Gene: Duzib205G1584

General Information

Structural Information

  • Species Durio zibethinus
  • Gene Identifier Duzib205G1584
  • Transcript Identifier Duzib205G1584.01
  • Gene Type Coding gene
  • Location NW_019168381.1 : 15141889-15149701 : negative

Gene Family Information

  • ID HOM05D001061
  • #Genes/#Species 575/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name LOC111291050
  • name XM_022882596.1
  • pid XP_022738331.1
  • id gene-LOC111291050
  • uniprot A0A6P5YE72

Descriptions

  • product DNA mismatch repair protein MSH2-like
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045128
ISO
PLAZA Integrative Orthologynegative regulation of reciprocal meiotic recombination AT3G18524
GO:0006290
ISO
PLAZA Integrative Orthologypyrimidine dimer repair AT3G18524
GO:0006298
IEA
GOA Databasemismatch repair
GO:0006298
IEA
InterPromismatch repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006281
IEA
GOA DatabaseDNA repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003684
ISO
PLAZA Integrative Orthologydamaged DNA binding AT3G18524
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G18524
GO:0030983
IEA
GOA Databasemismatched DNA binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G18524
GO:0032300
IEA
GOA Databasemismatch repair complex
GO:0032300
IEA
InterPromismatch repair complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032642 DNA mismatch repair protein Msh2
IPR007861 DNA mismatch repair protein MutS, clamp
IPR007696 DNA mismatch repair protein MutS, core
IPR045076 DNA mismatch repair MutS family
IPR011184 DNA mismatch repair Msh2-type
IPR036678 MutS, connector domain superfamily
IPR016151 DNA mismatch repair protein MutS, N-terminal
IPR007860 DNA mismatch repair protein MutS, connector domain
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR036187 DNA mismatch repair protein MutS, core domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR007695 DNA mismatch repair protein MutS-like, N-terminal
Mapman id Description
14.7.1.1 DNA damage response.mismatch repair (MMR).MSH2-x mismatch repair heterodimer components.component MSH2