Gene: Cc02_g34830

General Information

Structural Information

Species Coffea canephora
Gene Identifier Cc02_g34830
Transcript Identifier Cc02_g34830.1
Gene Type Coding gene
Location chr2 : 48386288-48389270 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005935
#Genes/#Species 132/95
Phylogenetic origin

ID ORTHO05D007012
#Genes/#Species 135/98
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

UniProtKB P34670
UniProtKB B4FS32
UniProtKB Q96NC0
UniProtKB I1GLA5
UniProtKB C5XM20
UniProtKB Q9CPW7
id GSCOCG00011790001

Descriptions

Short descriptions
Ortholog descriptions

Description Zinc finger matrin-type protein 2

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	IEA	InterPro	mRNA splicing, via spliceosome

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0008270	IEA	InterPro	zinc ion binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005681	IEA	InterPro	spliceosomal complex

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR022755	Zinc finger, double-stranded RNA binding
IPR036236	Zinc finger C2H2 superfamily
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger
IPR040107	U4/U6.U5 small nuclear ribonucleoprotein component Snu23

Mapman id	Description
16.2.1.5.2	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (SNU23)