Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.5e-120 436.4 255 100.0
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 4.5e-101 371.7 255 87.1
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 1.2e-80 303.9 255 76.5
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 1.8e-78 296.6 255 70.6
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 3.1e-78 295.8 255 70.2
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 3.5e-77 292.4 255 72.2
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 2.9e-76 289.3 255 71.0
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 9.5e-75 284.3 255 71.4
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 8.9e-73 277.7 255 65.9
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.0e-72 276.6 255 66.3
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.6e-72 276.2 255 66.7
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 4.4e-72 275.4 255 66.7
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 4.4e-72 275.4 255 65.9
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 1.3e-71 273.9 265 64.9
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 3.7e-71 272.3 254 72.4
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 3.7e-71 272.3 256 69.5
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 3.2e-70 269.2 255 69.4
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 3.5e-69 265.8 253 68.8
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 7.8e-69 264.6 257 70.4
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 1.7e-68 263.5 256 68.4
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 2.9e-68 262.7 255 67.8
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 3.9e-68 262.3 254 66.1
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.1e-67 260.8 255 69.8
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 1.5e-67 260.4 261 59.8
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 2.5e-67 259.6 256 64.8
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 2.5e-67 259.6 255 69.8
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 2.5e-67 259.6 255 65.1
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 4.3e-67 258.8 255 69.8
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 1.2e-66 257.3 257 67.7
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 2.8e-66 256.1 258 62.4
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 3.6e-66 255.8 264 64.0
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 6.1e-66 255.0 252 63.9
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 1.4e-65 253.8 252 64.7
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 1.4e-65 253.8 252 64.7
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 2.3e-65 253.1 260 58.5
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 2.3e-65 253.1 268 60.8
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 5.2e-65 251.9 252 60.3
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 8.9e-65 251.1 268 58.6
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 1.5e-64 250.4 297 53.2
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 2.0e-64 250.0 252 64.7
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 3.4e-64 249.2 252 61.9
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 9.8e-64 247.7 263 65.8
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 2.2e-63 246.5 293 52.9
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 6.4e-63 245.0 259 66.8
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 1.1e-62 244.2 268 60.4
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 2.4e-62 243.0 252 65.5
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 5.4e-62 241.9 265 60.4
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 5.4e-62 241.9 265 60.4
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 7.0e-62 241.5 265 60.4
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 9.2e-62 241.1 256 64.8
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 9.2e-62 241.1 265 60.0
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 1.2e-61 240.7 279 60.9
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 2.7e-61 239.6 254 66.9
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 3.5e-61 239.2 252 62.7
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 4.6e-61 238.8 262 60.3
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 1.0e-60 237.7 257 61.5
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 1.3e-60 237.3 262 61.5
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 5.0e-60 235.3 265 60.0
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 1.1e-59 234.2 265 61.1
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 9.5e-59 231.1 255 62.7
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 1.6e-58 230.3 265 61.1
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 1.6e-58 230.3 256 60.9
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 1.8e-57 226.9 254 60.2
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 2.3e-57 226.5 253 60.5
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 6.8e-57 224.9 298 54.4
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 5.8e-56 221.9 252 57.5
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 1.3e-55 220.7 250 60.8
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 1.3e-55 220.7 268 53.0
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 1.7e-55 220.3 253 62.8
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 1.7e-55 220.3 258 60.1
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 4.9e-55 218.8 252 62.3
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 1.1e-54 217.6 255 54.9
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 1.1e-54 217.6 268 52.6
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.4e-54 217.2 295 56.3
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.4e-54 217.2 263 60.1
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 2.7e-53 213.0 254 61.0
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 3.5e-53 212.6 264 58.7
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 2.3e-52 209.9 254 56.3
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 5.1e-52 208.8 254 59.4
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 5.1e-52 208.8 256 58.2
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 6.6e-52 208.4 254 56.7
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 6.6e-52 208.4 251 56.6
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 9.5e-51 204.5 252 56.3
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 2.1e-50 203.4 252 54.8
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 4.7e-50 202.2 256 60.5
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 6.2e-50 201.8 264 57.2
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 9.9e-48 194.5 254 57.9
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 2.2e-47 193.4 264 55.7
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 2.2e-47 193.4 258 47.7
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 6.4e-47 191.8 254 52.4
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 7.3e-43 178.3 253 49.4
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 2.8e-42 176.4 208 62.0
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 4.9e-39 165.6 255 52.2
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 1.5e-35 154.1 245 43.3
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 3.3e-35 152.9 301 44.2
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 3.1e-33 146.4 111 69.4
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.0e-32 143.7 152 64.5
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 3.8e-31 139.4 208 53.8
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 1.1e-30 137.9 295 42.7
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 4.2e-30 136.0 294 43.2
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.0e-28 131.3 218 55.0
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 3.0e-28 129.8 89 75.3
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 1.1e-25 121.3 281 39.1
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.8e-23 112.8 193 45.1
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 3.8e-23 112.8 70 80.0
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.2e-21 107.8 193 44.6
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 4.6e-21 105.9 152 59.2
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 4.6e-21 105.9 338 35.5
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 1.3e-20 104.4 70 70.0
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 2.3e-20 103.6 150 56.0
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.1e-19 101.3 207 50.2
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 2.6e-16 90.1 253 37.2
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 4.6e-13 79.3 121 48.8
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 8.7e-12 75.1 90 57.8
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 8.7e-12 75.1 90 57.8
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.5e-11 74.3 186 38.2
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 9.0e-09 65.1 78 56.4
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.0e-08 63.9 193 35.8


User provided reference genes

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