Gene: Carub.0008s0147

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s0147
  • Transcript Identifier Carub.0008s0147.1
  • Gene Type Coding gene
  • Location scaffold_8 : 561829-564657 : negative

Gene Family Information

  • ID HOM05D007300
  • #Genes/#Species 107/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s0147.v1.1
  • pacid 39251864
  • synonym Carubv10027818m.g

Descriptions

  • Description PTHR11952:SF10 - RIMM-LIKE 16S RRNA PROCESSING PROTEIN
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
InterProrRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043022
IEA
InterProribosome binding
GO:0070569
IEA
InterProuridylyltransferase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G46420

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G46420

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029044 Nucleotide-diphospho-sugar transferases
IPR011033 PRC-barrel-like superfamily
IPR011961 16S rRNA processing protein RimM
IPR002618 UDPGP family
IPR009000 Translation protein, beta-barrel domain superfamily
IPR002676 RimM, N-terminal
IPR027275 PRC-barrel domain
IPR036976 RimM, N-terminal domain superfamily
IPR039741 UDP-sugar pyrophosphorylase
Mapman id Description
35.1 not assigned.annotated