Gene: FAN05G5324

General Information

Structural Information

Species Fragaria x ananassa
Gene Identifier FAN05G5324
Transcript Identifier FAN05G5324.1
Gene Type Coding gene
Location Fvb6-3 : 37453956-37456617 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005935
#Genes/#Species 132/95
Phylogenetic origin

ID ORTHO05D007012
#Genes/#Species 135/98
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id augustus_masked-Fvb6-3-processed-gene-374.13.v1.0.a1
pacid 50504053

Descriptions

Short descriptions
Ortholog descriptions

Description K12848 - U4/U6.U5 tri-snRNP component SNU23 (SNU23)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	IEA	InterPro	mRNA splicing, via spliceosome

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0008270	IEA	InterPro	zinc ion binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005681	IEA	InterPro	spliceosomal complex

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036236	Zinc finger C2H2 superfamily
IPR040107	U4/U6.U5 small nuclear ribonucleoprotein component Snu23
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger

Mapman id	Description
16.2.1.5.2	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (SNU23)