Gene: SHI18889
General Information
Structural Information
- Species Sapria himalayana
- Gene Identifier SHI18889
- Transcript Identifier SHI18889-RA
- Gene Type Coding gene
- Location scaffold32_6892495 : 311112-358616 : positive
Gene Family Information
- ID HOM05D000002
- #Genes/#Species 26594/98
- Phylogenetic origin
- ID ORTHO05D000001
- #Genes/#Species 28434/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid SHI18889-RA
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006298 | IEA | InterPro | mismatch repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0030983 | IEA | InterPro | mismatched DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032300 | IEA | InterPro | mismatch repair complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR045076 | DNA mismatch repair MutS family |
| IPR032642 | DNA mismatch repair protein Msh2 |
| IPR013103 | Reverse transcriptase, RNA-dependent DNA polymerase |
| IPR007861 | DNA mismatch repair protein MutS, clamp |
| IPR007860 | DNA mismatch repair protein MutS, connector domain |
| IPR007696 | DNA mismatch repair protein MutS, core |
| IPR007695 | DNA mismatch repair protein MutS-like, N-terminal |
| IPR036678 | MutS, connector domain superfamily |
| IPR036187 | DNA mismatch repair protein MutS, core domain superfamily |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR016151 | DNA mismatch repair protein MutS, N-terminal |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |