Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI73G0023 Tripterygium wilfordii HOM05D005639 ORTHO05D007234 4.8e-275 950.7 518 100.0
TWI09G1293 Tripterygium wilfordii HOM05D005639 ORTHO05D007234 5.9e-241 837.4 518 87.6
Ciclev10014949m.g Citrus clementina HOM05D005639 ORTHO05D007234 8.6e-184 647.5 519 71.7
Atru.chr10.888 Acer truncatum HOM05D005639 ORTHO05D007234 7.3e-183 644.4 520 71.0
Prupe.4G089600 Prunus persica HOM05D005639 ORTHO05D007234 2.4e-178 629.4 521 68.9
Cpa.g.sc19.212 Carica papaya HOM05D005639 ORTHO05D007234 3.2e-178 629.0 526 69.4
CsaV3_5G039540 Cucumis sativus L. HOM05D005639 ORTHO05D007234 6.2e-174 614.8 511 68.5
MD10G1254000 Malus domestica HOM05D005639 ORTHO05D007234 5.3e-173 611.7 519 67.6
Sed0017304 Sechium edule HOM05D005639 ORTHO05D007234 5.3e-173 611.7 516 68.2
GSVIVG01021618001 Vitis vinifera HOM05D005639 ORTHO05D007234 1.2e-172 610.5 526 68.4
Rhsim13G0120200 Rhododendron simsii HOM05D005639 ORTHO05D007234 1.3e-171 607.1 519 68.4
ClCG08G001610 Citrullus lanatus HOM05D005639 ORTHO05D007234 2.9e-171 605.9 512 69.3
Cfa016817 Carpinus fangiana HOM05D005639 ORTHO05D007234 7.9e-169 597.8 510 66.7
Dinv03058 Davidia involucrata HOM05D005639 ORTHO05D007234 1.0e-168 597.4 519 67.8
CSS0044875 Camellia sinensis var. sinensis HOM05D005639 ORTHO05D007234 1.8e-168 596.7 522 67.8
CiPaw.04G138400 Carya illinoinensis HOM05D005639 ORTHO05D007234 5.1e-168 595.1 518 67.2
vmacro03396 Vaccinium macrocarpon HOM05D005639 ORTHO05D007234 3.3e-167 592.4 519 68.2
DCAR_003859 Daucus carota HOM05D005639 ORTHO05D007234 3.6e-166 589.0 513 66.3
Nn5g27628 Nelumbo nucifera HOM05D005639 ORTHO05D007234 4.8e-166 588.6 519 65.9
Haze_19855 Corylus avellana HOM05D005639 ORTHO05D007234 1.1e-165 587.4 534 64.6
MSTRG.13266 Avicennia marina HOM05D005639 ORTHO05D007234 1.4e-165 587.0 527 68.1
QL03p009300 Quercus lobata HOM05D005639 ORTHO05D007234 2.4e-165 586.3 588 57.5
Sed0027243 Sechium edule HOM05D005639 ORTHO05D007234 1.2e-164 583.9 517 66.5
MD05G1274300 Malus domestica HOM05D005639 ORTHO05D007234 3.4e-164 582.4 518 66.2
MELO3C022131.2 Cucumis melo HOM05D005639 ORTHO05D007234 3.8e-163 578.9 484 69.0
COL.COLO4_26825 Corchorus olitorius HOM05D005639 ORTHO05D007234 4.9e-163 578.6 516 65.1
Thecc.06G000900 Theobroma cacao HOM05D005639 ORTHO05D007234 4.9e-163 578.6 518 64.7
Dinv01990 Davidia involucrata HOM05D005639 ORTHO05D007234 6.4e-163 578.2 508 67.7
Eucgr.D00190 Eucalyptus grandis HOM05D005639 ORTHO05D007234 1.9e-162 576.6 535 65.0
THA.LOC104812393 Tarenaya hassleriana HOM05D005639 ORTHO05D007234 1.8e-160 570.1 525 63.4
Hma1.2p1_0333F.1_g128320 Hydrangea macrophylla HOM05D005639 ORTHO05D007234 3.9e-160 568.9 519 65.1
VMungo0540G0794 Vigna mungo HOM05D005639 ORTHO05D007234 1.9e-159 566.6 500 65.2
Lsat_1_v5_gn_4_3900 Lactuca sativa HOM05D005639 ORTHO05D007234 2.5e-159 566.2 523 64.1
THA.LOC104806253 Tarenaya hassleriana HOM05D005639 ORTHO05D007234 2.5e-159 566.2 444 70.3
FvH4_3g09990 Fragaria vesca HOM05D005639 ORTHO05D007234 4.3e-159 565.5 508 64.6
Hund22392 Selenicereus undatus HOM05D005639 ORTHO05D007234 1.3e-158 563.9 530 63.2
Actinidia36001 Actinidia chinensis HOM05D005639 ORTHO05D007234 2.1e-158 563.1 520 64.0
Gorai.005G118400 Gossypium raimondii HOM05D005639 ORTHO05D007234 6.2e-158 561.6 522 62.8
Gohir.D02G104300 Gossypium hirsutum HOM05D005639 ORTHO05D007234 2.4e-157 559.7 522 62.6
Gohir.A02G094000 Gossypium hirsutum HOM05D005639 ORTHO05D007234 5.3e-157 558.5 517 62.9
Lalb_Chr18g0057911 Lupinus albus HOM05D005639 ORTHO05D007234 5.3e-157 558.5 516 64.7
Lj6g0009484 Lotus japonicus HOM05D005639 ORTHO05D007234 1.2e-156 557.4 503 65.6
FAN25G3670 Fragaria x ananassa HOM05D005639 ORTHO05D007234 2.6e-156 556.2 510 64.3
Phvul.006G129100 Phaseolus vulgaris HOM05D005639 ORTHO05D007234 5.8e-156 555.1 501 64.3
Manes.13G081200 Manihot esculenta HOM05D005639 ORTHO05D007234 1.3e-155 553.9 522 64.8
SGA_v2.0_scaffold106G30666 Striga asiatica HOM05D005639 ORTHO05D007234 1.4e-154 550.4 436 72.9
Migut.H01334 Erythranthe guttata HOM05D005639 ORTHO05D007234 1.9e-154 550.1 405 74.6
Psat1g168120 Pisum sativum HOM05D005639 ORTHO05D007234 1.9e-154 550.1 495 64.2
FAN21G2832 Fragaria x ananassa HOM05D005639 ORTHO05D007234 9.3e-154 547.7 519 62.8
Potri.007G107900 Populus trichocarpa HOM05D005639 ORTHO05D007234 9.3e-154 547.7 519 63.6
HanXRQChr17g0569471 Helianthus annuus HOM05D005639 ORTHO05D007234 2.7e-153 546.2 516 61.6
PGR083G2688 Punica granatum HOM05D005639 ORTHO05D007234 2.7e-153 546.2 474 66.5
Sabra05G0051400 Salix brachista HOM05D005639 ORTHO05D007234 2.7e-153 546.2 517 61.3
arahy.Tifrunner.gnm1.ann1.JS3IU7 Arachis hypogaea HOM05D005639 ORTHO05D007234 1.8e-152 543.5 521 62.0
Cc09_g08220 Coffea canephora HOM05D005639 ORTHO05D007234 1.8e-152 543.5 537 62.2
SalBow7G3138 Salvia bowleyana HOM05D005639 ORTHO05D007234 3.0e-152 542.7 558 60.9
Glyma.09G023100 Glycine max HOM05D005639 ORTHO05D007234 6.7e-152 541.6 437 69.6
Potri.005G061000 Populus trichocarpa HOM05D005639 ORTHO05D007234 6.7e-152 541.6 516 62.6
Peaxi162Scf00670g00332 Petunia axillaris HOM05D005639 ORTHO05D007234 1.1e-151 540.8 406 72.7
FAN16G1271 Fragaria x ananassa HOM05D005639 ORTHO05D007234 1.9e-151 540.0 524 57.6
RcHm_v2.0_Chr5g0015871 Rosa chinensis HOM05D005639 ORTHO05D007234 1.9e-151 540.0 443 68.8
Ca_00807_v3 Cicer arietinum L. HOM05D005639 ORTHO05D007234 3.3e-151 539.3 398 73.1
PGSC0003DMG402021193 Solanum tuberosum HOM05D005639 ORTHO05D007234 3.3e-151 539.3 521 62.4
ECA234G3170 Erigeron canadensis HOM05D005639 ORTHO05D007234 3.7e-150 535.8 447 67.8
Sc24g0001380 Simmondsia chinensis HOM05D005639 ORTHO05D007234 6.3e-150 535.0 529 61.4
Medtr2g029940 Medicago truncatula HOM05D005639 ORTHO05D007234 1.5e-148 530.4 443 68.2
Nitab4.5_0004077g0020 Nicotiana tabacum HOM05D005639 ORTHO05D007234 1.5e-148 530.4 523 61.6
Aqoxy1G01607 Aquilegia oxysepala HOM05D005639 ORTHO05D007234 5.9e-148 528.5 437 67.7
Nitab4.5_0002719g0080 Nicotiana tabacum HOM05D005639 ORTHO05D007234 2.2e-147 526.6 523 61.6
Solyc02g069770.3 Solanum lycopersicum HOM05D005639 ORTHO05D007234 5.0e-147 525.4 521 61.8
Sopen02g018930 Solanum pennellii HOM05D005639 ORTHO05D007234 6.5e-147 525.0 521 61.6
arahy.Tifrunner.gnm1.ann1.MSHM5J Arachis hypogaea HOM05D005639 ORTHO05D007234 2.5e-146 523.1 560 57.9
PSO675G8746 Papaver somniferum HOM05D005639 ORTHO05D007234 3.2e-146 522.7 524 59.9
Sabra07G0088400 Salix brachista HOM05D005639 ORTHO05D007234 3.2e-146 522.7 522 61.1
Ah.14g085710 Amaranthus hybridus HOM05D005639 ORTHO05D007234 1.6e-145 520.4 523 60.0
HPP92_013994 Vanilla planifolia HOM05D005639 ORTHO05D007234 1.8e-144 516.9 497 62.0
FAN11G3706 Fragaria x ananassa HOM05D005639 ORTHO05D007234 2.3e-144 516.5 516 57.8
TAR626G0701 Trochodendron aralioides HOM05D005639 ORTHO05D007234 3.9e-144 515.8 380 74.2
PSO541G1457 Papaver somniferum HOM05D005639 ORTHO05D007234 5.1e-144 515.4 525 60.0
ATR0165G031 Amborella trichopoda HOM05D005639 ORTHO05D007234 1.3e-142 510.8 519 58.2
AT4G21130 Arabidopsis thaliana HOM05D005639 ORTHO05D007234 2.4e-141 506.5 517 54.4
CARHR252170 Cardamine hirsuta HOM05D005639 ORTHO05D007234 1.1e-138 497.7 524 59.0
Aa31LG9G9170 Aethionema arabicum HOM05D005639 ORTHO05D007234 7.2e-138 495.0 458 65.1
unitig_8.g4887 Utricularia gibba HOM05D005639 ORTHO05D007234 2.7e-137 493.0 507 61.1
CiPaw.02G032400 Carya illinoinensis HOM05D005639 ORTHO05D007234 8.8e-136 488.0 519 52.8
AL7G32990 Arabidopsis lyrata HOM05D005639 ORTHO05D007234 1.5e-135 487.3 516 53.7
Thhalv10028589m.g Eutrema salsugineum HOM05D005639 ORTHO05D007234 7.4e-135 485.0 482 59.1
AUR62033065 Chenopodium quinoa HOM05D005639 ORTHO05D007234 1.7e-134 483.8 409 63.6
Oeu030450.1 Olea europaea HOM05D005639 ORTHO05D007234 1.2e-132 477.6 495 55.2
Sp6g03680 Schrenkiella parvula HOM05D005639 ORTHO05D007234 1.0e-131 474.6 524 55.9
CiPaw.10G033400 Carya illinoinensis HOM05D005639 ORTHO05D007234 2.9e-131 473.0 538 53.2
C09p32350 Brassica napus HOM05D005639 ORTHO05D007234 1.1e-130 471.1 503 56.1
Carub.0006s3332 Capsella rubella HOM05D005639 ORTHO05D007234 3.2e-130 469.5 483 53.2
BolC9t56080H Brassica oleracea HOM05D005639 ORTHO05D007234 7.2e-130 468.4 515 55.9
BraA09t38117Z Brassica rapa HOM05D005639 ORTHO05D007234 1.2e-129 467.6 512 55.7
EL10Ac4g08968 Beta vulgaris HOM05D005639 ORTHO05D007234 1.0e-128 464.5 504 58.5
CDE05G0927 Ceratophyllum demersum HOM05D005639 ORTHO05D007234 1.0e-128 464.5 515 57.5
AT4G05410 Arabidopsis thaliana HOM05D005639 ORTHO05D007234 3.9e-128 462.6 479 59.9
A09p25350 Brassica napus HOM05D005639 ORTHO05D007234 5.2e-128 462.2 509 55.6
AL6G49000 Arabidopsis lyrata HOM05D005639 ORTHO05D007234 6.7e-128 461.8 479 57.6
BcaB01g02559 Brassica carinata HOM05D005639 ORTHO05D007234 1.5e-127 460.7 517 57.1
A03p30310 Brassica napus HOM05D005639 ORTHO05D007234 6.3e-126 455.3 517 56.7
Zm00001eb218720 Zea mays HOM05D005639 ORTHO05D007234 5.3e-125 452.2 478 57.9
Zm00001eb050650 Zea mays HOM05D005639 ORTHO05D007234 1.5e-122 444.1 395 65.3
C03p36580 Brassica napus HOM05D005639 ORTHO05D007234 4.2e-122 442.6 513 55.9
AUR62042204 Chenopodium quinoa HOM05D005639 ORTHO05D007234 5.5e-122 442.2 410 60.0
BcaC01g06663 Brassica carinata HOM05D005639 ORTHO05D007234 1.6e-121 440.7 505 55.0
BolC3t15973H Brassica oleracea HOM05D005639 ORTHO05D007234 4.7e-121 439.1 503 55.1
BraA03t12214Z Brassica rapa HOM05D005639 ORTHO05D007234 2.0e-119 433.7 504 55.0
vmacro03440 Vaccinium macrocarpon HOM05D005639 ORTHO05D007234 4.8e-118 429.1 502 52.4
Os03g0625900 Oryza sativa ssp. japonica HOM05D005639 ORTHO05D007234 8.5e-115 418.3 511 53.6
AagrBONN_evm.TU.Sc2ySwM_228.3905 Anthoceros agrestis HOM05D005639 ORTHO05D007234 1.0e-112 411.4 431 58.2
Mapoly0012s0170 Marchantia polymorpha HOM05D005639 ORTHO05D007234 1.7e-110 404.1 519 50.7
Pp3c13_22280 Physcomitrium patens HOM05D005639 ORTHO05D007234 1.3e-102 377.9 533 48.0
Pp3c15_1000 Physcomitrium patens HOM05D005639 ORTHO05D007234 2.4e-101 373.6 538 47.4
HanXRQChr13g0407861 Helianthus annuus HOM05D005639 ORTHO05D007234 7.8e-100 368.6 352 64.5
Glyma.15G129100 Glycine max HOM05D005639 ORTHO05D007234 2.3e-91 340.5 261 65.1
SMO146G0033 Selaginella moellendorffii HOM05D005639 ORTHO05D007234 5.4e-85 319.3 435 48.3
CBR_g50978 Chara braunii HOM05D005639 ORTHO05D007234 8.3e-78 295.4 550 41.8
Actinidia13477 Actinidia chinensis HOM05D005639 ORTHO05D007234 1.9e-74 284.3 285 56.8
Actinidia13478 Actinidia chinensis HOM05D005639 ORTHO05D007234 1.3e-70 271.6 187 71.1
MCO15G200 Micromonas commoda HOM05D005639 ORTHO05D007234 2.8e-65 253.8 521 34.9
PRCOL_00004480 Prasinoderma coloniale HOM05D005639 ORTHO05D007234 1.6e-57 228.0 471 39.3
C06p38580 Brassica napus HOM05D005639 ORTHO05D007234 1.0e-51 208.8 279 43.0
Duzib235G0447 Durio zibethinus HOM05D005639 ORTHO05D007234 3.1e-48 197.2 223 48.0
Cre06.g278175 Chlamydomonas reinhardtii HOM05D005639 ORTHO05D007234 1.9e-45 188.0 464 31.9
BolC6t38950H Brassica oleracea HOM05D005639 ORTHO05D007234 6.0e-44 183.0 261 41.8
BcaB01g02186 Brassica carinata HOM05D005639 ORTHO05D007234 5.0e-22 110.2 131 45.0
Cfa027057 Carpinus fangiana HOM05D005639 ORTHO05D007234 7.2e-21 106.3 527 24.1
BcaC04g22046 Brassica carinata HOM05D001874 ORTHO05D002166 9.7e-18 95.9 90 55.6
BcaB07g31331 Brassica carinata HOM05D005639 ORTHO05D007234 3.7e-17 94.0 82 54.9
A08p03340 Brassica napus HOM05D005639 ORTHO05D001462 2.4e-16 91.3 186 35.5
A01p33050 Brassica napus HOM05D001874 ORTHO05D002166 8.5e-14 82.8 166 35.5
C08p21980 Brassica napus HOM05D005639 ORTHO05D002166 8.5e-14 82.8 167 37.1
BcaB03g11915 Brassica carinata HOM05D005639 ORTHO05D007234 2.0e-10 71.6 131 34.4
Nitab4.5_0002059g0020 Nicotiana tabacum HOM05D000453 ORTHO05D000387 3.5e-07 60.8 118 33.1
QL10p012364 Quercus lobata HOM05D000453 ORTHO05D000387 4.5e-07 60.5 117 32.5
BolC4t27703H Brassica oleracea HOM05D000836 ORTHO05D000709 2.2e-06 58.2 225 24.9
arahy.Tifrunner.gnm1.ann1.4KG7L9 Arachis hypogaea HOM05D000453 ORTHO05D000387 6.5e-06 56.6 120 30.8
Thhalv10016303m.g Eutrema salsugineum HOM05D000836 ORTHO05D000709 6.5e-06 56.6 226 21.2
Oeu020857.1 Olea europaea HOM05D005639 ORTHO05D290761 6.5e-06 56.6 127 44.9
Cpa.g.sc77.59 Carica papaya HOM05D002332 ORTHO05D002509 8.5e-06 56.2 83 36.1


User provided reference genes

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