Gene: Zm00001eb121760

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb121760
  • Transcript Identifier Zm00001eb121760_T001
  • Gene Type Coding gene
  • Location 3 : 8492689-8495375 : positive

Gene Family Information

  • ID HOM05D005935
  • #Genes/#Species 132/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb121760_T001
  • pid Zm00001eb121760_P001
  • uniprot A0A3L6G317
  • uniprot A0A1D6MIA1
  • uniprot A0A3L6FH44
  • uniprot B4FS32
  • uniprot A0A1D6MI96
  • uniprot A0A1D6MI97
  • entrez 107275236
  • refseq NM_001320508.1
  • refseq NP_001307437.1
  • V4_identifier Zm00001d039541

Descriptions

  • Description Zm00001e016640
  • Description C2H2 and C2HC zinc fingers superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005681
IEA
InterProspliceosomal complex
GO:0046540
IBA
GOA DatabaseU4/U6 x U5 tri-snRNP complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022755 Zinc finger, double-stranded RNA binding
IPR036236 Zinc finger C2H2 superfamily
IPR003604 Matrin/U1-C-like, C2H2-type zinc finger
IPR040107 U4/U6.U5 small nuclear ribonucleoprotein component Snu23
Mapman id Description
16.2.1.5.2 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (SNU23)