Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI32G0460 Tripterygium wilfordii HOM05D006688 ORTHO05D008550 8.5e-204 713.4 343 100.0
Haze_25940 Corylus avellana HOM05D006688 ORTHO05D008550 1.2e-146 523.5 380 67.1
Thecc.09G085200 Theobroma cacao HOM05D006688 ORTHO05D008550 1.4e-145 520.0 374 66.0
CiPaw.03G212300 Carya illinoinensis HOM05D006688 ORTHO05D008550 5.8e-144 514.6 381 66.1
Atru.chr7.1629 Acer truncatum HOM05D006688 ORTHO05D008550 2.9e-143 512.3 381 66.4
Gorai.010G084500 Gossypium raimondii HOM05D006688 ORTHO05D008550 5.4e-142 508.1 375 64.3
COL.COLO4_18173 Corchorus olitorius HOM05D006688 ORTHO05D008550 9.2e-142 507.3 375 65.1
Gohir.A06G073600 Gossypium hirsutum HOM05D006688 ORTHO05D008550 9.2e-142 507.3 375 64.3
Gohir.D06G072500 Gossypium hirsutum HOM05D006688 ORTHO05D008550 2.1e-141 506.1 375 64.0
TAR636G2732 Trochodendron aralioides HOM05D006688 ORTHO05D008550 6.0e-141 504.6 384 64.6
CsaV3_1G040620 Cucumis sativus L. HOM05D006688 ORTHO05D008550 5.1e-140 501.5 377 65.3
MD02G1082800 Malus domestica HOM05D006688 ORTHO05D008550 1.1e-139 500.4 383 63.4
Manes.03G036200 Manihot esculenta HOM05D006688 ORTHO05D008550 1.9e-139 499.6 380 64.5
RcHm_v2.0_Chr2g0093801 Rosa chinensis HOM05D006688 ORTHO05D008550 1.2e-138 496.9 381 64.3
MELO3C015492.2 Cucumis melo HOM05D006688 ORTHO05D008550 4.7e-138 495.0 377 64.2
Dinv42341 Davidia involucrata HOM05D006688 ORTHO05D008550 4.7e-138 495.0 376 64.4
QL02p062093 Quercus lobata HOM05D006688 ORTHO05D008550 2.0e-136 489.6 404 61.6
FvH4_1g07921 Fragaria vesca HOM05D006688 ORTHO05D008550 4.4e-136 488.4 379 62.5
arahy.Tifrunner.gnm1.ann1.UP5FVB Arachis hypogaea HOM05D006688 ORTHO05D008550 5.8e-136 488.0 381 63.0
FAN26G0248 Fragaria x ananassa HOM05D006688 ORTHO05D008550 5.8e-136 488.0 379 62.5
GSVIVG01015172001 Vitis vinifera HOM05D006688 ORTHO05D008550 5.8e-136 488.0 381 64.8
FAN28G0979 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.3e-135 486.9 379 62.3
Glyma.17G053100 Glycine max HOM05D006688 ORTHO05D008550 1.4e-134 483.4 381 62.2
Glyma.13G106300 Glycine max HOM05D006688 ORTHO05D008550 4.2e-134 481.9 384 62.2
FAN19G1103 Fragaria x ananassa HOM05D006688 ORTHO05D008550 2.7e-133 479.2 375 62.4
Potri.007G001500 Populus trichocarpa HOM05D006688 ORTHO05D008550 4.6e-133 478.4 381 63.0
arahy.Tifrunner.gnm1.ann1.XSA7KG Arachis hypogaea HOM05D006688 ORTHO05D008550 1.7e-132 476.5 385 61.8
arahy.Tifrunner.gnm1.ann1.LNAK8N Arachis hypogaea HOM05D006688 ORTHO05D008550 2.5e-131 472.6 370 63.2
Cfa003056 Carpinus fangiana HOM05D006688 ORTHO05D000625 5.6e-131 471.5 351 64.7
Lj7C679G14 Lonicera japonica HOM05D006688 ORTHO05D008550 2.8e-130 469.2 379 61.2
Sed0022183 Sechium edule HOM05D006688 ORTHO05D008550 3.6e-130 468.8 377 61.3
Duzib150G1545 Durio zibethinus HOM05D006688 ORTHO05D000625 6.2e-130 468.0 349 63.6
Aqoxy7G01159 Aquilegia oxysepala HOM05D006688 ORTHO05D008550 1.4e-129 466.8 378 60.1
CSS0016517 Camellia sinensis var. sinensis HOM05D006688 ORTHO05D008550 2.4e-129 466.1 377 61.3
Lj4g0022709 Lotus japonicus HOM05D006688 ORTHO05D008550 9.9e-128 460.7 380 59.7
PGR004G0903 Punica granatum HOM05D006688 ORTHO05D008550 4.9e-127 458.4 377 58.6
Sc08g0008600 Simmondsia chinensis HOM05D006688 ORTHO05D008550 6.4e-127 458.0 376 59.6
Phvul.003G134700 Phaseolus vulgaris HOM05D006688 ORTHO05D008550 1.4e-126 456.8 380 60.0
VMungo1215G1360 Vigna mungo HOM05D006688 ORTHO05D008550 2.4e-126 456.1 380 60.3
TPR.G9451 Trifolium pratense HOM05D006688 ORTHO05D008550 1.2e-125 453.8 387 58.9
Sabra07G0001100 Salix brachista HOM05D006688 ORTHO05D008550 2.7e-125 452.6 422 56.9
Hma1.2p1_0672F.1_g201000 Hydrangea macrophylla HOM05D006688 ORTHO05D008550 5.1e-124 448.4 376 59.3
Medtr4g125950 Medicago truncatula HOM05D006688 ORTHO05D008550 5.6e-123 444.9 384 58.6
Rhsim03G0231200 Rhododendron simsii HOM05D006688 ORTHO05D008550 1.6e-122 443.4 373 59.8
EL10Ac8g19177 Beta vulgaris HOM05D006688 ORTHO05D008550 4.8e-122 441.8 384 57.6
vmacro06303 Vaccinium macrocarpon HOM05D006688 ORTHO05D008550 8.1e-122 441.0 373 59.8
Thhalv10022744m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 1.8e-121 439.9 376 58.5
MSTRG.10542 Avicennia marina HOM05D006688 ORTHO05D008550 6.9e-121 438.0 379 59.4
ECA232G4161 Erigeron canadensis HOM05D006688 ORTHO05D008550 2.0e-120 436.4 379 55.9
MBI04_g35655_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 7.6e-120 434.5 375 58.9
Cc06_g11640 Coffea canephora HOM05D006688 ORTHO05D008550 9.9e-120 434.1 381 57.2
ClCG03G015420 Citrullus lanatus HOM05D006688 ORTHO05D008550 1.7e-119 433.3 357 60.2
PSO063G5109 Papaver somniferum HOM05D006688 ORTHO05D008550 2.9e-119 432.6 382 57.3
AT2G19430 Arabidopsis thaliana HOM05D006688 ORTHO05D008550 4.9e-119 431.8 376 57.2
Lalb_Chr20g0118781 Lupinus albus HOM05D006688 ORTHO05D008550 1.4e-118 430.3 380 56.1
Carub.0003s3371 Capsella rubella HOM05D006688 ORTHO05D008550 1.9e-118 429.9 376 56.6
BcaC06g36575 Brassica carinata HOM05D006688 ORTHO05D008550 5.5e-118 428.3 375 57.3
PSO782G0729 Papaver somniferum HOM05D006688 ORTHO05D008550 5.5e-118 428.3 382 56.5
C07p02720 Brassica napus HOM05D006688 ORTHO05D008550 1.6e-117 426.8 375 57.1
Hund06662 Selenicereus undatus HOM05D006688 ORTHO05D008550 1.6e-117 426.8 386 55.4
AL3G48850 Arabidopsis lyrata HOM05D006688 ORTHO05D008550 3.5e-117 425.6 376 56.4
BolC7t40672H Brassica oleracea HOM05D006688 ORTHO05D008550 3.5e-117 425.6 375 56.8
Nitab4.5_0001519g0100 Nicotiana tabacum HOM05D006688 ORTHO05D008550 3.5e-117 425.6 377 56.0
CARHR109870 Cardamine hirsuta HOM05D006688 ORTHO05D008550 6.0e-117 424.9 376 56.6
Sopen07g019540 Solanum pennellii HOM05D006688 ORTHO05D008550 6.0e-117 424.9 378 55.8
BraA07t27924Z Brassica rapa HOM05D006688 ORTHO05D008550 7.9e-117 424.5 375 57.1
Aa31LG8G16440 Aethionema arabicum HOM05D006688 ORTHO05D008550 1.3e-116 423.7 378 56.6
Migut.L01521 Erythranthe guttata HOM05D006688 ORTHO05D008550 6.7e-116 421.4 379 55.7
Oeu000312.2 Olea europaea HOM05D006688 ORTHO05D008550 4.3e-115 418.7 415 52.8
SalBow1G2294 Salvia bowleyana HOM05D006688 ORTHO05D008550 9.6e-115 417.5 402 53.2
BcaB03g16729 Brassica carinata HOM05D006688 ORTHO05D008550 1.6e-114 416.8 374 56.1
Ah.09g228060 Amaranthus hybridus HOM05D006688 ORTHO05D008550 6.2e-114 414.8 388 54.4
A07p01330 Brassica napus HOM05D006688 ORTHO05D008550 6.2e-114 414.8 375 56.5
SGA_v2.0_scaffold23G10037 Striga asiatica HOM05D006688 ORTHO05D008550 1.5e-112 410.2 403 54.1
AUR62029033 Chenopodium quinoa HOM05D006688 ORTHO05D008550 4.5e-112 408.7 383 53.8
Sp3g32810 Schrenkiella parvula HOM05D006688 ORTHO05D008550 2.2e-111 406.4 376 54.0
Ca_21292_v3 Cicer arietinum L. HOM05D006688 ORTHO05D008550 8.4e-111 404.4 388 54.4
Nitab4.5_0003606g0020 Nicotiana tabacum HOM05D006688 ORTHO05D008550 1.4e-110 403.7 369 54.7
THA.LOC104814631 Tarenaya hassleriana HOM05D006688 ORTHO05D008550 9.3e-110 401.0 381 54.3
FAN23G3127 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.3e-108 397.1 379 54.6
unitig_578.g16412 Utricularia gibba HOM05D006688 ORTHO05D008550 1.8e-108 396.7 379 53.3
Nn8g38791 Nelumbo nucifera HOM05D006688 ORTHO05D008550 8.7e-108 394.4 353 56.7
Prupe.7G205900 Prunus persica HOM05D006688 ORTHO05D008550 1.1e-107 394.0 303 61.1
Peaxi162Scf00494g00088 Petunia axillaris HOM05D006688 ORTHO05D008550 3.3e-107 392.5 376 55.1
MBI04_g12191_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 2.2e-106 389.8 358 55.9
DCAR_010507 Daucus carota HOM05D006688 ORTHO05D008550 4.8e-106 388.7 375 52.0
Eucgr.C03417 Eucalyptus grandis HOM05D006688 ORTHO05D008550 4.8e-106 388.7 380 54.7
Lsat_1_v5_gn_5_143161 Lactuca sativa HOM05D006688 ORTHO05D008550 8.2e-106 387.9 376 50.8
FAN26G2887 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.7e-103 380.2 299 61.5
Psat7g043880 Pisum sativum HOM05D006688 ORTHO05D008550 7.9e-101 371.3 307 59.9
MD15G1210900 Malus domestica HOM05D006688 ORTHO05D008550 2.0e-99 366.7 393 50.4
AUR62033933 Chenopodium quinoa HOM05D006688 ORTHO05D008550 1.6e-93 347.1 409 46.2
CDE04G2495 Ceratophyllum demersum HOM05D006688 ORTHO05D008550 2.2e-90 336.7 353 50.7
CANSAT56G4018 Cannabis sativa HOM05D006688 ORTHO05D008550 1.4e-89 334.0 231 66.7
HanXRQChr10g0319491 Helianthus annuus HOM05D006688 ORTHO05D008550 4.1e-89 332.4 390 46.9
HPP92_007651 Vanilla planifolia HOM05D006688 ORTHO05D008550 9.1e-89 331.3 461 41.6
ATR0789G107 Amborella trichopoda HOM05D006688 ORTHO05D008550 1.0e-87 327.8 362 49.2
Zm00001eb310980 Zea mays HOM05D006688 ORTHO05D008550 2.2e-82 310.1 377 45.1
Actinidia38457 Actinidia chinensis HOM05D006688 ORTHO05D008550 3.5e-80 302.8 373 47.2
Mapoly0100s0025 Marchantia polymorpha HOM05D006688 ORTHO05D008550 3.6e-69 266.2 381 39.6
Ciclev10009613m.g Citrus clementina HOM05D006688 ORTHO05D008550 3.7e-58 229.6 196 60.7
Os09g0363600 Oryza sativa ssp. japonica HOM05D006688 ORTHO05D008550 8.3e-58 228.4 276 44.6
Ciclev10009794m.g Citrus clementina HOM05D006688 ORTHO05D008550 2.3e-55 220.3 150 67.3
Cpa.g.sc28.142 Carica papaya HOM05D006688 ORTHO05D008550 3.1e-52 209.9 158 62.7
Lj7A540G53 Lonicera japonica HOM05D006688 ORTHO05D008550 4.1e-49 199.5 159 62.9
MCO14G146 Micromonas commoda HOM05D006688 ORTHO05D008550 2.7e-40 170.2 387 31.5
Solyc07g040780.4 Solanum lycopersicum HOM05D006688 ORTHO05D008550 4.3e-38 162.9 105 67.6
SEGI_08677 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 5.8e-27 125.9 131 50.4
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea HOM05D006688 ORTHO05D008550 8.4e-26 122.1 67 76.1
arahy.Tifrunner.gnm1.ann1.B17F7K Arachis hypogaea HOM05D006688 ORTHO05D008550 4.2e-25 119.8 66 75.8
Cpa.g.sc28.145 Carica papaya HOM05D006688 ORTHO05D008550 7.8e-24 115.5 130 49.2
Thhalv10023917m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 4.3e-22 109.8 127 48.0
Duzib168G0254 Durio zibethinus HOM05D006688 ORTHO05D008550 2.1e-21 107.5 64 79.7
Cre03.g180200 Chlamydomonas reinhardtii HOM05D006688 ORTHO05D008550 2.5e-14 84.0 428 25.0
SEGI_12408 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 9.3e-09 65.5 63 42.9
BcaB07g31609 Brassica carinata HOM05D006688 ORTHO05D008550 3.5e-08 63.5 119 37.0
CBR_g11128 Chara braunii HOM05D005544 ORTHO05D007303 5.1e-07 59.7 131 32.1
AUR62029853 Chenopodium quinoa HOM05D003769 ORTHO05D004521 2.5e-06 57.4 220 25.9
Prupe.5G219600 Prunus persica HOM05D003769 ORTHO05D004521 4.3e-06 56.6 162 25.9
Hund10227 Selenicereus undatus HOM05D003769 ORTHO05D000105 4.3e-06 56.6 220 26.4
DCAR_027817 Daucus carota HOM05D003769 ORTHO05D004521 5.6e-06 56.2 162 24.7
PSO017G1990 Papaver somniferum HOM05D003769 ORTHO05D004521 5.6e-06 56.2 162 25.9
unitig_8.g3057 Utricularia gibba HOM05D003769 ORTHO05D004521 5.6e-06 56.2 162 25.9
CDE03G0125 Ceratophyllum demersum HOM05D005961 ORTHO05D007391 7.4e-06 55.8 99 35.4
Glyma.02G198601 Glycine max HOM05D006688 ORTHO05D008550 7.4e-06 55.8 33 72.7
Nitab4.5_0000152g0140 Nicotiana tabacum HOM05D005961 ORTHO05D007391 7.4e-06 55.8 99 35.4
Nitab4.5_0001303g0010 Nicotiana tabacum HOM05D005961 ORTHO05D007391 7.4e-06 55.8 99 35.4
Sc10g0009500 Simmondsia chinensis HOM05D003769 ORTHO05D004521 7.4e-06 55.8 220 25.9
Nn1g08308 Nelumbo nucifera HOM05D005961 ORTHO05D007391 9.6e-06 55.5 99 34.3
Prupe.6G033200 Prunus persica HOM05D005961 ORTHO05D007391 9.6e-06 55.5 174 28.7


User provided reference genes

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