Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 6.6e-103 377.5 205 100.0
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 8.7e-63 244.2 205 69.3
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 1.0e-55 220.7 203 60.6
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 7.4e-54 214.5 200 58.0
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 1.1e-52 210.7 206 57.3
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 6.9e-52 208.0 193 58.0
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 2.0e-51 206.5 201 54.7
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.6e-51 206.1 193 60.6
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 2.6e-51 206.1 197 58.9
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 1.7e-50 203.4 195 60.0
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 6.5e-50 201.4 193 59.6
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 1.1e-49 200.7 193 59.1
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 1.9e-49 199.9 204 56.4
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 4.2e-49 198.7 196 59.2
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 9.4e-49 197.6 197 55.8
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 1.2e-48 197.2 211 52.6
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 7.9e-48 194.5 206 54.4
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 3.0e-47 192.6 205 55.6
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 8.8e-47 191.0 204 52.9
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 1.1e-46 190.7 201 52.7
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 9.7e-46 187.6 200 52.5
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 8.2e-45 184.5 203 52.2
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 2.4e-44 183.0 199 53.3
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 1.5e-43 180.3 205 51.2
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 1.7e-42 176.8 160 58.1
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 1.7e-42 176.8 202 52.0
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 1.7e-42 176.8 200 49.5
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 5.0e-42 175.3 197 50.3
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 6.5e-42 174.9 202 47.5
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 8.5e-42 174.5 198 48.5
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 1.4e-41 173.7 198 48.0
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 3.2e-41 172.6 200 48.5
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 7.2e-41 171.4 208 48.6
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 7.2e-41 171.4 208 48.6
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 1.6e-40 170.2 198 49.0
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 2.1e-40 169.9 202 50.0
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 2.7e-40 169.5 197 49.7
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 3.6e-40 169.1 199 48.2
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 3.6e-40 169.1 197 48.2
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 4.7e-40 168.7 162 55.6
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 4.7e-40 168.7 200 47.5
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 6.1e-40 168.3 197 49.2
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 7.9e-40 167.9 196 52.0
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 7.9e-40 167.9 201 47.3
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 1.4e-39 167.2 202 49.0
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 2.3e-39 166.4 156 55.8
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 3.9e-39 165.6 201 48.8
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 5.2e-39 165.2 208 44.2
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 1.1e-38 164.1 155 54.8
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 1.1e-38 164.1 201 45.8
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 1.1e-38 164.1 200 49.5
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 2.0e-38 163.3 203 45.8
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 2.0e-38 163.3 202 48.0
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 2.6e-38 162.9 197 47.7
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 2.6e-38 162.9 197 47.7
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 2.6e-38 162.9 198 47.0
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 2.6e-38 162.9 198 47.0
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 2.6e-38 162.9 158 54.4
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 4.4e-38 162.2 159 54.1
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 5.7e-38 161.8 159 54.1
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 5.7e-38 161.8 204 46.1
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 5.7e-38 161.8 156 54.5
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 5.7e-38 161.8 196 49.0
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 9.7e-38 161.0 160 52.5
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 9.7e-38 161.0 193 48.2
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 1.3e-37 160.6 207 47.8
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 1.3e-37 160.6 196 49.0
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 2.2e-37 159.8 165 53.3
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 2.8e-37 159.5 203 48.8
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 2.8e-37 159.5 209 47.4
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 3.7e-37 159.1 202 46.5
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.7e-37 159.1 174 52.9
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 1.1e-36 157.5 159 53.5
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 1.1e-36 157.5 208 45.7
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 1.8e-36 156.8 201 45.3
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 2.4e-36 156.4 203 47.3
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 4.1e-36 155.6 156 53.2
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 5.3e-36 155.2 165 48.5
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 7.0e-36 154.8 164 48.2
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 7.0e-36 154.8 159 52.8
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 1.2e-35 154.1 206 44.7
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 1.6e-35 153.7 199 47.2
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 7.7e-35 151.4 201 46.8
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 7.7e-35 151.4 160 51.9
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 1.7e-34 150.2 151 55.0
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 7.2e-33 144.8 201 45.3
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 3.6e-32 142.5 265 37.4
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 6.1e-32 141.7 149 49.0
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 4.4e-30 135.6 153 47.7
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 1.7e-29 133.7 204 43.6
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 6.3e-29 131.7 230 38.3
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 1.8e-28 130.2 157 39.5
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 1.8e-28 130.2 167 42.5
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 3.1e-28 129.4 205 37.6
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 5.3e-28 128.6 145 47.6
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 8.5e-26 121.3 149 45.6
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 7.2e-25 118.2 212 38.7
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 1.4e-23 114.0 143 45.5
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 6.5e-18 95.1 173 34.1
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 3.2e-17 92.8 170 32.4
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 3.0e-15 86.3 161 32.3
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 5.2e-15 85.5 91 53.8
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 8.3e-13 78.2 101 36.6


User provided reference genes

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