Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 1.6e-266 922.2 466 100.0
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 6.0e-184 647.9 383 86.4
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 3.1e-180 635.6 382 84.3
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 7.6e-163 577.8 371 80.9
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 9.9e-155 550.8 379 76.8
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 1.2e-152 543.9 380 73.7
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 4.2e-145 518.8 379 72.0
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 6.7e-143 511.5 379 71.2
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 2.8e-141 506.1 375 70.4
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 8.4e-138 494.6 373 69.7
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 8.2e-133 478.0 374 67.4
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 3.1e-132 476.1 374 67.1
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 2.0e-115 420.2 369 60.7
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 1.6e-112 410.6 390 57.4
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 6.1e-112 408.7 383 58.0
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 2.0e-110 403.7 373 58.7
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 4.5e-107 392.5 374 56.7
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 1.0e-106 391.3 387 55.0
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.5e-105 387.5 410 53.2
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 1.9e-105 387.1 374 56.1
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 8.0e-104 381.7 384 55.2
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 1.8e-103 380.6 389 53.7
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 1.5e-102 377.5 387 51.7
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 3.3e-102 376.3 378 53.4
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 3.7e-101 372.9 379 54.4
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 6.3e-101 372.1 383 54.3
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 1.4e-100 370.9 380 54.5
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 9.1e-100 368.2 366 52.7
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 4.5e-99 365.9 391 51.7
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.9e-98 363.2 378 54.0
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 3.8e-98 362.8 351 55.8
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 1.1e-97 361.3 374 52.4
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 1.5e-97 360.9 372 52.4
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 2.5e-97 360.1 378 53.2
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 4.2e-97 359.4 369 52.8
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 7.2e-97 358.6 363 53.2
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 2.1e-96 357.1 375 53.3
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 8.0e-96 355.1 398 49.7
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 1.4e-95 354.4 373 52.8
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 1.4e-95 354.4 372 51.6
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 3.0e-95 353.2 381 53.8
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 4.0e-95 352.8 373 52.5
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 6.8e-95 352.1 384 51.6
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 8.8e-95 351.7 375 51.7
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 2.0e-94 350.5 335 61.8
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 5.7e-94 349.0 385 53.0
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 1.3e-93 347.8 390 49.0
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 2.2e-93 347.1 369 52.3
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 2.8e-93 346.7 305 59.0
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 6.3e-93 345.5 387 50.4
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 1.4e-92 344.4 391 51.4
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 1.8e-92 344.0 373 51.5
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 1.8e-92 344.0 373 51.2
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 2.4e-92 343.6 373 51.2
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 4.1e-92 342.8 377 50.9
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 5.4e-92 342.4 364 52.2
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 7.0e-92 342.0 391 50.9
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 7.0e-92 342.0 371 50.1
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 3.5e-91 339.7 325 56.0
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 4.5e-91 339.3 377 50.9
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 7.7e-91 338.6 367 52.0
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 2.2e-90 337.0 371 50.7
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 3.8e-90 336.3 371 50.7
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 2.5e-89 333.6 378 49.2
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 3.2e-89 333.2 370 51.9
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 5.5e-89 332.4 369 51.8
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 7.2e-89 332.0 367 50.1
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 2.1e-88 330.5 373 49.6
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 2.7e-88 330.1 378 50.3
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 4.7e-88 329.3 376 50.5
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 1.8e-87 327.4 380 51.3
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 1.2e-86 324.7 370 50.0
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 2.0e-86 323.9 370 49.5
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 2.6e-86 323.6 371 49.3
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 3.4e-86 323.2 377 50.9
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 7.5e-86 322.0 368 50.0
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 1.3e-85 321.2 370 49.5
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 1.3e-85 321.2 370 49.5
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 2.4e-84 317.0 376 50.0
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 4.1e-84 316.2 449 43.9
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 1.5e-81 307.8 340 51.2
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 3.3e-81 306.6 363 49.3
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 4.3e-81 306.2 352 50.9
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 8.9e-79 298.5 385 43.1
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 2.0e-78 297.4 378 45.8
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 4.9e-77 292.7 373 46.1
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 9.5e-73 278.5 275 52.0
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 1.0e-71 275.0 383 44.9
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 1.3e-66 258.1 288 46.9
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.7e-66 257.7 322 43.8
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 8.6e-66 255.4 575 34.6
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 9.2e-60 235.3 276 44.6
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 4.0e-55 219.9 310 39.7
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 1.3e-50 204.9 174 58.0
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 3.3e-49 200.3 193 56.0
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 5.6e-49 199.5 186 57.0
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 9.9e-46 188.7 385 33.2
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.9e-45 187.2 116 73.3
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 4.2e-44 183.3 225 46.7
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 2.6e-38 164.1 212 46.2
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 5.8e-38 162.9 378 31.7
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.3e-37 161.8 161 52.8
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.1e-35 154.5 159 54.1
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 2.3e-34 151.0 186 45.7
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 9.0e-31 139.0 257 40.5
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 1.2e-30 138.7 104 59.6
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 1.3e-24 118.6 111 58.6
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 3.7e-24 117.1 132 47.7
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 1.1e-20 105.5 147 44.2
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 3.7e-08 63.9 132 27.3
CDE02G2376 Ceratophyllum demersum HOM05D001245 ORTHO05D004475 2.6e-06 57.8 85 36.5


User provided reference genes

Program Settings