Gene: PGSC0003DMG400003073

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400003073
  • Transcript Identifier PGSC0003DMT400007946
  • Gene Type Coding gene
  • Location ST4.03ch02 : 30501252-30510994 : positive

Gene Family Information

  • ID HOM05D007300
  • #Genes/#Species 107/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37427210
  • id PGSC0003DMG400003073.v4.03
  • uniprot M0ZTT0

Descriptions

  • Description 16S rRNA processing protein RimM family
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing
GO:0006048
IBA
GOA DatabaseUDP-N-acetylglucosamine biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043022
IEA
GOA Databaseribosome binding
GO:0043022
IEA
InterProribosome binding
GO:0003977
IBA
GOA DatabaseUDP-N-acetylglucosamine diphosphorylase activity
GO:0003729
IEA
GOA DatabasemRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IEA
InterProribosome
GO:0005737
IEA
GOA Databasecytoplasm
GO:0009507
IEA
GOA Databasechloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036976 RimM, N-terminal domain superfamily
IPR029044 Nucleotide-diphospho-sugar transferases
IPR011033 PRC-barrel-like superfamily
IPR011961 16S rRNA processing protein RimM
IPR009000 Translation protein, beta-barrel domain superfamily
IPR002676 RimM, N-terminal
IPR039741 UDP-sugar pyrophosphorylase
IPR027275 PRC-barrel domain
Mapman id Description
35.1 not assigned.annotated