Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22729 Trifolium pratense HOM05D002640 ORTHO05D018190 7.2e-37 156.8 80 100.0
Ca_08696_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 2.6e-31 138.3 76 93.4
Lalb_Chr24g0400581 Lupinus albus HOM05D002640 ORTHO05D003231 3.3e-26 121.3 75 82.7
Lalb_Chr14g0365421 Lupinus albus HOM05D002640 ORTHO05D003231 4.3e-26 120.9 74 85.1
Psat0s699g0040 Pisum sativum HOM05D002640 ORTHO05D003231 1.3e-25 119.4 74 86.5
Glyma.20G114933 Glycine max HOM05D002640 ORTHO05D018190 1.2e-23 112.8 74 82.4
Glyma.19G125600 Glycine max HOM05D002640 ORTHO05D003231 5.9e-23 110.5 67 86.6
Phvul.001G117200 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 5.9e-23 110.5 67 86.6
VMungo1383G1765 Vigna mungo HOM05D002640 ORTHO05D003231 5.9e-23 110.5 67 86.6
Glyma.03G121000 Glycine max HOM05D002640 ORTHO05D003231 1.7e-22 109.0 71 81.7
Lj1g0022797 Lotus japonicus HOM05D002640 ORTHO05D003231 2.5e-21 105.1 73 79.5
Actinidia37853 Actinidia chinensis HOM05D002640 ORTHO05D003231 1.2e-20 102.8 78 76.9
arahy.Tifrunner.gnm1.ann1.FM1LAN Arachis hypogaea HOM05D002640 ORTHO05D003231 1.2e-20 102.8 68 83.8
arahy.Tifrunner.gnm1.ann1.PY7FNU Arachis hypogaea HOM05D002640 ORTHO05D003231 1.2e-20 102.8 68 83.8
Dinv10811 Davidia involucrata HOM05D002640 ORTHO05D003231 1.2e-20 102.8 78 76.9
CiPaw.09G052100 Carya illinoinensis HOM05D002640 ORTHO05D003231 2.1e-20 102.1 75 77.3
Dinv13155 Davidia involucrata HOM05D002640 ORTHO05D003231 2.1e-20 102.1 78 75.6
Lj2C412G3 Lonicera japonica HOM05D002640 ORTHO05D003231 4.7e-20 100.9 78 74.4
CSS0028254 Camellia sinensis var. sinensis HOM05D002640 ORTHO05D003231 6.1e-20 100.5 78 74.4
DCAR_020604 Daucus carota HOM05D002640 ORTHO05D003231 7.9e-20 100.1 74 67.6
Medtr7g088700 Medicago truncatula HOM05D002640 ORTHO05D003231 7.9e-20 100.1 74 74.3
Cc06_g21410 Coffea canephora HOM05D002640 ORTHO05D003231 1.4e-19 99.4 75 72.0
PGR142G0829 Punica granatum HOM05D002640 ORTHO05D003231 1.8e-19 99.0 76 75.0
AUR62018416 Chenopodium quinoa HOM05D002640 ORTHO05D003231 3.0e-19 98.2 76 61.8
Oeu022996.1 Olea europaea HOM05D002640 ORTHO05D003231 3.0e-19 98.2 76 72.4
MSTRG.6300 Avicennia marina HOM05D002640 ORTHO05D003231 3.9e-19 97.8 75 70.7
Oeu044234.2 Olea europaea HOM05D002640 ORTHO05D003231 5.1e-19 97.4 76 71.1
Potri.006G031900 Populus trichocarpa HOM05D002640 ORTHO05D003231 5.1e-19 97.4 76 72.4
Actinidia38202 Actinidia chinensis HOM05D002640 ORTHO05D003231 1.1e-18 96.3 76 75.0
Haze_20287 Corylus avellana HOM05D002640 ORTHO05D003231 1.1e-18 96.3 76 75.0
SalBow6G2030 Salvia bowleyana HOM05D002640 ORTHO05D003231 1.5e-18 95.9 77 68.8
MELO3C008653.2 Cucumis melo HOM05D002640 ORTHO05D003231 2.6e-18 95.1 74 73.0
CsaV3_2G009910 Cucumis sativus L. HOM05D002640 ORTHO05D003231 2.6e-18 95.1 74 73.0
Potri.016G029200 Populus trichocarpa HOM05D002640 ORTHO05D003231 2.6e-18 95.1 76 71.1
Manes.08G162401 Manihot esculenta HOM05D002640 ORTHO05D003231 3.3e-18 94.7 76 72.4
QL07p013828 Quercus lobata HOM05D002640 ORTHO05D003231 3.3e-18 94.7 76 76.3
SGA_v2.0_scaffold66G22308 Striga asiatica HOM05D002640 ORTHO05D003231 3.3e-18 94.7 75 70.7
TAR623G0852 Trochodendron aralioides HOM05D002640 ORTHO05D003231 3.3e-18 94.7 78 70.5
ClCG11G010450 Citrullus lanatus HOM05D002640 ORTHO05D003231 5.7e-18 94.0 74 71.6
Nitab4.5_0000062g0270 Nicotiana tabacum HOM05D002640 ORTHO05D003231 5.7e-18 94.0 75 66.7
Nitab4.5_0003225g0040 Nicotiana tabacum HOM05D002640 ORTHO05D003231 5.7e-18 94.0 75 66.7
GSVIVG01025815001 Vitis vinifera HOM05D002640 ORTHO05D003231 5.7e-18 94.0 77 72.7
Ciclev10013566m.g Citrus clementina HOM05D002640 ORTHO05D003231 7.4e-18 93.6 75 74.7
Migut.J01553 Erythranthe guttata HOM05D002640 ORTHO05D003231 7.4e-18 93.6 73 69.9
Peaxi162Scf00601g00007 Petunia axillaris HOM05D002640 ORTHO05D003231 7.4e-18 93.6 75 66.7
Sed0027584 Sechium edule HOM05D002640 ORTHO05D003231 9.7e-18 93.2 73 71.2
CANSAT64G1505 Cannabis sativa HOM05D002640 ORTHO05D003231 1.3e-17 92.8 74 75.7
Dinv13151 Davidia involucrata HOM05D002640 ORTHO05D003231 1.3e-17 92.8 79 70.9
HanXRQChr04g0125591 Helianthus annuus HOM05D002640 ORTHO05D003231 1.7e-17 92.4 74 63.5
CDE08G0416 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 8.2e-17 90.1 79 70.9
vmacro08975 Vaccinium macrocarpon HOM05D002640 ORTHO05D003231 8.2e-17 90.1 79 68.4
HPP92_011291 Vanilla planifolia HOM05D002640 ORTHO05D003231 8.2e-17 90.1 77 64.9
CAN.G128.94 Capsicum annuum HOM05D002640 ORTHO05D003231 1.4e-16 89.4 75 66.7
Sopen10g031530 Solanum pennellii HOM05D002640 ORTHO05D003231 1.4e-16 89.4 75 66.7
Migut.J01544 Erythranthe guttata HOM05D002640 ORTHO05D003231 2.4e-16 88.6 73 67.1
QL07p013799 Quercus lobata HOM05D002640 ORTHO05D003231 2.4e-16 88.6 76 72.4
PGSC0003DMG400028197 Solanum tuberosum HOM05D002640 ORTHO05D003231 2.4e-16 88.6 75 66.7
Sabra16G0033200 Salix brachista HOM05D002640 ORTHO05D003231 3.1e-16 88.2 71 71.8
Hund19066 Selenicereus undatus HOM05D002640 ORTHO05D003231 4.1e-16 87.8 76 61.8
Ah.04g150530 Amaranthus hybridus HOM05D002640 ORTHO05D003231 7.0e-16 87.0 74 60.8
Prupe.8G211800 Prunus persica HOM05D002640 ORTHO05D003231 7.0e-16 87.0 75 69.3
TWI53G2001 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 9.1e-16 86.7 75 72.0
CDE09G1137 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 1.6e-15 85.9 79 67.1
HanXRQChr15g0486251 Helianthus annuus HOM05D002640 ORTHO05D018190 1.6e-15 85.9 78 62.8
Solyc10g081020.2 Solanum lycopersicum HOM05D002640 ORTHO05D003231 1.6e-15 85.9 75 65.3
MBI11_g01739_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 3.5e-15 84.7 79 69.6
HanXRQChr06g0177131 Helianthus annuus HOM05D002640 ORTHO05D003231 4.5e-15 84.3 77 62.3
Nn7g37023 Nelumbo nucifera HOM05D002640 ORTHO05D003231 5.9e-15 84.0 79 65.8
Rhsim04G0118000 Rhododendron simsii HOM05D002640 ORTHO05D003231 5.9e-15 84.0 77 66.2
MD00G1108000 Malus domestica HOM05D002640 ORTHO05D003231 2.2e-14 82.0 74 67.6
TWI77G0284 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 2.2e-14 82.0 75 72.0
FAN19G2288 Fragaria x ananassa HOM05D002640 ORTHO05D003231 5.0e-14 80.9 71 66.2
FAN26G3239 Fragaria x ananassa HOM05D002640 ORTHO05D003231 5.0e-14 80.9 71 66.2
FAN28G1238 Fragaria x ananassa HOM05D002640 ORTHO05D003231 5.0e-14 80.9 71 66.2
unitig_21.g20682 Utricularia gibba HOM05D002640 ORTHO05D003231 5.0e-14 80.9 75 61.3
FvH4_1g29220 Fragaria vesca HOM05D002640 ORTHO05D003231 6.5e-14 80.5 71 66.2
PSO384G3455 Papaver somniferum HOM05D002640 ORTHO05D003231 1.1e-13 79.7 77 59.7
Sc19g0007910 Simmondsia chinensis HOM05D002640 ORTHO05D003231 1.9e-13 79.0 77 58.4
EL10Ac3g07304 Beta vulgaris HOM05D002640 ORTHO05D003231 2.5e-13 78.6 66 62.1
PSO339G4261 Papaver somniferum HOM05D002640 ORTHO05D003231 2.5e-13 78.6 77 58.4
ATR0782G064 Amborella trichopoda HOM05D002640 ORTHO05D003231 3.2e-13 78.2 80 61.2
Prupe.7G019900 Prunus persica HOM05D002640 ORTHO05D003231 5.5e-13 77.4 67 68.7
Aqoxy1G00051 Aquilegia oxysepala HOM05D002640 ORTHO05D003231 2.1e-12 75.5 78 56.4
FAN23G1939 Fragaria x ananassa HOM05D002640 ORTHO05D003231 2.1e-12 75.5 68 64.7
SEGI_20723 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 2.1e-12 75.5 80 60.0
SEGI_00617 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 2.7e-12 75.1 80 60.0
MBI19_g47879_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 4.7e-12 74.3 80 57.5
DCAR_013529 Daucus carota HOM05D002640 ORTHO05D003231 6.1e-12 73.9 78 60.3
Lsat_1_v5_gn_8_83860 Lactuca sativa HOM05D002640 ORTHO05D003231 1.8e-11 72.4 78 56.4
RcHm_v2.0_Chr3g0494601 Rosa chinensis HOM05D002640 ORTHO05D003231 2.3e-11 72.0 68 66.2
Atru.chr1.1380 Acer truncatum HOM05D002640 ORTHO05D003231 3.0e-11 71.6 71 66.2
Cpa.g.sc1617.1 Carica papaya HOM05D002640 ORTHO05D003231 3.3e-10 68.2 49 75.5
A07p32820 Brassica napus HOM05D002640 ORTHO05D003231 1.7e-09 65.9 69 55.1
C06p39050 Brassica napus HOM05D002640 ORTHO05D003231 1.7e-09 65.9 69 55.1
BolC6t38997H Brassica oleracea HOM05D002640 ORTHO05D003231 1.7e-09 65.9 69 55.1
BraA07t30909Z Brassica rapa HOM05D002640 ORTHO05D003231 1.7e-09 65.9 69 55.1
AUR62041298 Chenopodium quinoa HOM05D002640 ORTHO05D003231 1.4e-08 62.8 59 61.0
Thhalv10012314m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 1.8e-08 62.4 70 51.4
Lj1C1081G2 Lonicera japonica HOM05D002640 ORTHO05D003231 1.8e-08 62.4 75 53.3
Actinidia18716 Actinidia chinensis HOM05D002640 ORTHO05D003231 5.3e-08 60.8 49 65.3
MBI13_g02373_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 7.0e-08 60.5 52 71.2
Aa31LG2G2460 Aethionema arabicum HOM05D002640 ORTHO05D003231 1.2e-07 59.7 64 56.2
COL.COLO4_25706 Corchorus olitorius HOM05D002640 ORTHO05D018190 1.2e-07 59.7 71 53.5
Actinidia15139 Actinidia chinensis HOM05D002640 ORTHO05D018190 2.7e-07 58.5 77 49.4
AagrBONN_evm.TU.Sc2ySwM_228.4939 Anthoceros agrestis HOM05D002640 ORTHO05D003231 1.0e-06 56.6 83 50.6
HPP92_011267 Vanilla planifolia HOM05D002640 ORTHO05D018190 1.0e-06 56.6 40 70.0
THA.LOC104805690 Tarenaya hassleriana HOM05D002640 ORTHO05D003231 5.0e-06 54.3 61 55.7
Lsat_1_v5_gn_9_32200 Lactuca sativa HOM05D002640 ORTHO05D003231 8.5e-06 53.5 85 45.9


User provided reference genes

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