Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
arahy.Tifrunner.gnm1.ann1.NNND2U Arachis hypogaea HOM05D004526 ORTHO05D005548 1.6e-112 409.5 207 100.0
arahy.Tifrunner.gnm1.ann1.31SG4H Arachis hypogaea HOM05D004526 ORTHO05D005548 2.2e-69 266.2 305 56.7
arahy.Tifrunner.gnm1.ann1.S1RF4U Arachis hypogaea HOM05D004526 ORTHO05D005548 2.2e-69 266.2 305 56.7
arahy.Tifrunner.gnm1.ann1.PC3EEW Arachis hypogaea HOM05D004526 ORTHO05D005548 1.1e-68 263.8 305 56.1
arahy.Tifrunner.gnm1.ann1.C6A6VI Arachis hypogaea HOM05D004526 ORTHO05D005548 4.0e-63 245.4 303 53.8
Ca_11340_v3 Cicer arietinum L. HOM05D004526 ORTHO05D005548 1.1e-57 227.3 211 64.0
Cfa007509 Carpinus fangiana HOM05D004526 ORTHO05D005548 1.6e-56 223.4 212 63.7
Haze_14584 Corylus avellana HOM05D004526 ORTHO05D005548 1.6e-56 223.4 212 63.7
VMungo0720G0008 Vigna mungo HOM05D004526 ORTHO05D005548 1.6e-56 223.4 211 63.5
Glyma.10G292700 Glycine max HOM05D004526 ORTHO05D005548 2.1e-56 223.0 211 63.0
Phvul.007G007300 Phaseolus vulgaris HOM05D004526 ORTHO05D005548 2.1e-56 223.0 211 63.5
Glyma.20G242900 Glycine max HOM05D004526 ORTHO05D005548 4.7e-56 221.9 211 62.6
CiPaw.03G030200 Carya illinoinensis HOM05D004526 ORTHO05D005548 8.0e-56 221.1 212 62.3
Hund13244 Selenicereus undatus HOM05D004526 ORTHO05D005548 8.0e-56 221.1 211 63.0
Lj5g0010112 Lotus japonicus HOM05D004526 ORTHO05D004861 1.8e-55 219.9 212 61.3
Manes.17G021000 Manihot esculenta HOM05D004526 ORTHO05D005548 3.0e-55 219.2 212 61.8
TAR481G0009 Trochodendron aralioides HOM05D004526 ORTHO05D005548 3.0e-55 219.2 216 60.6
CsaV3_5G037880 Cucumis sativus L. HOM05D004526 ORTHO05D005548 8.8e-55 217.6 212 61.8
Medtr1g116060 Medicago truncatula HOM05D004526 ORTHO05D005548 8.8e-55 217.6 215 60.9
Psat6g239400 Pisum sativum HOM05D004526 ORTHO05D005548 8.8e-55 217.6 211 62.1
Ciclev10011737m.g Citrus clementina HOM05D004526 ORTHO05D005548 1.2e-54 217.2 212 61.8
COL.COLO4_25181 Corchorus olitorius HOM05D004526 ORTHO05D005548 1.2e-54 217.2 212 62.7
Atru.chr8.1914 Acer truncatum HOM05D004526 ORTHO05D005548 1.5e-54 216.9 212 61.8
CiPaw.04G020200 Carya illinoinensis HOM05D004526 ORTHO05D005548 1.5e-54 216.9 212 61.3
MELO3C021974.2 Cucumis melo HOM05D004526 ORTHO05D005548 1.5e-54 216.9 212 61.3
Dinv07025 Davidia involucrata HOM05D004526 ORTHO05D005548 3.4e-54 215.7 214 62.6
TAR622G0275 Trochodendron aralioides HOM05D004526 ORTHO05D005548 4.4e-54 215.3 212 61.8
GSVIVG01032607001 Vitis vinifera HOM05D004526 ORTHO05D005548 4.4e-54 215.3 211 61.1
ClCG09G018400 Citrullus lanatus HOM05D004526 ORTHO05D005548 9.8e-54 214.2 213 62.0
EL10Ac2g02933 Beta vulgaris HOM05D004526 ORTHO05D005548 1.3e-53 213.8 211 61.6
Gohir.A05G364100 Gossypium hirsutum HOM05D004526 ORTHO05D005548 1.3e-53 213.8 212 60.8
Gohir.D04G050600 Gossypium hirsutum HOM05D004526 ORTHO05D005548 1.3e-53 213.8 212 60.8
Gorai.012G056100 Gossypium raimondii HOM05D004526 ORTHO05D005548 1.3e-53 213.8 212 60.8
Lalb_Chr21g0307111 Lupinus albus HOM05D004526 ORTHO05D005548 1.7e-53 213.4 211 59.7
TWI60G0005 Tripterygium wilfordii HOM05D004526 ORTHO05D005548 2.2e-53 213.0 212 60.8
Duzib147G0459 Durio zibethinus HOM05D004526 ORTHO05D005548 2.8e-53 212.6 212 61.8
DCAR_021672 Daucus carota HOM05D004526 ORTHO05D005548 4.8e-53 211.8 213 61.5
Nn4g23045 Nelumbo nucifera HOM05D004526 ORTHO05D005548 4.8e-53 211.8 192 62.0
QL02p080561 Quercus lobata HOM05D004526 ORTHO05D005548 4.8e-53 211.8 217 59.9
Sed0004091 Sechium edule HOM05D004526 ORTHO05D005548 4.8e-53 211.8 212 60.8
Aa31LG5G15080 Aethionema arabicum HOM05D004526 ORTHO05D005548 6.3e-53 211.5 212 58.0
THA.LOC104811064 Tarenaya hassleriana HOM05D004526 ORTHO05D005548 1.1e-52 210.7 212 60.4
Potri.017G077200 Populus trichocarpa HOM05D004526 ORTHO05D005548 1.8e-52 209.9 212 60.8
Thecc.04G074400 Theobroma cacao HOM05D004526 ORTHO05D005548 1.8e-52 209.9 212 60.8
Lj7A401T78 Lonicera japonica HOM05D004526 ORTHO05D005548 3.1e-52 209.1 211 61.1
arahy.Tifrunner.gnm1.ann1.QUI3Q9 Arachis hypogaea HOM05D004526 ORTHO05D005548 5.4e-52 208.4 195 65.6
Lsat_1_v5_gn_4_176840 Lactuca sativa HOM05D004526 ORTHO05D005548 5.4e-52 208.4 211 60.2
CSS0019571 Camellia sinensis var. sinensis HOM05D004526 ORTHO05D005548 7.0e-52 208.0 214 60.3
Nn3g17130 Nelumbo nucifera HOM05D004526 ORTHO05D005548 9.1e-52 207.6 214 59.8
Sc11g0006930 Simmondsia chinensis HOM05D004526 ORTHO05D005548 9.1e-52 207.6 212 59.0
AUR62031643 Chenopodium quinoa HOM05D004526 ORTHO05D005548 1.2e-51 207.2 211 60.7
HanXRQChr09g0265571 Helianthus annuus HOM05D004526 ORTHO05D005548 1.2e-51 207.2 211 59.7
CAN.G226.26 Capsicum annuum HOM05D004526 ORTHO05D005548 2.0e-51 206.5 216 57.4
AUR62038875 Chenopodium quinoa HOM05D004526 ORTHO05D005548 2.0e-51 206.5 211 60.7
Cc08_g10980 Coffea canephora HOM05D004526 ORTHO05D005548 2.0e-51 206.5 211 59.7
PSO478G0915 Papaver somniferum HOM05D004526 ORTHO05D005548 2.0e-51 206.5 231 55.8
Prupe.3G272100 Prunus persica HOM05D004526 ORTHO05D005548 3.5e-51 205.7 214 60.3
Eucgr.I01917 Eucalyptus grandis HOM05D004526 ORTHO05D005548 4.5e-51 205.3 212 60.8
Nitab4.5_0000157g0090 Nicotiana tabacum HOM05D004526 ORTHO05D005548 5.9e-51 204.9 212 58.0
SalBow1G4721 Salvia bowleyana HOM05D004526 ORTHO05D005548 5.9e-51 204.9 212 59.4
PSO017G3834 Papaver somniferum HOM05D004526 ORTHO05D005548 7.7e-51 204.5 213 58.2
Actinidia06070 Actinidia chinensis HOM05D004526 ORTHO05D005548 1.0e-50 204.1 214 60.7
PGSC0003DMG400030284 Solanum tuberosum HOM05D004526 ORTHO05D005548 1.0e-50 204.1 216 56.9
CSS0037061 Camellia sinensis var. sinensis HOM05D004526 ORTHO05D005548 1.7e-50 203.4 211 59.7
FvH4_6g49260 Fragaria vesca HOM05D004526 ORTHO05D005548 1.7e-50 203.4 214 58.4
BcaB04g19307 Brassica carinata HOM05D004526 ORTHO05D005548 2.3e-50 203.0 211 57.3
Nitab4.5_0001504g0050 Nicotiana tabacum HOM05D004526 ORTHO05D005548 2.3e-50 203.0 216 56.5
RcHm_v2.0_Chr2g0169161 Rosa chinensis HOM05D004526 ORTHO05D005548 2.3e-50 203.0 214 58.9
RhsimUnG0055200 Rhododendron simsii HOM05D004526 ORTHO05D005548 2.9e-50 202.6 212 58.5
Solyc01g009290.4 Solanum lycopersicum HOM05D004526 ORTHO05D005548 2.9e-50 202.6 216 56.5
Sopen01g004780 Solanum pennellii HOM05D004526 ORTHO05D005548 2.9e-50 202.6 216 56.5
Dinv06512 Davidia involucrata HOM05D004526 ORTHO05D005548 3.8e-50 202.2 212 59.4
HanXRQChr12g0357441 Helianthus annuus HOM05D004526 ORTHO05D005548 5.0e-50 201.8 211 58.8
Aqoxy3G03268 Aquilegia oxysepala HOM05D004526 ORTHO05D005548 6.5e-50 201.4 217 57.6
Migut.E01591 Erythranthe guttata HOM05D004526 ORTHO05D005548 6.5e-50 201.4 212 58.5
FAN02G4162 Fragaria x ananassa HOM05D004526 ORTHO05D005548 6.5e-50 201.4 214 58.4
MSTRG.1703 Avicennia marina HOM05D004526 ORTHO05D005548 8.6e-50 201.1 212 59.0
Sp3g03530 Schrenkiella parvula HOM05D004526 ORTHO05D005548 8.6e-50 201.1 212 57.5
BcaC01g04355 Brassica carinata HOM05D004526 ORTHO05D005548 1.5e-49 200.3 211 56.9
A03p33780 Brassica napus HOM05D004526 ORTHO05D005548 1.5e-49 200.3 211 56.9
C03p41080 Brassica napus HOM05D004526 ORTHO05D005548 1.5e-49 200.3 211 56.9
BolC3t16397H Brassica oleracea HOM05D004526 ORTHO05D005548 1.5e-49 200.3 211 56.9
BraA03t12552Z Brassica rapa HOM05D004526 ORTHO05D005548 1.5e-49 200.3 211 56.9
ATR0051G026 Amborella trichopoda HOM05D004526 ORTHO05D005548 2.5e-49 199.5 225 56.0
CDE04G0248 Ceratophyllum demersum HOM05D004526 ORTHO05D005548 2.5e-49 199.5 216 54.6
CARHR078910 Cardamine hirsuta HOM05D004526 ORTHO05D005548 4.2e-49 198.7 212 56.6
PSO591G0197 Papaver somniferum HOM05D004526 ORTHO05D005548 7.2e-49 198.0 212 56.1
unitig_578.g15969 Utricularia gibba HOM05D004526 ORTHO05D005548 9.5e-49 197.6 231 53.2
PSO832G1140 Papaver somniferum HOM05D004526 ORTHO05D005548 1.6e-48 196.8 304 45.1
Peaxi162Scf00345g00811 Petunia axillaris HOM05D004526 ORTHO05D005548 1.6e-48 196.8 212 57.5
FAN09G4881 Fragaria x ananassa HOM05D004526 ORTHO05D005548 2.1e-48 196.4 232 53.9
MD09G1046200 Malus domestica HOM05D004526 ORTHO05D005548 3.6e-48 195.7 230 53.9
MD17G1047000 Malus domestica HOM05D004526 ORTHO05D005548 3.6e-48 195.7 212 57.1
arahy.Tifrunner.gnm1.ann1.9G88ZW Arachis hypogaea HOM05D004526 ORTHO05D005548 4.7e-48 195.3 175 66.3
Thhalv10020725m.g Eutrema salsugineum HOM05D004526 ORTHO05D005548 4.7e-48 195.3 212 56.6
FAN05G4948 Fragaria x ananassa HOM05D004526 ORTHO05D005548 4.7e-48 195.3 232 53.4
FAN14G2223 Fragaria x ananassa HOM05D004526 ORTHO05D005548 4.7e-48 195.3 232 53.9
PGR142G4111 Punica granatum HOM05D004526 ORTHO05D005548 6.1e-48 194.9 222 56.8
HPP92_012836 Vanilla planifolia HOM05D004526 ORTHO05D005548 6.1e-48 194.9 229 53.3
Carub.0003s0384 Capsella rubella HOM05D004526 ORTHO05D005548 1.0e-47 194.1 211 55.9
AL3G14740 Arabidopsis lyrata HOM05D004526 ORTHO05D005548 1.4e-47 193.7 211 55.5
ECA232G3358 Erigeron canadensis HOM05D004526 ORTHO05D005548 3.0e-47 192.6 211 55.5
PGR142G2860 Punica granatum HOM05D004526 ORTHO05D005548 3.0e-47 192.6 222 56.3
SEGI_10762 Sequoiadendron giganteum HOM05D004526 ORTHO05D005548 3.0e-47 192.6 216 52.8
TAR305G0002 Trochodendron aralioides HOM05D004526 ORTHO05D005548 1.5e-46 190.3 199 58.3
AT3G04680 Arabidopsis thaliana HOM05D004526 ORTHO05D005548 2.0e-46 189.9 211 54.5
Oeu018626.2 Olea europaea HOM05D004526 ORTHO05D005548 5.7e-46 188.3 249 50.6
Sabra17G0069000 Salix brachista HOM05D004526 ORTHO05D005548 6.3e-45 184.9 267 49.1
Zm00001eb205260 Zea mays HOM05D004526 ORTHO05D005548 5.9e-43 178.3 222 51.8
Mapoly0016s0080 Marchantia polymorpha HOM05D004526 ORTHO05D005548 1.0e-42 177.6 230 49.1
Pp3c21_6910 Physcomitrium patens HOM05D004526 ORTHO05D005548 1.9e-41 173.3 212 50.0
Os02g0217500 Oryza sativa ssp. japonica HOM05D004526 ORTHO05D005548 3.3e-41 172.6 220 50.0
SMO165G0052 Selaginella moellendorffii HOM05D004526 ORTHO05D005548 3.3e-41 172.6 219 49.3
BcaC08g43036 Brassica carinata HOM05D004526 ORTHO05D005548 5.6e-41 171.8 192 51.0
C06p02960 Brassica napus HOM05D004526 ORTHO05D005548 2.1e-40 169.9 253 43.9
BolC6t35419H Brassica oleracea HOM05D004526 ORTHO05D005548 2.1e-40 169.9 253 43.9
Sp1g35350 Schrenkiella parvula HOM05D004526 ORTHO05D005548 2.1e-40 169.9 215 50.7
HPP92_009728 Vanilla planifolia HOM05D004526 ORTHO05D005548 4.7e-40 168.7 225 47.6
MD09G1046500 Malus domestica HOM05D004526 ORTHO05D005548 2.3e-39 166.4 207 51.7
AagrBONN_evm.TU.Sc2ySwM_344.3939 Anthoceros agrestis HOM05D004526 ORTHO05D005548 6.8e-39 164.9 238 46.6
vmacro05738 Vaccinium macrocarpon HOM05D004526 ORTHO05D005548 2.6e-38 162.9 178 56.7
SHI08813 Sapria himalayana HOM05D004526 ORTHO05D005548 4.4e-38 162.2 190 51.1
CBR_g42172 Chara braunii HOM05D004526 ORTHO05D005548 2.0e-35 153.3 235 43.0
Cfa007708 Carpinus fangiana HOM05D004526 ORTHO05D005548 3.3e-33 146.0 246 43.1
BcaB06g27742 Brassica carinata HOM05D004526 ORTHO05D005548 2.3e-31 139.8 214 44.9
BcaC02g08842 Brassica carinata HOM05D004526 ORTHO05D005548 4.4e-30 135.6 212 44.3
C04p49900 Brassica napus HOM05D004526 ORTHO05D005548 5.8e-30 135.2 212 42.9
AL7G50210 Arabidopsis lyrata HOM05D004526 ORTHO05D005548 9.8e-30 134.4 215 41.9
A04p15620 Brassica napus HOM05D004526 ORTHO05D005548 2.9e-29 132.9 212 43.4
BraA04t17197Z Brassica rapa HOM05D004526 ORTHO05D005548 2.9e-29 132.9 212 43.4
Actinidia23573 Actinidia chinensis HOM05D004526 ORTHO05D005548 1.1e-28 131.0 82 80.5
Actinidia27487 Actinidia chinensis HOM05D004526 ORTHO05D005548 3.5e-27 125.9 132 57.6
BcaB07g33761 Brassica carinata HOM05D004526 ORTHO05D005548 6.0e-27 125.2 110 59.1
PRCOL_00003252 Prasinoderma coloniale HOM05D004526 ORTHO05D005548 1.7e-26 123.6 217 39.2
AT5G39930 Arabidopsis thaliana HOM05D004526 ORTHO05D005548 3.0e-26 122.9 212 40.6
Carub.0007s3580 Capsella rubella HOM05D004526 ORTHO05D005548 1.1e-25 120.9 132 50.0
Thhalv10028283m.g Eutrema salsugineum HOM05D004526 ORTHO05D005548 5.6e-25 118.6 182 43.4
Cre03.g194800 Chlamydomonas reinhardtii HOM05D004526 ORTHO05D005548 7.3e-25 118.2 215 37.7
CARHR262250 Cardamine hirsuta HOM05D004526 ORTHO05D005548 9.5e-25 117.9 220 38.6
SpUn0485_0020 Schrenkiella parvula HOM05D004526 ORTHO05D005548 2.3e-23 113.2 184 40.8
MCO09G184 Micromonas commoda HOM05D004526 ORTHO05D005548 8.9e-23 111.3 224 38.4
arahy.Tifrunner.gnm1.ann1.HJC8LN Arachis hypogaea HOM05D004526 ORTHO05D005548 1.3e-21 107.5 131 54.2
BolC4t26581H Brassica oleracea HOM05D004526 ORTHO05D005548 1.3e-21 107.5 207 40.6
TAR629G3114 Trochodendron aralioides HOM05D004526 ORTHO05D002794 1.6e-19 100.5 55 89.1
Cpa.g.c42185 Carica papaya HOM05D004526 ORTHO05D005548 1.1e-17 94.4 61 80.3
Sp7g01800 Schrenkiella parvula HOM05D004526 ORTHO05D005548 1.9e-17 93.6 205 32.7
TPR.G10385 Trifolium pratense HOM05D004526 ORTHO05D005548 2.4e-12 76.6 53 81.1
AUR62010753 Chenopodium quinoa HOM05D004526 ORTHO05D005548 4.0e-07 59.3 50 70.0


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