Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23996 Trifolium pratense HOM05D004511 ORTHO05D005348 2.0e-222 775.4 382 100.0
Medtr1g045670 Medicago truncatula HOM05D004511 ORTHO05D005348 2.0e-169 599.4 410 72.7
Psat6g108520 Pisum sativum HOM05D004511 ORTHO05D005348 1.6e-163 579.7 409 71.1
Lj6g0021678 Lotus japonicus HOM05D004511 ORTHO05D005348 9.9e-161 570.5 408 68.4
Glyma.10G130700 Glycine max HOM05D004511 ORTHO05D005348 5.4e-151 538.1 408 65.7
Glyma.20G073500 Glycine max HOM05D004511 ORTHO05D005348 1.2e-145 520.4 409 64.1
Phvul.007G232900 Phaseolus vulgaris HOM05D004511 ORTHO05D005348 7.6e-145 517.7 409 63.8
QL06p021350 Quercus lobata HOM05D004511 ORTHO05D005348 4.3e-140 501.9 409 62.8
CiPaw.01G177000 Carya illinoinensis HOM05D004511 ORTHO05D005348 9.6e-140 500.7 409 62.6
Prupe.1G050200 Prunus persica HOM05D004511 ORTHO05D005348 4.8e-139 498.4 408 62.5
arahy.Tifrunner.gnm1.ann1.QET6JI Arachis hypogaea HOM05D004511 ORTHO05D005348 9.0e-138 494.2 403 61.3
MD13G1223200 Malus domestica HOM05D004511 ORTHO05D005348 9.0e-138 494.2 408 62.0
Lalb_Chr02g0150721 Lupinus albus HOM05D004511 ORTHO05D005348 4.5e-137 491.9 401 61.6
arahy.Tifrunner.gnm1.ann1.Z900IQ Arachis hypogaea HOM05D004511 ORTHO05D005348 1.0e-136 490.7 403 61.0
FvH4_4g05000 Fragaria vesca HOM05D004511 ORTHO05D005348 2.2e-136 489.6 408 61.3
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 2.2e-136 489.6 408 61.3
CANSAT78G2334 Cannabis sativa HOM05D004511 ORTHO05D005348 5.5e-135 485.0 408 60.5
RcHm_v2.0_Chr4g0395811 Rosa chinensis HOM05D004511 ORTHO05D005348 7.1e-135 484.6 408 60.8
Gohir.D09G232000 Gossypium hirsutum HOM05D004511 ORTHO05D005348 3.0e-133 479.2 408 60.0
Gorai.006G254800 Gossypium raimondii HOM05D004511 ORTHO05D005348 3.0e-133 479.2 408 60.0
Gohir.A09G230900 Gossypium hirsutum HOM05D004511 ORTHO05D005348 1.5e-132 476.9 408 59.8
Thecc.04G266800 Theobroma cacao HOM05D004511 ORTHO05D005348 1.5e-132 476.9 408 59.6
Ciclev10004190m.g Citrus clementina HOM05D004511 ORTHO05D005348 1.3e-131 473.8 410 59.0
Dinv29796 Davidia involucrata HOM05D004511 ORTHO05D005348 2.2e-131 473.0 403 58.3
Sed0014740 Sechium edule HOM05D004511 ORTHO05D005348 2.8e-131 472.6 404 59.4
TAR365G1143 Trochodendron aralioides HOM05D004511 ORTHO05D005348 1.1e-130 470.7 402 57.7
ClCG05G003940 Citrullus lanatus HOM05D004511 ORTHO05D005348 1.8e-130 469.9 408 59.3
CsaV3_3G011610 Cucumis sativus L. HOM05D004511 ORTHO05D005348 4.5e-129 465.3 408 57.4
Duzib151G0197 Durio zibethinus HOM05D004511 ORTHO05D005348 1.0e-128 464.2 408 58.1
TWI73G0808 Tripterygium wilfordii HOM05D004511 ORTHO05D005348 6.5e-128 461.5 408 57.1
Potri.010G065000 Populus trichocarpa HOM05D004511 ORTHO05D005348 8.5e-128 461.1 408 57.6
GSVIVG01027931001 Vitis vinifera HOM05D004511 ORTHO05D005348 1.4e-127 460.3 408 57.8
PGR004G0717 Punica granatum HOM05D004511 ORTHO05D005348 7.2e-127 458.0 409 57.9
COL.COLO4_15984 Corchorus olitorius HOM05D004511 ORTHO05D005348 6.1e-126 454.9 441 54.4
THA.LOC104821629 Tarenaya hassleriana HOM05D004511 ORTHO05D005348 1.0e-125 454.1 408 55.6
Sc11g0002730 Simmondsia chinensis HOM05D004511 ORTHO05D005348 7.4e-124 448.0 408 56.1
Nn1g02989 Nelumbo nucifera HOM05D004511 ORTHO05D005348 4.8e-123 445.3 403 55.3
Aqoxy5G00136 Aquilegia oxysepala HOM05D004511 ORTHO05D005348 3.1e-122 442.6 402 54.7
ECA248G2418 Erigeron canadensis HOM05D004511 ORTHO05D005348 7.7e-121 438.0 408 53.4
Migut.G00563 Erythranthe guttata HOM05D004511 ORTHO05D005348 1.7e-120 436.8 408 54.4
CARHR100420 Cardamine hirsuta HOM05D004511 ORTHO05D005348 8.5e-120 434.5 403 54.3
Sp3g22130 Schrenkiella parvula HOM05D004511 ORTHO05D005348 8.5e-120 434.5 403 55.1
Thhalv10002376m.g Eutrema salsugineum HOM05D004511 ORTHO05D005348 2.5e-119 433.0 404 54.7
Actinidia27093 Actinidia chinensis HOM05D004511 ORTHO05D005348 7.2e-119 431.4 403 54.8
Ah.01g020260 Amaranthus hybridus HOM05D004511 ORTHO05D005348 2.1e-118 429.9 408 54.7
BcaC06g35683 Brassica carinata HOM05D004511 ORTHO05D005348 2.1e-118 429.9 404 55.0
C07p12050 Brassica napus HOM05D004511 ORTHO05D005348 2.1e-118 429.9 404 55.0
Carub.0003s2466 Capsella rubella HOM05D004511 ORTHO05D005348 2.1e-118 429.9 403 54.8
SGA_v2.0_scaffold67G22677 Striga asiatica HOM05D004511 ORTHO05D005348 3.6e-118 429.1 402 54.0
Nitab4.5_0005154g0040 Nicotiana tabacum HOM05D004511 ORTHO05D005348 4.7e-118 428.7 406 53.9
BolC7t41673H Brassica oleracea HOM05D004511 ORTHO05D005348 6.1e-118 428.3 404 54.7
AT3G24320 Arabidopsis thaliana HOM05D004511 ORTHO05D005348 1.0e-117 427.6 403 54.3
MSTRG.9851 Avicennia marina HOM05D004511 ORTHO05D005348 1.0e-117 427.6 403 53.6
Solyc09g090870.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 1.4e-117 427.2 403 54.6
Cc03_g06420 Coffea canephora HOM05D004511 ORTHO05D005348 2.3e-117 426.4 356 58.7
A07p07990 Brassica napus HOM05D004511 ORTHO05D005348 3.0e-117 426.0 405 54.6
BraA07t28586Z Brassica rapa HOM05D004511 ORTHO05D005348 3.0e-117 426.0 405 54.6
BcaB06g26614 Brassica carinata HOM05D004511 ORTHO05D005348 3.9e-117 425.6 404 54.5
Sopen09g033830 Solanum pennellii HOM05D004511 ORTHO05D005348 1.1e-116 424.1 403 54.3
Aa31LG8G11050 Aethionema arabicum HOM05D004511 ORTHO05D005348 1.5e-116 423.7 408 53.7
PSO210G5810 Papaver somniferum HOM05D004511 ORTHO05D005348 3.3e-116 422.5 343 58.3
Nitab4.5_0001041g0180 Nicotiana tabacum HOM05D004511 ORTHO05D005348 4.4e-116 422.2 405 53.1
PSO170G1037 Papaver somniferum HOM05D004511 ORTHO05D005348 3.7e-115 419.1 343 58.0
HanXRQChr01g0023051 Helianthus annuus HOM05D004511 ORTHO05D005348 8.2e-115 417.9 408 52.2
Zm00001eb426210 Zea mays HOM05D004511 ORTHO05D005348 7.0e-114 414.8 354 55.6
EL10Ac9g21855 Beta vulgaris HOM05D004511 ORTHO05D005348 1.3e-112 410.6 446 49.1
AUR62011461 Chenopodium quinoa HOM05D004511 ORTHO05D005348 5.0e-112 408.7 408 51.7
Os04g0507000 Oryza sativa ssp. japonica HOM05D004511 ORTHO05D005348 1.1e-111 407.5 354 55.6
HanXRQChr06g0182821 Helianthus annuus HOM05D004511 ORTHO05D005348 1.2e-110 404.1 360 55.0
MELO3C006369.2 Cucumis melo HOM05D004511 ORTHO05D005348 1.6e-110 403.7 324 60.5
FAN17G0167 Fragaria x ananassa HOM05D004511 ORTHO05D005348 3.0e-109 399.4 376 56.1
ATR0787G210 Amborella trichopoda HOM05D004511 ORTHO05D005348 6.7e-109 398.3 360 52.8
HPP92_015182 Vanilla planifolia HOM05D004511 ORTHO05D005348 1.3e-107 394.0 342 57.3
Atru.chr4.1900 Acer truncatum HOM05D004511 ORTHO05D005348 1.2e-105 387.5 234 74.8
AL3G39770 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 1.0e-104 384.4 413 50.1
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 2.2e-104 383.3 317 59.0
unitig_747.g21671 Utricularia gibba HOM05D004511 ORTHO05D005348 4.2e-103 379.0 366 51.9
Eucgr.H02905 Eucalyptus grandis HOM05D004511 ORTHO05D005348 5.5e-103 378.6 294 63.9
SEGI_11740 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 7.2e-103 378.3 348 54.0
AUR62016594 Chenopodium quinoa HOM05D004511 ORTHO05D005348 1.0e-101 374.4 408 48.5
Oeu061869.1 Olea europaea HOM05D004511 ORTHO05D005348 5.7e-100 368.6 234 71.4
Rhsim04G0171100 Rhododendron simsii HOM05D004511 ORTHO05D005348 3.1e-98 362.8 399 49.4
Lsat_1_v5_gn_2_41221 Lactuca sativa HOM05D004511 ORTHO05D005348 4.1e-98 362.5 246 67.9
Peaxi162Scf00531g00610 Petunia axillaris HOM05D004511 ORTHO05D005348 7.7e-97 358.2 346 52.3
Lj6A637T63 Lonicera japonica HOM05D004511 ORTHO05D005348 1.3e-96 357.5 229 72.9
Ca_11884_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 4.7e-94 349.0 315 57.5
Ca_07387_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 6.1e-94 348.6 343 55.1
vmacro08562 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 7.0e-90 335.1 204 76.0
Ca_26419_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.6e-89 334.0 336 54.5
Mapoly0067s0046 Marchantia polymorpha HOM05D004511 ORTHO05D005348 2.3e-85 320.1 359 45.1
Pp3c8_22090 Physcomitrium patens HOM05D004511 ORTHO05D005348 2.0e-84 317.0 337 47.8
CSS0022858 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 5.9e-81 305.4 186 74.2
CSS0015875 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 8.6e-80 301.6 186 73.1
CAN.G524.10 Capsicum annuum HOM05D004511 ORTHO05D005348 5.8e-76 288.9 182 72.5
AL2G22890 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 6.4e-75 285.4 219 62.6
CDE08G1197 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 7.8e-73 278.5 204 64.2
Hund00489 Selenicereus undatus HOM05D004511 ORTHO05D005348 5.0e-72 275.8 200 63.0
Pp3c23_17640 Physcomitrium patens HOM05D004511 ORTHO05D005348 6.6e-72 275.4 325 41.8
SMO364G0324 Selaginella moellendorffii HOM05D004511 ORTHO05D005348 5.6e-71 272.3 228 56.1
SHI00812 Sapria himalayana HOM05D004511 ORTHO05D005348 4.0e-69 266.2 177 68.4
Manes.03G157900 Manihot esculenta HOM05D004511 ORTHO05D005348 4.6e-65 252.7 158 75.9
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 3.2e-58 229.9 193 61.7
Hund00476 Selenicereus undatus HOM05D004511 ORTHO05D005348 1.2e-57 228.0 158 67.7
VMungo0720G0419 Vigna mungo HOM05D004511 ORTHO05D005348 3.1e-53 213.4 181 60.8
CBR_g22304 Chara braunii HOM05D000019 ORTHO05D000002 5.1e-48 196.1 207 44.0
VMungo0720G1651 Vigna mungo HOM05D004511 ORTHO05D005348 1.4e-45 188.0 226 47.3
PRCOL_00002937 Prasinoderma coloniale HOM05D004511 ORTHO05D005348 1.1e-29 135.2 226 37.2
Sopen09g033860 Solanum pennellii HOM05D004511 ORTHO05D005348 1.8e-29 134.4 104 64.4
CSS0010114 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 2.3e-24 117.5 123 49.6
Hund00475 Selenicereus undatus HOM05D004511 ORTHO05D005348 3.0e-24 117.1 202 35.1
Solyc09g090890.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 7.4e-23 112.5 98 58.2
MCO07G727 Micromonas commoda HOM05D004511 ORTHO05D005348 1.4e-21 108.2 247 33.6
CSS0021105 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 5.3e-21 106.3 92 53.3
Haze_11474 Corylus avellana HOM05D004511 ORTHO05D005348 2.7e-17 94.0 71 54.9
Ca_21499_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 3.3e-15 87.0 94 46.8
SEGI_26830 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 1.7e-11 74.7 64 51.6
SHI00817 Sapria himalayana HOM05D004511 ORTHO05D005348 5.0e-11 73.2 120 35.0
Glyma.10G121600 Glycine max HOM05D004511 ORTHO05D005348 3.6e-09 67.0 113 36.3
Glyma.10G121578 Glycine max HOM05D004511 ORTHO05D005348 6.1e-09 66.2 115 35.7
Atru.chr4.2015 Acer truncatum HOM05D004511 ORTHO05D005348 7.9e-09 65.9 33 75.8
Glyma.10G121584 Glycine max HOM05D004511 ORTHO05D005348 1.4e-08 65.1 113 35.4
ATR0787G159 Amborella trichopoda HOM05D004511 ORTHO05D005348 5.7e-07 59.7 38 63.2
Glyma.10G121560 Glycine max HOM05D004511 ORTHO05D005348 9.7e-07 58.9 130 30.8


User provided reference genes

Program Settings