Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb016860 Zea mays HOM05D001061 ORTHO05D006881 0.0e+00 1143.3 604 100.0
Zm00001eb079080 Zea mays HOM05D001061 ORTHO05D006881 7.0e-278 960.3 603 87.2
Zm00001eb326520 Zea mays HOM05D001061 ORTHO05D006881 8.7e-119 431.8 335 68.7
Os05g0274200 Oryza sativa ssp. japonica HOM05D001061 ORTHO05D006881 4.0e-116 422.9 335 67.8
Nn4g23718 Nelumbo nucifera HOM05D001061 ORTHO05D006881 6.7e-103 379.0 335 59.4
PSO063G4650 Papaver somniferum HOM05D001061 ORTHO05D006881 5.7e-102 375.9 335 59.7
Aqoxy3G03903 Aquilegia oxysepala HOM05D001061 ORTHO05D006881 1.3e-101 374.8 328 60.4
Manes.01G020600 Manihot esculenta HOM05D001061 ORTHO05D006881 4.8e-101 372.9 342 58.5
PSO782G4375 Papaver somniferum HOM05D001061 ORTHO05D006881 4.8e-101 372.9 335 59.7
GSVIVG01008235001 Vitis vinifera HOM05D001061 ORTHO05D006881 1.8e-100 370.9 342 57.9
TAR622G0643 Trochodendron aralioides HOM05D001061 ORTHO05D006881 5.3e-100 369.4 328 59.1
Potri.012G060000 Populus trichocarpa HOM05D001061 ORTHO05D006881 9.0e-100 368.6 335 58.2
Haze_18615 Corylus avellana HOM05D001061 ORTHO05D006881 1.5e-99 367.9 335 58.5
TWI15G0827 Tripterygium wilfordii HOM05D001061 ORTHO05D006881 2.0e-99 367.5 335 57.9
QL10p022714 Quercus lobata HOM05D001061 ORTHO05D006881 2.6e-99 367.1 342 57.9
MD06G1211200 Malus domestica HOM05D001061 ORTHO05D006881 4.5e-99 366.3 325 58.8
Duzib205G1584 Durio zibethinus HOM05D001061 ORTHO05D006881 5.9e-99 365.9 335 57.6
CSS0050177 Camellia sinensis var. sinensis HOM05D001061 ORTHO05D006881 7.7e-99 365.5 342 57.3
Ca_02537_v3 Cicer arietinum L. HOM05D001061 ORTHO05D006881 7.7e-99 365.5 335 58.5
Eucgr.B00700 Eucalyptus grandis HOM05D001061 ORTHO05D006881 7.7e-99 365.5 342 56.1
arahy.Tifrunner.gnm1.ann1.ERX1RE Arachis hypogaea HOM05D001061 ORTHO05D006881 1.3e-98 364.8 335 57.9
arahy.Tifrunner.gnm1.ann1.J2PRY0 Arachis hypogaea HOM05D001061 ORTHO05D006881 1.3e-98 364.8 335 57.9
Ciclev10018746m.g Citrus clementina HOM05D001061 ORTHO05D006881 1.3e-98 364.8 342 57.0
Prupe.5G217300 Prunus persica HOM05D001061 ORTHO05D006881 1.3e-98 364.8 318 59.4
RcHm_v2.0_Chr7g0184631 Rosa chinensis HOM05D001061 ORTHO05D006881 1.7e-98 364.4 342 57.0
Cc04_g07520 Coffea canephora HOM05D001061 ORTHO05D006881 2.9e-98 363.6 335 57.3
FvH4_5g12700 Fragaria vesca HOM05D001061 ORTHO05D006881 2.9e-98 363.6 325 58.8
FAN18G1105 Fragaria x ananassa HOM05D001061 ORTHO05D006881 2.9e-98 363.6 325 58.8
FAN18G1805 Fragaria x ananassa HOM05D001061 ORTHO05D006881 2.9e-98 363.6 325 58.8
Lalb_Chr12g0197571 Lupinus albus HOM05D001061 ORTHO05D006881 2.9e-98 363.6 335 57.0
FAN13G0485 Fragaria x ananassa HOM05D002339 ORTHO05D006881 5.0e-98 362.8 325 58.5
Actinidia31031 Actinidia chinensis HOM05D001061 ORTHO05D006881 6.5e-98 362.5 342 57.0
PGR083G2045 Punica granatum HOM05D001061 ORTHO05D006881 6.5e-98 362.5 342 56.4
Solyc06g069230.3 Solanum lycopersicum HOM05D001061 ORTHO05D006881 6.5e-98 362.5 337 57.3
FAN08G1716 Fragaria x ananassa HOM05D001061 ORTHO05D006881 1.4e-97 361.3 335 57.0
MD14G1221900 Malus domestica HOM05D001061 ORTHO05D006881 1.4e-97 361.3 325 58.2
TPR.G26764 Trifolium pratense HOM05D001061 ORTHO05D006881 1.4e-97 361.3 335 57.6
Medtr4g111945 Medicago truncatula HOM05D001061 ORTHO05D006881 2.5e-97 360.5 335 57.9
Lalb_Chr13g0302331 Lupinus albus HOM05D001061 ORTHO05D006881 3.2e-97 360.1 342 55.6
Oeu031818.1 Olea europaea HOM05D001061 ORTHO05D006881 4.2e-97 359.8 334 56.0
Glyma.17G121400 Glycine max HOM05D001061 ORTHO05D006881 7.2e-97 359.0 342 56.4
Hma1.2p1_0340F.1_g129890 Hydrangea macrophylla HOM05D001061 ORTHO05D006881 9.4e-97 358.6 342 56.1
Hund09999 Selenicereus undatus HOM05D001061 ORTHO05D006881 1.2e-96 358.2 335 54.3
CANSAT80G1355 Cannabis sativa HOM05D001061 ORTHO05D006881 1.6e-96 357.8 318 58.8
Sopen06g026490 Solanum pennellii HOM05D001061 ORTHO05D006881 2.1e-96 357.5 337 56.4
COL.COLO4_22718 Corchorus olitorius HOM05D001061 ORTHO05D006881 2.7e-96 357.1 335 56.7
Lj4g0007114 Lotus japonicus HOM05D001061 ORTHO05D006881 2.7e-96 357.1 318 59.4
Lj5C145G2 Lonicera japonica HOM05D001061 ORTHO05D006881 3.6e-96 356.7 342 56.4
Thecc.03G028100 Theobroma cacao HOM05D001061 ORTHO05D006881 3.6e-96 356.7 335 56.7
ATR0681G268 Amborella trichopoda HOM05D001061 ORTHO05D006881 4.6e-96 356.3 335 55.8
CsaV3_1G003630 Cucumis sativus L. HOM05D001061 ORTHO05D006881 4.6e-96 356.3 325 58.2
Gohir.A09G046500 Gossypium hirsutum HOM05D001061 ORTHO05D006881 4.6e-96 356.3 335 56.7
Phvul.003G177100 Phaseolus vulgaris HOM05D001061 ORTHO05D006881 4.6e-96 356.3 342 55.3
MELO3C017287.2 Cucumis melo HOM05D001061 ORTHO05D006881 7.9e-96 355.5 325 57.8
Dinv36905 Davidia involucrata HOM05D001061 ORTHO05D006881 7.9e-96 355.5 342 56.4
ClCG06G015030 Citrullus lanatus HOM05D001061 ORTHO05D006881 1.0e-95 355.1 342 56.1
Sabra12G0043000 Salix brachista HOM05D001061 ORTHO05D006881 1.4e-95 354.8 333 57.1
Gohir.D09G046800 Gossypium hirsutum HOM05D001061 ORTHO05D006881 1.8e-95 354.4 335 55.8
Gorai.006G063300 Gossypium raimondii HOM05D001061 ORTHO05D006881 1.8e-95 354.4 335 55.8
CiPaw.15G126900 Carya illinoinensis HOM05D001061 ORTHO05D006881 2.3e-95 354.0 342 55.8
Cpa.g.c35114 Carica papaya HOM05D001061 ORTHO05D006881 3.0e-95 353.6 335 55.8
Migut.I00396 Erythranthe guttata HOM05D001061 ORTHO05D006881 3.9e-95 353.2 342 55.6
CAN.G587.78 Capsicum annuum HOM05D001061 ORTHO05D006881 6.7e-95 352.4 337 56.1
PGSC0003DMG400004071 Solanum tuberosum HOM05D001061 ORTHO05D006881 6.7e-95 352.4 337 55.8
Rhsim08G0137000 Rhododendron simsii HOM05D001061 ORTHO05D006881 8.8e-95 352.1 337 56.7
DCAR_023182 Daucus carota HOM05D001061 ORTHO05D006881 2.0e-94 350.9 349 54.2
MSTRG.11316 Avicennia marina HOM05D001061 ORTHO05D006881 2.5e-94 350.5 332 55.4
Sed0003655 Sechium edule HOM05D001061 ORTHO05D006881 2.5e-94 350.5 335 56.1
vmacro17676 Vaccinium macrocarpon HOM05D001061 ORTHO05D006881 3.3e-94 350.1 336 55.4
AUR62032190 Chenopodium quinoa HOM05D001061 ORTHO05D006881 9.7e-94 348.6 335 54.6
Peaxi162Scf00013g00939 Petunia axillaris HOM05D001061 ORTHO05D006881 1.7e-93 347.8 332 56.0
EL10Ac5g11250 Beta vulgaris HOM05D001061 ORTHO05D006881 2.8e-93 347.1 328 54.6
SGA_v2.0_scaffold19G08803 Striga asiatica HOM05D001061 ORTHO05D006881 3.7e-93 346.7 334 54.5
Nitab4.5_0001432g0030 Nicotiana tabacum HOM05D001061 ORTHO05D006881 6.3e-93 345.9 314 58.0
VMungo1215G1249 Vigna mungo HOM05D001061 ORTHO05D006881 6.3e-93 345.9 342 55.3
CDE10G0399 Ceratophyllum demersum HOM05D001061 ORTHO05D006881 8.2e-93 345.5 328 54.9
Lsat_1_v5_gn_5_25080 Lactuca sativa HOM05D001061 ORTHO05D006881 1.8e-92 344.4 403 49.6
AUR62036955 Chenopodium quinoa HOM05D001061 ORTHO05D006881 2.4e-92 344.0 335 54.3
ECA246G2868 Erigeron canadensis HOM05D001061 ORTHO05D006881 5.3e-92 342.8 355 51.8
AL3G31850 Arabidopsis lyrata HOM05D001061 ORTHO05D006881 1.5e-91 341.3 335 52.8
AT3G18524 Arabidopsis thaliana HOM05D001061 ORTHO05D006881 1.5e-91 341.3 335 52.5
HanXRQChr05g0153891 Helianthus annuus HOM05D001061 ORTHO05D006881 2.0e-91 340.9 326 55.5
CARHR093910 Cardamine hirsuta HOM05D001061 ORTHO05D006881 7.7e-91 339.0 335 52.2
BcaB04g18987 Brassica carinata HOM05D001061 ORTHO05D006881 5.0e-90 336.3 335 52.5
Sp3g16620 Schrenkiella parvula HOM05D001061 ORTHO05D006881 1.4e-89 334.7 335 51.6
BcaC01g03695 Brassica carinata HOM05D001061 ORTHO05D006881 3.2e-89 333.6 335 51.3
C03p49490 Brassica napus HOM05D001061 ORTHO05D006881 3.2e-89 333.6 335 51.3
BolC3t17247H Brassica oleracea HOM05D001061 ORTHO05D006881 3.2e-89 333.6 335 51.3
Thhalv10020006m.g Eutrema salsugineum HOM05D001061 ORTHO05D006881 3.2e-89 333.6 335 51.9
Aa31LG8G5400 Aethionema arabicum HOM05D001061 ORTHO05D006881 4.2e-89 333.2 335 51.0
A03p40700 Brassica napus HOM05D001061 ORTHO05D006881 5.5e-89 332.8 337 51.0
BraA03t13227Z Brassica rapa HOM05D001061 ORTHO05D006881 7.2e-89 332.4 337 51.0
Carub.0003s1832 Capsella rubella HOM05D001061 ORTHO05D006881 9.4e-89 332.0 335 51.3
SHI18889 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-88 329.3 328 53.4
unitig_61.g26195 Utricularia gibba HOM05D001061 ORTHO05D006881 3.1e-84 317.0 342 49.4
Pp3c22_850 Physcomitrium patens HOM05D001061 ORTHO05D006881 4.1e-84 316.6 338 47.9
AUR62043676 Chenopodium quinoa HOM05D001061 ORTHO05D006881 5.5e-81 306.2 346 49.1
AagrBONN_evm.TU.Sc2ySwM_344.1255 Anthoceros agrestis HOM05D001061 ORTHO05D006881 3.6e-80 303.5 328 48.2
Mapoly0120s0004 Marchantia polymorpha HOM05D001061 ORTHO05D006881 6.7e-79 299.3 369 45.5
Psat4g083360 Pisum sativum HOM05D001061 ORTHO05D006881 1.1e-78 298.5 292 55.8
FAN04G0918 Fragaria x ananassa HOM05D001061 ORTHO05D006881 3.3e-78 297.0 272 57.4
SMO347G0538 Selaginella moellendorffii HOM05D001061 ORTHO05D006881 1.2e-75 288.5 333 45.0
Sc10g0009570 Simmondsia chinensis HOM05D001061 ORTHO05D006881 7.7e-75 285.8 285 52.3
Atru.chr9.754 Acer truncatum HOM05D001061 ORTHO05D006881 1.4e-68 265.0 251 56.6
Dinv38588 Davidia involucrata HOM05D001061 ORTHO05D006881 1.9e-65 254.6 272 52.2
Psat4g043480 Pisum sativum HOM05D001061 ORTHO05D006881 7.5e-62 242.7 308 46.8
Nitab4.5_0008699g0020 Nicotiana tabacum HOM05D001061 ORTHO05D006881 6.3e-53 213.0 204 55.4
CBR_g24047 Chara braunii HOM05D001061 ORTHO05D006881 1.2e-51 208.8 309 38.2
SMO347G0174 Selaginella moellendorffii HOM05D001061 ORTHO05D006881 4.7e-40 170.2 206 43.2
PRCOL_00002085 Prasinoderma coloniale HOM05D001061 ORTHO05D006881 1.1e-39 169.1 321 31.8
MCO01G314 Micromonas commoda HOM05D001061 ORTHO05D006881 8.6e-34 149.4 359 28.4
HPP92_018511 Vanilla planifolia HOM05D001061 ORTHO05D006881 7.3e-33 146.4 99 69.7
Cre01.g003463 Chlamydomonas reinhardtii HOM05D001061 ORTHO05D006881 1.2e-30 139.0 353 30.6
Peaxi162Scf00081g02220 Petunia axillaris HOM05D001061 ORTHO05D006881 3.9e-18 97.4 139 44.6
CAN.G9541.1 Capsicum annuum HOM05D001061 ORTHO05D006881 5.6e-17 93.6 58 74.1
Ah.11g047120 Amaranthus hybridus HOM05D001061 ORTHO05D006881 9.6e-09 66.2 177 30.5
DCAR_010445 Daucus carota HOM05D001061 ORTHO05D007103 1.8e-07 62.0 215 24.7
Hund09195 Selenicereus undatus HOM05D001061 ORTHO05D007103 5.3e-07 60.5 130 30.8
EL10Ac8g18512 Beta vulgaris HOM05D001061 ORTHO05D007103 1.2e-06 59.3 135 31.1
Oeu055866.1 Olea europaea HOM05D001061 ORTHO05D007103 1.2e-06 59.3 286 25.9
SGA_v2.0_scaffold109G31024 Striga asiatica HOM05D001061 ORTHO05D007103 2.6e-06 58.2 164 25.6
Dinv41590 Davidia involucrata HOM05D001061 ORTHO05D007103 5.8e-06 57.0 181 29.3


User provided reference genes

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