Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.VMQ9AF Arachis hypogaea HOM05D001674 ORTHO05D005257 5.8e-95 350.9 179 100.0
arahy.Tifrunner.gnm1.ann1.H72Z00 Arachis hypogaea HOM05D003946 ORTHO05D005257 5.7e-34 148.3 95 84.2
Lj4g0019577 Lotus japonicus HOM05D001674 ORTHO05D005257 1.7e-33 146.7 213 46.5
Eucgr.H04132 Eucalyptus grandis HOM05D001674 ORTHO05D005257 8.2e-33 144.4 170 52.4
Glyma.13G118200 Glycine max HOM05D001674 ORTHO05D005257 2.4e-32 142.9 211 46.0
arahy.Tifrunner.gnm1.ann1.GZJK2B Arachis hypogaea HOM05D001674 ORTHO05D005257 3.1e-32 142.5 209 47.8
Glyma.17G041700 Glycine max HOM05D001674 ORTHO05D005257 3.1e-32 142.5 211 46.9
Manes.03G212800 Manihot esculenta HOM05D001674 ORTHO05D005257 4.1e-32 142.1 213 47.4
arahy.Tifrunner.gnm1.ann1.R8ERLJ Arachis hypogaea HOM05D001674 ORTHO05D005257 5.3e-32 141.7 215 47.0
Ca_21367_v3 Cicer arietinum L. HOM05D001674 ORTHO05D005257 1.2e-31 140.6 211 46.0
Lalb_Chr13g0299021 Lupinus albus HOM05D001674 ORTHO05D005257 1.5e-31 140.2 213 46.0
DCAR_026929 Daucus carota HOM05D001674 ORTHO05D005257 2.0e-31 139.8 177 50.3
Medtr4g124090 Medicago truncatula HOM05D001674 ORTHO05D005257 3.5e-31 139.0 211 46.4
PGR004G0096 Punica granatum HOM05D001674 ORTHO05D005257 4.5e-31 138.7 211 46.9
Prupe.1G103200 Prunus persica HOM05D001674 ORTHO05D005257 5.9e-31 138.3 213 45.5
COL.COLO4_28308 Corchorus olitorius HOM05D001674 ORTHO05D005257 1.0e-30 137.5 235 43.8
TPR.G12547 Trifolium pratense HOM05D001674 ORTHO05D005257 1.3e-30 137.1 211 44.5
VMungo1215G3338 Vigna mungo HOM05D001674 ORTHO05D005257 1.3e-30 137.1 211 45.0
ECA246G1105 Erigeron canadensis HOM05D001674 ORTHO05D005257 1.7e-30 136.7 211 45.0
FvH4_4g21690 Fragaria vesca HOM05D001674 ORTHO05D005257 1.7e-30 136.7 213 46.5
FAN17G2195 Fragaria x ananassa HOM05D001674 ORTHO05D005257 2.2e-30 136.3 213 46.5
GSVIVG01017700001 Vitis vinifera HOM05D001674 ORTHO05D005257 2.9e-30 136.0 211 44.5
CiPaw.01G127900 Carya illinoinensis HOM05D001674 ORTHO05D005257 3.8e-30 135.6 211 46.9
Dinv24721 Davidia involucrata HOM05D001674 ORTHO05D005257 3.8e-30 135.6 211 43.1
Gohir.A06G112800 Gossypium hirsutum HOM05D001674 ORTHO05D005257 3.8e-30 135.6 211 45.0
Gohir.D06G117500 Gossypium hirsutum HOM05D001674 ORTHO05D005257 3.8e-30 135.6 211 45.0
Gorai.010G135100 Gossypium raimondii HOM05D001674 ORTHO05D005257 3.8e-30 135.6 211 45.0
HanXRQChr05g0148951 Helianthus annuus HOM05D001674 ORTHO05D005257 3.8e-30 135.6 211 43.1
Phvul.003G123100 Phaseolus vulgaris HOM05D001674 ORTHO05D005257 3.8e-30 135.6 211 44.5
RcHm_v2.0_Chr4g0427901 Rosa chinensis HOM05D001674 ORTHO05D005257 5.0e-30 135.2 213 45.5
Thecc.05G189900 Theobroma cacao HOM05D001674 ORTHO05D005257 5.0e-30 135.2 211 43.6
CANSAT78G0587 Cannabis sativa HOM05D001674 ORTHO05D005257 6.5e-30 134.8 213 45.5
MD16G1134000 Malus domestica HOM05D001674 ORTHO05D005257 6.5e-30 134.8 211 44.5
Lj3C842G5 Lonicera japonica HOM05D001674 ORTHO05D005257 8.5e-30 134.4 211 43.6
unitig_8.g3632 Utricularia gibba HOM05D001674 ORTHO05D005257 8.5e-30 134.4 172 48.8
Psat0s1206g0200 Pisum sativum HOM05D001674 ORTHO05D005257 1.1e-29 134.0 212 42.9
Ciclev10004488m.g Citrus clementina HOM05D001674 ORTHO05D005257 1.5e-29 133.7 211 42.7
Potri.010G003300 Populus trichocarpa HOM05D001674 ORTHO05D005257 1.5e-29 133.7 210 42.4
Sc25g0001840 Simmondsia chinensis HOM05D001674 ORTHO05D005257 1.9e-29 133.3 210 43.8
MD13G1138200 Malus domestica HOM05D000021 ORTHO05D005257 2.5e-29 132.9 210 44.3
TAR362G1045 Trochodendron aralioides HOM05D001674 ORTHO05D005257 2.5e-29 132.9 213 43.7
SalBow6G2708 Salvia bowleyana HOM05D001674 ORTHO05D005257 4.2e-29 132.1 211 46.0
Solyc12g098860.2 Solanum lycopersicum HOM05D001674 ORTHO05D005257 4.2e-29 132.1 211 42.2
Sopen12g033610 Solanum pennellii HOM05D001674 ORTHO05D005257 4.2e-29 132.1 211 42.2
Lsat_1_v5_gn_6_118341 Lactuca sativa HOM05D001674 ORTHO05D005257 5.5e-29 131.7 211 42.7
ClCG05G006880 Citrullus lanatus HOM05D001674 ORTHO05D005257 7.2e-29 131.3 213 43.7
CAN.G484.96 Capsicum annuum HOM05D001674 ORTHO05D005257 9.4e-29 131.0 211 41.7
Nitab4.5_0000978g0050 Nicotiana tabacum HOM05D001674 ORTHO05D005257 9.4e-29 131.0 211 43.1
BcaC05g27587 Brassica carinata HOM05D001674 ORTHO05D005257 1.6e-28 130.2 211 43.1
A05p21130 Brassica napus HOM05D001674 ORTHO05D005257 1.6e-28 130.2 211 43.1
C05p35670 Brassica napus HOM05D001674 ORTHO05D005257 1.6e-28 130.2 211 43.1
TWI77G0300 Tripterygium wilfordii HOM05D001674 ORTHO05D005257 1.6e-28 130.2 211 44.5
Sed0007966 Sechium edule HOM05D001674 ORTHO05D005257 2.1e-28 129.8 213 43.7
Peaxi162Scf00323g00935 Petunia axillaris HOM05D001674 ORTHO05D005257 3.6e-28 129.0 211 42.7
MSTRG.22009 Avicennia marina HOM05D001674 ORTHO05D005257 4.7e-28 128.6 221 43.0
Cc03_g00030 Coffea canephora HOM05D001674 ORTHO05D005257 4.7e-28 128.6 232 41.4
THA.LOC104802617 Tarenaya hassleriana HOM05D001674 ORTHO05D005257 4.7e-28 128.6 211 43.1
Os07g0636200 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D005257 6.1e-28 128.3 221 39.8
Aa31LG10G5460 Aethionema arabicum HOM05D001674 ORTHO05D005257 1.0e-27 127.5 209 42.1
Actinidia18515 Actinidia chinensis HOM05D001674 ORTHO05D005257 1.4e-27 127.1 227 41.4
Zm00001eb328680 Zea mays HOM05D001674 ORTHO05D005257 1.4e-27 127.1 218 43.6
EL10Ac3g06234 Beta vulgaris HOM05D001674 ORTHO05D005257 1.8e-27 126.7 210 42.9
Thhalv10011287m.g Eutrema salsugineum HOM05D001674 ORTHO05D005257 1.8e-27 126.7 211 42.2
BcaB02g11412 Brassica carinata HOM05D001674 ORTHO05D005257 2.3e-27 126.3 211 41.7
Carub.0001s3744 Capsella rubella HOM05D001674 ORTHO05D005257 2.3e-27 126.3 211 42.7
CsaV3_3G015550 Cucumis sativus L. HOM05D001674 ORTHO05D005257 3.9e-27 125.6 215 42.3
Aqoxy2G02487 Aquilegia oxysepala HOM05D001674 ORTHO05D005257 5.2e-27 125.2 211 40.8
Haze_00754 Corylus avellana HOM05D001674 ORTHO05D005257 5.2e-27 125.2 230 40.9
Sp1g35260 Schrenkiella parvula HOM05D001674 ORTHO05D005257 5.2e-27 125.2 211 42.2
AT1G48310 Arabidopsis thaliana HOM05D001674 ORTHO05D005257 6.7e-27 124.8 211 41.7
Cfa015741 Carpinus fangiana HOM05D001674 ORTHO05D005257 6.7e-27 124.8 202 43.1
Migut.N03098 Erythranthe guttata HOM05D001674 ORTHO05D005257 6.7e-27 124.8 211 40.3
ATR0796G053 Amborella trichopoda HOM05D001674 ORTHO05D005257 1.1e-26 124.0 213 40.4
Ah.07g203550 Amaranthus hybridus HOM05D001674 ORTHO05D005257 1.5e-26 123.6 212 41.0
CDE11G0774 Ceratophyllum demersum HOM05D001674 ORTHO05D005257 2.6e-26 122.9 181 45.9
MELO3C006754.2 Cucumis melo HOM05D001674 ORTHO05D005257 2.6e-26 122.9 176 44.3
PSO170G0915 Papaver somniferum HOM05D001674 ORTHO05D005257 4.4e-26 122.1 211 40.8
AL1G54910 Arabidopsis lyrata HOM05D001674 ORTHO05D005257 9.7e-26 120.9 209 41.1
CSS0042912 Camellia sinensis var. sinensis HOM05D001674 ORTHO05D005257 9.7e-26 120.9 198 43.4
Nitab4.5_0012375g0010 Nicotiana tabacum HOM05D001674 ORTHO05D005257 1.3e-25 120.6 228 39.9
PSO445G0012 Papaver somniferum HOM05D001674 ORTHO05D005257 1.3e-25 120.6 211 42.2
Duzib235G1161 Durio zibethinus HOM05D001674 ORTHO05D005257 6.3e-25 118.2 170 45.9
AUR62023654 Chenopodium quinoa HOM05D001674 ORTHO05D005257 1.8e-24 116.7 178 45.5
vmacro08016 Vaccinium macrocarpon HOM05D001674 ORTHO05D005257 5.3e-24 115.2 202 41.6
AUR62002539 Chenopodium quinoa HOM05D001674 ORTHO05D005257 1.0e-22 110.9 229 39.3
SMO364G0824 Selaginella moellendorffii HOM05D001674 ORTHO05D005257 3.8e-22 109.0 213 35.2
Pp3c16_16990 Physcomitrium patens HOM05D001674 ORTHO05D005257 6.5e-22 108.2 218 39.9
Mapoly0113s0030 Marchantia polymorpha HOM05D000104 ORTHO05D005257 4.2e-21 105.5 209 37.8
Rhsim04G0249200 Rhododendron simsii HOM05D001674 ORTHO05D005257 4.0e-19 99.0 184 40.8
BolC5t32283H Brassica oleracea HOM05D001674 ORTHO05D005257 2.0e-18 96.7 87 63.2
BraA05t21018Z Brassica rapa HOM05D001674 ORTHO05D005257 2.0e-18 96.7 87 63.2
MBI19_g30290_MAGBIO Magnolia biondii HOM05D001674 ORTHO05D005257 3.4e-18 95.9 87 62.1
FAN12G1186 Fragaria x ananassa HOM05D001674 ORTHO05D005257 9.8e-18 94.4 87 62.1
QL06p014511 Quercus lobata HOM05D001674 ORTHO05D005257 9.8e-18 94.4 87 59.8
Oeu002203.3 Olea europaea HOM05D001674 ORTHO05D005257 1.7e-17 93.6 94 58.5
Atru.chr4.3178 Acer truncatum HOM05D001674 ORTHO05D005257 8.3e-17 91.3 87 58.6
CARHR037930 Cardamine hirsuta HOM05D001674 ORTHO05D005257 8.3e-17 91.3 87 59.8
HPP92_020541 Vanilla planifolia HOM05D001674 ORTHO05D005257 3.8e-14 82.4 127 42.5
SGA_v2.0_scaffold322G48597 Striga asiatica HOM05D001674 ORTHO05D005257 1.5e-13 80.5 255 31.0
CBR_g29672 Chara braunii HOM05D001674 ORTHO05D005257 6.1e-12 75.1 265 27.9
PRCOL_00002706 Prasinoderma coloniale HOM05D000104 ORTHO05D005257 6.1e-12 75.1 205 34.1
Cpa.g.sc146.11 Carica papaya HOM05D001674 ORTHO05D005257 1.8e-11 73.6 46 78.3
MCO12G185 Micromonas commoda HOM05D000104 ORTHO05D005257 1.8e-11 73.6 196 31.1
MD13G1156900 Malus domestica HOM05D001674 ORTHO05D005257 1.2e-10 70.9 45 77.8
Psat0s3354g0080 Pisum sativum HOM05D000518 ORTHO05D000737 7.5e-10 68.2 52 65.4
Peaxi162Scf00201g00024 Petunia axillaris HOM05D001674 ORTHO05D008374 8.3e-09 64.7 194 31.4
DCAR_026940 Daucus carota HOM05D001674 ORTHO05D005257 2.4e-08 63.2 47 66.0
ATR0064G032 Amborella trichopoda HOM05D001674 ORTHO05D008374 4.1e-08 62.4 228 28.1
Nn4g23350 Nelumbo nucifera HOM05D001674 ORTHO05D008374 1.2e-07 60.8 229 27.1
PRCOL_00003770 Prasinoderma coloniale HOM05D001674 ORTHO05D008374 1.2e-07 60.8 219 28.3
PSO017G4168 Papaver somniferum HOM05D001674 ORTHO05D008374 1.6e-07 60.5 224 26.3
Lj1g0003467 Lotus japonicus HOM05D001674 ORTHO05D008374 2.0e-07 60.1 226 28.3
Psat5g198440 Pisum sativum HOM05D001674 ORTHO05D008374 2.0e-07 60.1 225 28.4
Cfa019293 Carpinus fangiana HOM05D001674 ORTHO05D008374 2.7e-07 59.7 233 27.9
Lsat_1_v5_gn_5_21720 Lactuca sativa HOM05D001674 ORTHO05D008374 2.7e-07 59.7 217 31.3
Sed0002195 Sechium edule HOM05D001674 ORTHO05D008374 2.7e-07 59.7 213 29.1
AagrBONN_evm.TU.Sc2ySwM_117.3709 Anthoceros agrestis HOM05D001674 ORTHO05D008374 4.5e-07 58.9 204 27.9
SMO358G0589 Selaginella moellendorffii HOM05D001674 ORTHO05D008374 4.5e-07 58.9 226 29.2
TPR.G12256 Trifolium pratense HOM05D001674 ORTHO05D008374 4.5e-07 58.9 225 27.6
CDE04G0389 Ceratophyllum demersum HOM05D001674 ORTHO05D008374 5.9e-07 58.5 213 30.0
TWI15G0866 Tripterygium wilfordii HOM05D001674 ORTHO05D008374 5.9e-07 58.5 233 26.6
arahy.Tifrunner.gnm1.ann1.1X400K Arachis hypogaea HOM05D001674 ORTHO05D008374 1.0e-06 57.8 213 28.2
Cre03.g199350 Chlamydomonas reinhardtii HOM05D000104 ORTHO05D005257 1.0e-06 57.8 201 28.4
Lalb_Chr22g0355251 Lupinus albus HOM05D001674 ORTHO05D008374 1.0e-06 57.8 235 26.4
CANSAT80G0757 Cannabis sativa HOM05D001674 ORTHO05D008374 1.3e-06 57.4 224 26.8
Gohir.A03G068966 Gossypium hirsutum HOM05D001674 ORTHO05D008374 1.7e-06 57.0 222 27.0
SEGI_26199 Sequoiadendron giganteum HOM05D001674 ORTHO05D005257 1.7e-06 57.0 40 62.5
Phvul.009G190731 Phaseolus vulgaris HOM05D001674 ORTHO05D008374 2.3e-06 56.6 224 27.2
SalBow7G3861 Salvia bowleyana HOM05D001674 ORTHO05D008374 2.3e-06 56.6 223 26.5
CiPaw.11G049400 Carya illinoinensis HOM05D001674 ORTHO05D008374 2.9e-06 56.2 232 27.2
ClCG06G015870 Citrullus lanatus HOM05D001674 ORTHO05D008374 2.9e-06 56.2 213 29.1
Eucgr.B00565 Eucalyptus grandis HOM05D001674 ORTHO05D008374 2.9e-06 56.2 231 26.8
Potri.012G067000 Populus trichocarpa HOM05D001674 ORTHO05D008374 2.9e-06 56.2 224 27.2
CsaV3_1G002690 Cucumis sativus L. HOM05D001674 ORTHO05D008374 3.8e-06 55.8 225 27.6
Migut.D01671 Erythranthe guttata HOM05D001674 ORTHO05D008374 5.0e-06 55.5 231 26.8
PGR083G1883 Punica granatum HOM05D001674 ORTHO05D008374 6.6e-06 55.1 234 24.8
THA.LOC104818327 Tarenaya hassleriana HOM05D001674 ORTHO05D008374 6.6e-06 55.1 228 28.1
HanXRQChr14g0426861 Helianthus annuus HOM05D001674 ORTHO05D008374 8.6e-06 54.7 226 28.8


User provided reference genes

Program Settings