Gene: COL.COLO4_28308
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_28308
- Transcript Identifier COL.rna27026
- Gene Type Coding gene
- Location AWUE01019829.1 : 19372-26045 : positive
Gene Family Information
- ID HOM05D001674
- #Genes/#Species 386/100
- Phylogenetic origin
- ID ORTHO05D005257
- #Genes/#Species 161/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna27026
- GenBank OMO71315.1
- id gene28280
- gene_name COLO4_28308
- uniprot A0A1R3HLU5
Descriptions
- Description SNF2-related protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | GOA Database | DNA repair | |
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0031297 | IEA | GOA Database | replication fork processing | |
| GO:0031297 | IEA | InterPro | replication fork processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | GOA Database | nucleosome-dependent ATPase activity | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity | |
| GO:0036310 | IEA | GOA Database | annealing activity | |
| GO:0036310 | IEA | InterPro | annealing activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000330 | SNF2, N-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR030101 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 |
| IPR001650 | Helicase, C-terminal |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |