Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G6793 Trifolium pratense HOM05D007300 ORTHO05D009301 0.0e+00 1320.4 670 100.0
Medtr8g088030 Medicago truncatula HOM05D007300 ORTHO05D009301 5.5e-311 1070.5 673 81.1
Psat7g066760 Pisum sativum HOM05D007300 ORTHO05D009301 5.7e-305 1050.4 707 78.1
Ca_17871_v3 Cicer arietinum L. HOM05D007300 ORTHO05D009301 3.1e-303 1044.6 675 79.0
Lj4g0024386 Lotus japonicus HOM05D007300 ORTHO05D009301 4.8e-259 897.9 664 70.2
Glyma.08G121900 Glycine max HOM05D007300 ORTHO05D009301 2.6e-249 865.5 668 68.1
Glyma.05G164500 Glycine max HOM05D007300 ORTHO05D009301 2.4e-247 859.0 684 66.8
Lalb_Chr13g0295471 Lupinus albus HOM05D007300 ORTHO05D009301 6.9e-242 840.9 672 65.9
Phvul.002G244500 Phaseolus vulgaris HOM05D007300 ORTHO05D009301 3.2e-239 832.0 673 65.5
arahy.Tifrunner.gnm1.ann1.D64P8M Arachis hypogaea HOM05D007300 ORTHO05D009301 1.3e-232 810.1 678 63.7
arahy.Tifrunner.gnm1.ann1.FQ35JE Arachis hypogaea HOM05D007300 ORTHO05D009301 5.0e-232 808.1 690 62.8
VMungo0251G3397 Vigna mungo HOM05D007300 ORTHO05D009301 9.7e-228 793.9 665 63.9
Cfa001024 Carpinus fangiana HOM05D007300 ORTHO05D009301 3.3e-204 715.7 595 61.7
CiPaw.10G096200 Carya illinoinensis HOM05D007300 ORTHO05D009301 2.1e-198 696.4 594 58.6
QL05p060322 Quercus lobata HOM05D007300 ORTHO05D009301 6.1e-198 694.9 596 60.2
GSVIVG01021378001 Vitis vinifera HOM05D007300 ORTHO05D009301 1.4e-194 683.7 598 60.4
Potri.001G353800 Populus trichocarpa HOM05D007300 ORTHO05D009301 5.9e-193 678.3 668 53.7
Dinv32299 Davidia involucrata HOM05D007300 ORTHO05D009301 2.5e-191 672.9 671 55.6
FAN21G2574 Fragaria x ananassa HOM05D007300 ORTHO05D009301 3.0e-189 666.0 594 57.9
Haze_05485 Corylus avellana HOM05D007300 ORTHO05D009301 8.8e-189 664.5 692 52.6
RcHm_v2.0_Chr5g0012901 Rosa chinensis HOM05D007300 ORTHO05D009301 1.2e-188 664.1 594 57.9
Ciclev10014510m.g Citrus clementina HOM05D007300 ORTHO05D009301 4.9e-187 658.7 595 57.5
FvH4_3g06410 Fragaria vesca HOM05D007300 ORTHO05D009301 4.9e-187 658.7 597 57.1
MD05G1291800 Malus domestica HOM05D007300 ORTHO05D009301 1.1e-186 657.5 619 56.4
Prupe.4G073700 Prunus persica HOM05D007300 ORTHO05D009301 2.4e-186 656.4 617 56.1
TAR627G1006 Trochodendron aralioides HOM05D007300 ORTHO05D009301 3.8e-184 649.0 666 52.1
CSS0020184 Camellia sinensis var. sinensis HOM05D007300 ORTHO05D009301 5.0e-184 648.7 594 57.6
TWI73G0852 Tripterygium wilfordii HOM05D007300 ORTHO05D009301 2.1e-182 643.3 595 55.8
Sabra16G0232700 Salix brachista HOM05D007300 ORTHO05D009301 3.6e-182 642.5 686 50.6
ClCG03G007190 Citrullus lanatus HOM05D007300 ORTHO05D009301 4.7e-182 642.1 591 55.5
Actinidia19486 Actinidia chinensis HOM05D007300 ORTHO05D009301 4.0e-181 639.0 594 55.9
Thecc.06G157700 Theobroma cacao HOM05D007300 ORTHO05D009301 2.0e-180 636.7 612 53.8
FAN11G2841 Fragaria x ananassa HOM05D007300 ORTHO05D009301 8.3e-179 631.3 658 51.8
Gorai.011G040700 Gossypium raimondii HOM05D007300 ORTHO05D009301 7.8e-177 624.8 601 54.2
CANSAT35G1474 Cannabis sativa HOM05D007300 ORTHO05D009301 1.7e-176 623.6 603 54.6
Gohir.D10G038600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 1.7e-176 623.6 606 53.8
Cpa.g.sc17.110 Carica papaya HOM05D007300 ORTHO05D009301 5.0e-176 622.1 613 52.0
Gohir.A10G037600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 3.3e-175 619.4 677 50.1
Atru.chr10.1398 Acer truncatum HOM05D007300 ORTHO05D009301 2.8e-174 616.3 559 56.9
Atru.chr10.1407 Acer truncatum HOM05D007300 ORTHO05D009301 8.0e-174 614.8 559 56.9
COL.COLO4_22798 Corchorus olitorius HOM05D007300 ORTHO05D009301 3.4e-172 609.4 599 54.3
CsaV3_1G032780 Cucumis sativus L. HOM05D007300 ORTHO05D009301 8.3e-171 604.7 593 52.3
Peaxi162Scf00649g00027 Petunia axillaris HOM05D007300 ORTHO05D009301 1.2e-169 600.9 595 54.5
Manes.17G064900 Manihot esculenta HOM05D007300 ORTHO05D009301 7.8e-169 598.2 596 53.4
Nitab4.5_0003714g0040 Nicotiana tabacum HOM05D007300 ORTHO05D009301 2.3e-168 596.7 602 53.7
Nitab4.5_0001283g0060 Nicotiana tabacum HOM05D007300 ORTHO05D009301 2.5e-167 593.2 595 53.6
Oeu021524.1 Olea europaea HOM05D007300 ORTHO05D009301 2.5e-167 593.2 618 52.1
Eucgr.D00343 Eucalyptus grandis HOM05D007300 ORTHO05D009301 2.9e-163 579.7 595 52.3
CAN.G257.51 Capsicum annuum HOM05D007300 ORTHO05D009301 7.1e-162 575.1 598 53.0
PGSC0003DMG400003073 Solanum tuberosum HOM05D007300 ORTHO05D009301 1.7e-160 570.5 595 52.4
Aqoxy1G01857 Aquilegia oxysepala HOM05D007300 ORTHO05D009301 6.6e-160 568.5 635 48.3
Solyc02g071280.3 Solanum lycopersicum HOM05D007300 ORTHO05D009301 8.6e-160 568.2 595 51.6
DCAR_027959 Daucus carota HOM05D007300 ORTHO05D009301 1.9e-159 567.0 606 50.7
MBI10_g02388_MAGBIO Magnolia biondii HOM05D007300 ORTHO05D009301 3.3e-159 566.2 612 49.5
Duzib235G1110 Durio zibethinus HOM05D007300 ORTHO05D009301 4.3e-159 565.8 612 50.3
HanXRQChr04g0119571 Helianthus annuus HOM05D007300 ORTHO05D009301 2.1e-158 563.5 668 47.5
Lsat_1_v5_gn_7_31040 Lactuca sativa HOM05D007300 ORTHO05D009301 3.6e-158 562.8 668 47.8
Sopen02g020340 Solanum pennellii HOM05D007300 ORTHO05D009301 1.8e-157 560.5 595 51.3
SGA_v2.0_scaffold1G00132 Striga asiatica HOM05D007300 ORTHO05D009301 1.8e-157 560.5 604 50.7
ECA236G2360 Erigeron canadensis HOM05D007300 ORTHO05D009301 1.5e-156 557.4 594 49.8
SalBow8G1735 Salvia bowleyana HOM05D007300 ORTHO05D009301 5.4e-154 548.9 590 50.7
Nn3g20905 Nelumbo nucifera HOM05D007300 ORTHO05D009301 7.1e-154 548.5 554 53.4
Lj1C1181T32 Lonicera japonica HOM05D007300 ORTHO05D009301 9.2e-154 548.1 618 49.4
Thhalv10000812m.g Eutrema salsugineum HOM05D007300 ORTHO05D009301 3.5e-153 546.2 608 46.5
Migut.M00959 Erythranthe guttata HOM05D007300 ORTHO05D009301 6.0e-153 545.4 660 47.1
THA.LOC104827733 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 1.3e-152 544.3 610 47.2
Aa31LG9G6430 Aethionema arabicum HOM05D007300 ORTHO05D009301 1.7e-152 543.9 621 46.7
Carub.0008s0147 Capsella rubella HOM05D007300 ORTHO05D009301 1.9e-151 540.4 663 43.7
AT5G46420 Arabidopsis thaliana HOM05D007300 ORTHO05D009301 2.5e-151 540.0 612 46.4
CARHR175340 Cardamine hirsuta HOM05D007300 ORTHO05D009301 1.2e-150 537.7 614 47.6
AUR62027555 Chenopodium quinoa HOM05D007300 ORTHO05D009301 1.2e-150 537.7 604 49.0
BolC7t43517H Brassica oleracea HOM05D007300 ORTHO05D009301 6.8e-149 531.9 608 46.5
AL8G11990 Arabidopsis lyrata HOM05D007300 ORTHO05D009301 1.5e-148 530.8 677 44.2
Sp2g11270 Schrenkiella parvula HOM05D007300 ORTHO05D009301 4.4e-148 529.3 615 46.3
A06p45940 Brassica napus HOM05D007300 ORTHO05D009301 7.6e-148 528.5 654 45.0
Sc05g0006590 Simmondsia chinensis HOM05D007300 ORTHO05D009301 9.9e-148 528.1 600 47.5
C07p29650 Brassica napus HOM05D007300 ORTHO05D009301 1.3e-147 527.7 608 46.1
AUR62035801 Chenopodium quinoa HOM05D007300 ORTHO05D009301 5.4e-146 522.3 619 47.2
PSO541G4163 Papaver somniferum HOM05D007300 ORTHO05D009301 5.4e-146 522.3 607 47.0
PGR044G1273 Punica granatum HOM05D007300 ORTHO05D009301 9.3e-146 521.5 572 48.8
BraA06t27457Z Brassica rapa HOM05D007300 ORTHO05D009301 1.6e-145 520.8 640 45.9
FAN16G1565 Fragaria x ananassa HOM05D007300 ORTHO05D009301 1.5e-140 504.2 486 55.6
HPP92_023296 Vanilla planifolia HOM05D007300 ORTHO05D009301 4.5e-132 476.1 681 40.5
EL10Ac8g19794 Beta vulgaris HOM05D007300 ORTHO05D009301 3.2e-122 443.4 602 43.7
ATR1153G036 Amborella trichopoda HOM05D007300 ORTHO05D009301 5.5e-122 442.6 660 40.0
Sed0024786 Sechium edule HOM05D007300 ORTHO05D009301 1.0e-112 411.8 377 55.4
unitig_92.g28150 Utricularia gibba HOM05D007300 ORTHO05D009301 6.7e-104 382.5 524 42.9
HPP92_023271 Vanilla planifolia HOM05D007300 ORTHO05D009301 5.9e-92 342.8 679 33.0
PSO675G3105 Papaver somniferum HOM05D007300 ORTHO05D009301 2.9e-91 340.5 357 50.7
SEGI_38698 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 3.7e-86 323.6 700 29.7
MELO3C002704.2 Cucumis melo HOM05D007300 ORTHO05D009301 1.4e-77 295.0 360 45.3
Zm00001eb296050 Zea mays HOM05D007300 ORTHO05D009301 1.7e-75 288.1 347 45.2
Mapoly0019s0078 Marchantia polymorpha HOM05D007300 ORTHO05D009301 1.8e-69 268.1 679 29.2
CDE06G2820 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 2.0e-68 264.6 393 41.2
Pp3c15_14250 Physcomitrium patens HOM05D007300 ORTHO05D009301 1.4e-61 241.9 544 29.8
AagrBONN_evm.TU.Sc2ySwM_228.1844 Anthoceros agrestis HOM05D007300 ORTHO05D004905 3.2e-61 240.7 533 31.7
Os05g0566300 Oryza sativa ssp. japonica HOM05D007300 ORTHO05D009301 3.3e-58 230.7 208 54.3
Zm00001eb349440 Zea mays HOM05D007300 ORTHO05D009301 1.1e-40 172.6 177 49.2
Gorai.004G093400 Gossypium raimondii HOM05D007300 ORTHO05D009301 2.8e-33 147.9 114 58.8
Gohir.D08G088700 Gossypium hirsutum HOM05D007300 ORTHO05D009301 3.1e-32 144.4 118 56.8
SEGI_17563 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 1.1e-26 125.9 155 38.7
MCO05G669 Micromonas commoda HOM05D007300 ORTHO05D009301 3.6e-25 120.9 228 32.9
Cre03.g191950 Chlamydomonas reinhardtii HOM05D007300 ORTHO05D009301 6.7e-19 100.1 212 28.3
Pp3c4_17200 Physcomitrium patens HOM05D003927 ORTHO05D004905 1.8e-16 92.0 435 21.4
Zm00001eb184690 Zea mays HOM05D007300 ORTHO05D009301 3.1e-16 91.3 82 47.6
CDE06G1765 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 1.7e-14 85.5 158 34.8
Haze_26176 Corylus avellana HOM05D003927 ORTHO05D004905 3.4e-07 61.2 231 23.4
THA.LOC104798460 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 5.8e-07 60.5 137 32.1


User provided reference genes

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