Gene: Nitab4.5_0001283g0060
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0001283g0060
- Transcript Identifier Nitab4.5_0001283g0060.1
- Gene Type Coding gene
- Location Nitab4.5_0001283 : 399907-405708 : negative
Gene Family Information
- ID HOM05D007300
- #Genes/#Species 107/88
- Phylogenetic origin
- ID ORTHO05D009301
- #Genes/#Species 105/87
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nitab4.5_0001283g0060.1
- SR1-identifier Nta03g24140.1
Descriptions
- Description RimM protein, PRC-barrel domain, PRC-barrel-like, Translation protein, beta-barrel domain, 16S rRNA processing protein RimM
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006364 | IEA | InterPro | rRNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043022 | IEA | InterPro | ribosome binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G46420 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G46420 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR009000 | Translation protein, beta-barrel domain superfamily |
| IPR002676 | RimM, N-terminal |
| IPR029044 | Nucleotide-diphospho-sugar transferases |
| IPR011961 | 16S rRNA processing protein RimM |
| IPR011033 | PRC-barrel-like superfamily |
| IPR039741 | UDP-sugar pyrophosphorylase |
| IPR027275 | PRC-barrel domain |
| IPR036976 | RimM, N-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |