197 71.1
Oeu013219.2 Olea europaea HOM05D005935 ORTHO05D007012 3.7e-45 185.7 224 64.3
Lj5A336T44 Lonicera japonica HOM05D005935 ORTHO05D007012 2.4e-44 183.0 107 84.1
Pp3c12_7700 Physcomitrium patens HOM05D005935 ORTHO05D007012 6.5e-42 174.9 160 73.8
CSS0024691 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 1.3e-39 167.2 145 66.9
RcHm_v2.0_Chr7g0179971 Rosa chinensis HOM05D005935 ORTHO05D007012 1.5e-38 163.7 142 65.5
Sabra13G0008800 Salix brachista HOM05D005935 ORTHO05D007012 5.7e-38 161.8 223 48.4
Nitab4.5_0007747g0010 Nicotiana tabacum HOM05D005935 ORTHO05D007012 4.8e-37 158.7 123 83.7
CSS0031844 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 3.1e-36 156.0 122 71.3
CSS0034550 Camellia sinensis var. sinensis HOM05D005935 ORTHO05D007012 3.2e-33 146.0 208 59.6
Cre07.g341650 Chlamydomonas reinhardtii HOM05D005935 ORTHO05D007012 3.9e-31 139.0 233 48.5
CBR_g38440 Chara braunii HOM05D005935 ORTHO05D007012 5.1e-31 138.7 198 45.5
Actinidia35528 Actinidia chinensis HOM05D005935 ORTHO05D007012 2.4e-28 129.8 285 45.6
MCO03G264 Micromonas commoda HOM05D005935 ORTHO05D007012 5.2e-23 112.1 212 45.8
FAN04G2955 Fragaria x ananassa HOM05D005935 ORTHO05D007012 1.1e-22 110.9 153 45.1
Zm00001eb307900 Zea mays HOM05D005935 ORTHO05D007012 4.2e-17 92.4 96 72.9
PRCOL_00000245 Prasinoderma coloniale HOM05D005935 ORTHO05D007012 1.0e-15 87.8 203 37.4
Zm00001eb114570 Zea mays HOM05D005935 ORTHO05D007012 4.4e-14 82.4 91 72.5
Cfa024511 Carpinus fangiana HOM05D005935 ORTHO05D007012 2.0e-11 73.6 175 30.9
Zm00001eb180860 Zea mays HOM05D005935 ORTHO05D007012 5.5e-09 65.5 46 73.9


User provided reference genes

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