Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI74G1605 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 9.4e-248 859.8 441 100.0
TWI74G0321 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 9.9e-197 690.3 370 94.9
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 3.8e-172 608.6 366 87.2
QL07p025530 Quercus lobata HOM05D003161 ORTHO05D005173 5.2e-145 518.5 362 74.6
Cpa.g.sc85.20 Carica papaya HOM05D003161 ORTHO05D005173 7.4e-144 514.6 349 76.8
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 2.6e-141 506.1 412 65.3
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 3.5e-141 505.8 343 77.3
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 7.7e-141 504.6 375 71.2
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 1.0e-140 504.2 439 63.3
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 1.0e-140 504.2 343 76.1
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 1.3e-140 503.8 444 62.6
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 1.3e-140 503.8 343 76.7
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 5.0e-140 501.9 343 75.8
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 4.2e-139 498.8 358 72.9
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 2.1e-138 496.5 342 73.1
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 3.0e-137 492.7 349 71.3
vmacro09128 Vaccinium macrocarpon HOM05D003161 ORTHO05D005173 5.7e-136 488.4 344 72.1
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 1.3e-135 487.3 348 71.8
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 1.7e-135 486.9 346 71.7
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 2.8e-135 486.1 346 72.5
PGSC0003DMG400008644 Solanum tuberosum HOM05D003161 ORTHO05D005173 6.3e-135 485.0 342 74.0
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 8.3e-135 484.6 343 74.3
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 1.8e-134 483.4 337 73.6
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 4.1e-134 482.3 343 73.8
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 1.6e-133 480.3 349 72.2
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 4.5e-133 478.8 347 70.9
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 1.0e-132 477.6 347 70.9
ClCG04G001230 Citrullus lanatus HOM05D003161 ORTHO05D005173 1.7e-132 476.9 341 70.7
CSS0042321 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 1.5e-131 473.8 348 70.4
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 3.2e-131 472.6 342 72.2
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 4.2e-131 472.2 349 69.1
Sabra16G0064600 Salix brachista HOM05D003161 ORTHO05D005173 5.5e-131 471.9 347 69.7
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 2.1e-130 469.9 343 72.3
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 6.1e-130 468.4 289 79.9
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 6.1e-130 468.4 345 71.9
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 1.5e-128 463.8 343 70.8
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 9.8e-128 461.1 343 70.6
Nitab4.5_0001364g0070 Nicotiana tabacum HOM05D003161 ORTHO05D005173 2.2e-127 459.9 342 71.9
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 3.7e-127 459.1 341 68.9
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 4.8e-127 458.8 345 67.2
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 1.4e-126 457.2 350 66.6
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 3.1e-126 456.1 343 69.4
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 4.1e-126 455.7 337 68.8
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 5.4e-126 455.3 350 67.4
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 7.0e-126 454.9 331 69.8
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 9.1e-126 454.5 342 69.9
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 2.0e-125 453.4 337 68.5
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 2.7e-125 453.0 339 69.6
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 5.9e-125 451.8 343 68.8
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 7.7e-125 451.4 376 62.2
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 1.0e-124 451.1 338 67.2
BcaC05g29306 Brassica carinata HOM05D003161 ORTHO05D005173 1.0e-124 451.1 343 68.5
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 2.3e-124 449.9 342 68.4
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 2.9e-124 449.5 338 68.0
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 2.9e-124 449.5 436 57.1
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 3.8e-124 449.1 349 66.5
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 8.6e-124 448.0 340 67.9
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 8.6e-124 448.0 429 58.0
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 1.1e-123 447.6 343 67.9
A05p37390 Brassica napus HOM05D003161 ORTHO05D005173 1.5e-123 447.2 339 68.1
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 1.9e-123 446.8 351 66.1
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.9e-123 446.8 350 66.9
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 1.9e-123 446.8 340 66.8
CiPaw.08G134600 Carya illinoinensis HOM05D003161 ORTHO05D005173 3.3e-123 446.0 346 66.2
Nitab4.5_0000571g0110 Nicotiana tabacum HOM05D003161 ORTHO05D005173 4.2e-123 445.7 342 70.8
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 5.5e-123 445.3 348 67.0
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 9.5e-123 444.5 347 66.0
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 1.6e-122 443.7 350 64.6
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 2.1e-122 443.4 351 65.5
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 2.1e-122 443.4 340 67.1
BcaC09g48184 Brassica carinata HOM05D003161 ORTHO05D005173 2.8e-122 443.0 427 57.4
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 2.8e-122 443.0 427 57.4
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 2.8e-122 443.0 350 66.6
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 4.7e-122 442.2 339 67.8
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 4.7e-122 442.2 339 67.8
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.7e-122 442.2 348 66.4
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 6.1e-122 441.8 345 65.2
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 8.0e-122 441.4 347 66.9
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 1.0e-121 441.0 346 64.7
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.8e-121 440.3 347 66.6
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 2.3e-121 439.9 346 67.3
CARHR086520 Cardamine hirsuta HOM05D003161 ORTHO05D005173 6.8e-121 438.3 343 67.1
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 3.7e-119 432.6 344 64.5
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 9.2e-118 427.9 340 65.6
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 7.8e-117 424.9 368 59.0
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 1.3e-116 424.1 346 62.4
Os07g0203300 Oryza sativa ssp. japonica HOM05D003161 ORTHO05D005173 2.3e-116 423.3 351 62.1
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 6.6e-116 421.8 352 63.9
PSO210G4351 Papaver somniferum HOM05D003161 ORTHO05D005173 8.6e-116 421.4 347 62.2
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 4.3e-115 419.1 396 59.1
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 5.6e-115 418.7 354 63.3
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 6.8e-113 411.8 356 60.7
Hund19218 Selenicereus undatus HOM05D003161 ORTHO05D005173 7.5e-112 408.3 349 60.7
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 9.8e-112 407.9 357 59.7
HPP92_027318 Vanilla planifolia HOM05D003161 ORTHO05D005173 1.7e-111 407.1 408 56.1
CDE02G2929 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 2.2e-111 406.8 346 61.8
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 1.1e-110 404.4 345 60.0
Zm00001eb302830 Zea mays HOM05D003161 ORTHO05D005173 3.5e-109 399.4 342 61.7
SEGI_01045 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 5.0e-108 395.6 346 61.6
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 1.9e-107 393.7 287 69.0
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 4.3e-107 392.5 342 62.3
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 1.2e-104 384.4 334 59.0
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 4.9e-103 379.0 348 61.2
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 3.0e-100 369.8 362 55.2
AUR62041563 Chenopodium quinoa HOM05D003161 ORTHO05D005173 9.5e-99 364.8 368 53.5
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 1.4e-97 360.9 356 52.8
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 8.9e-97 358.2 347 58.8
MD14G1049800 Malus domestica HOM05D003161 ORTHO05D005173 9.9e-96 354.8 286 64.3
Pp3c4_30330 Physcomitrium patens HOM05D003161 ORTHO05D005173 1.0e-92 344.7 332 54.8
Zm00001eb302870 Zea mays HOM05D003161 ORTHO05D005173 1.3e-87 327.8 277 61.4
CBR_g22381 Chara braunii HOM05D003161 ORTHO05D005173 1.4e-86 324.3 294 54.8
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 4.2e-86 322.8 347 54.2
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 1.1e-83 314.7 310 55.8
SMO137G0021 Selaginella moellendorffii HOM05D003161 ORTHO05D005173 1.1e-83 314.7 370 47.3
SHI30029 Sapria himalayana HOM05D003161 ORTHO05D005173 2.1e-77 293.9 313 52.4
BcaB06g25562 Brassica carinata HOM05D003161 ORTHO05D005173 4.6e-77 292.7 194 74.2
CAN.G317.8 Capsicum annuum HOM05D003161 ORTHO05D005173 2.5e-75 287.0 195 74.4
Cre10.g428750 Chlamydomonas reinhardtii HOM05D003161 ORTHO05D005173 6.2e-74 282.3 294 48.3
CSS0008153 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 1.8e-73 280.8 284 56.0
CAN.G1433.27 Capsicum annuum HOM05D003161 ORTHO05D005173 1.1e-70 271.6 338 49.1
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 5.1e-68 262.7 284 52.8
Aqoxy4G00694 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 1.1e-67 261.5 347 46.1
Hund18983 Selenicereus undatus HOM05D003161 ORTHO05D005173 4.6e-61 239.6 337 43.3
unitig_744.g24086 Utricularia gibba HOM05D003161 ORTHO05D005173 1.1e-59 235.0 313 44.1
Actinidia38605 Actinidia chinensis HOM05D003161 ORTHO05D005173 3.8e-47 193.4 184 60.3
PRCOL_00005658 Prasinoderma coloniale HOM05D003161 ORTHO05D005173 8.5e-47 192.2 287 39.7
Hund18979 Selenicereus undatus HOM05D003161 ORTHO05D005173 1.7e-42 177.9 296 41.2
Cfa023914 Carpinus fangiana HOM05D003161 ORTHO05D005173 3.1e-41 173.7 311 35.0
Actinidia38606 Actinidia chinensis HOM05D003161 ORTHO05D005173 7.2e-38 162.5 151 59.6
Lsat_1_v5_gn_5_134001 Lactuca sativa HOM05D003161 ORTHO05D005173 2.7e-29 134.0 131 57.3
Sabra16G0064500 Salix brachista HOM05D003161 ORTHO05D005173 1.4e-28 131.7 106 67.9
Actinidia30948 Actinidia chinensis HOM05D003161 ORTHO05D005173 6.7e-28 129.4 110 60.0
vmacro22129 Vaccinium macrocarpon HOM05D003161 ORTHO05D015567 2.0e-24 117.9 106 58.5
Lsat_1_v5_gn_9_24981 Lactuca sativa HOM05D009325 ORTHO05D005173 1.3e-23 115.2 78 66.7
CDE02G0114 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 2.9e-23 114.0 99 56.6
HPP92_015876 Vanilla planifolia HOM05D003161 ORTHO05D005173 1.5e-22 111.7 102 61.8
Nitab4.5_0001364g0080 Nicotiana tabacum HOM05D003161 ORTHO05D015567 7.2e-22 109.4 105 55.2
Nitab4.5_0000571g0080 Nicotiana tabacum HOM05D003161 ORTHO05D015567 1.2e-21 108.6 105 54.3
Lsat_1_v5_gn_8_97781 Lactuca sativa HOM05D003161 ORTHO05D005173 2.1e-21 107.8 96 58.3
QL07p025506 Quercus lobata HOM05D003161 ORTHO05D005173 2.3e-20 104.4 130 50.8
CAN.G1433.26 Capsicum annuum HOM05D003161 ORTHO05D015567 1.7e-18 98.2 99 52.5
Cpa.g.sc85.25 Carica papaya HOM05D003161 ORTHO05D119738 1.9e-14 84.7 96 54.2
AagrBONN_evm.TU.Sc2ySwM_340.243 Anthoceros agrestis HOM05D003161 ORTHO05D005173 1.2e-11 75.5 105 41.9
SEGI_29966 Sequoiadendron giganteum HOM05D003161 ORTHO05D015567 1.1e-09 68.9 106 39.6
Lsat_1_v5_gn_7_25100 Lactuca sativa HOM05D003161 ORTHO05D005173 1.6e-08 65.1 47 57.4
unitig_744.g24087 Utricularia gibba HOM05D003161 ORTHO05D005173 3.8e-07 60.5 41 73.2
MCO05G210 Micromonas commoda HOM05D001971 ORTHO05D003057 1.1e-06 58.9 257 24.5
AUR62041562 Chenopodium quinoa HOM05D003161 ORTHO05D005173 1.9e-06 58.2 59 52.5


User provided reference genes

Program Settings