Gene: PGSC0003DMG400002806

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400002806
Transcript Identifier PGSC0003DMT400007289
Gene Type Coding gene
Location ST4.03ch01 : 78046541-78052101 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005935
#Genes/#Species 132/95
Phylogenetic origin

ID ORTHO05D007012
#Genes/#Species 135/98
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

pacid 37438813
id PGSC0003DMG400002806.v4.03
uniprot M0ZSR7

Descriptions

Short descriptions
Ortholog descriptions

Description Zinc finger protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	IBA IEA	GOA Database	mRNA splicing, via spliceosome
GO:0000398	IEA	InterPro	mRNA splicing, via spliceosome

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0008270	IEA	GOA Database	zinc ion binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0046872	IEA	GOA Database	metal ion binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005681	IEA	GOA Database	spliceosomal complex
GO:0005681	IEA	InterPro	spliceosomal complex
GO:0005634	IEA	GOA Database	nucleus
GO:0046540	IBA	GOA Database	U4/U6 x U5 tri-snRNP complex

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR040107	U4/U6.U5 small nuclear ribonucleoprotein component Snu23
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger
IPR022755	Zinc finger, double-stranded RNA binding
IPR036236	Zinc finger C2H2 superfamily

Mapman id	Description
16.2.1.5.2	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP).protein factor (SNU23)