Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20349 Trifolium pratense HOM05D003148 ORTHO05D030578 3.2e-22 107.5 52 100.0
TPR.G95 Trifolium pratense HOM05D003148 ORTHO05D030578 1.6e-21 105.1 52 98.1
Medtr3g050110 Medicago truncatula HOM05D003148 ORTHO05D003894 6.7e-20 99.8 51 92.2
Medtr3g050140 Medicago truncatula HOM05D003148 ORTHO05D003894 6.7e-20 99.8 51 92.2
Ca_14812_v3 Cicer arietinum L. HOM05D003148 ORTHO05D003894 2.0e-19 98.2 51 92.2
Phvul.006G039400 Phaseolus vulgaris HOM05D003148 ORTHO05D003894 3.3e-19 97.4 51 88.2
Psat5g183240 Pisum sativum HOM05D003148 ORTHO05D003894 3.3e-19 97.4 51 92.2
Glyma.08G313400 Glycine max HOM05D003148 ORTHO05D003894 5.7e-19 96.7 51 88.2
Lalb_Chr04g0248571 Lupinus albus HOM05D003148 ORTHO05D003894 1.7e-18 95.1 51 86.3
arahy.Tifrunner.gnm1.ann1.5UV8SN Arachis hypogaea HOM05D003148 ORTHO05D003894 2.2e-18 94.7 51 84.3
arahy.Tifrunner.gnm1.ann1.IVZB0M Arachis hypogaea HOM05D003148 ORTHO05D003894 2.2e-18 94.7 51 84.3
Glyma.02G289700 Glycine max HOM05D003148 ORTHO05D003894 2.8e-18 94.4 51 86.3
Glyma.14G025300 Glycine max HOM05D003148 ORTHO05D003894 2.8e-18 94.4 51 86.3
Glyma.19G036300 Glycine max HOM05D003148 ORTHO05D003894 2.8e-18 94.4 51 86.3
arahy.Tifrunner.gnm1.ann1.SAW44B Arachis hypogaea HOM05D003148 ORTHO05D003894 6.3e-18 93.2 51 86.3
Aa31LG8G7340 Aethionema arabicum HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
AL3G34360 Arabidopsis lyrata HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
AT1G50840 Arabidopsis thaliana HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
AT3G20540 Arabidopsis thaliana HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
BcaC05g27391 Brassica carinata HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
A05p19930 Brassica napus HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
A05p28320 Brassica napus HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
C05p33280 Brassica napus HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
C05p43810 Brassica napus HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
BolC5t32054H Brassica oleracea HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
BolC5t33096H Brassica oleracea HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
BraA05t20898Z Brassica rapa HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
BraA05t21714Z Brassica rapa HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
Carub.0001s3979 Capsella rubella HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
Carub.0003s2050 Capsella rubella HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
CiPaw.11G187400 Carya illinoinensis HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
Eucgr.F00964 Eucalyptus grandis HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
Thhalv10011195m.g Eutrema salsugineum HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
Thhalv10019969m.g Eutrema salsugineum HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
Sp1g37600 Schrenkiella parvula HOM05D003148 ORTHO05D003894 1.1e-17 92.4 51 84.3
arahy.Tifrunner.gnm1.ann1.FV4ICK Arachis hypogaea HOM05D003148 ORTHO05D003894 1.4e-17 92.0 51 86.3
Atru.chr2.3280 Acer truncatum HOM05D003148 ORTHO05D003894 1.8e-17 91.7 51 84.3
Ca_06307_v3 Cicer arietinum L. HOM05D003148 ORTHO05D003894 1.8e-17 91.7 50 86.0
Duzib213G0065 Durio zibethinus HOM05D003148 ORTHO05D003894 1.8e-17 91.7 51 82.4
Lj4g0014990 Lotus japonicus HOM05D003148 ORTHO05D003894 1.8e-17 91.7 51 84.3
Medtr5g092100 Medicago truncatula HOM05D003148 ORTHO05D003894 1.8e-17 91.7 50 86.0
PGR083G0390 Punica granatum HOM05D003148 ORTHO05D003894 1.8e-17 91.7 51 84.3
TPR.G29117 Trifolium pratense HOM05D003148 ORTHO05D003894 1.8e-17 91.7 50 86.0
AL1G58530 Arabidopsis lyrata HOM05D003148 ORTHO05D003894 2.4e-17 91.3 51 82.4
BcaB02g11185 Brassica carinata HOM05D003148 ORTHO05D003894 2.4e-17 91.3 51 82.4
Phvul.008G265700 Phaseolus vulgaris HOM05D003148 ORTHO05D003894 2.4e-17 91.3 51 84.3
VMungo0647G1963 Vigna mungo HOM05D003148 ORTHO05D003894 2.4e-17 91.3 51 84.3
ClCG10G005550 Citrullus lanatus HOM05D003148 ORTHO05D003894 3.1e-17 90.9 51 84.3
Psat2g015200 Pisum sativum HOM05D003148 ORTHO05D003894 3.1e-17 90.9 50 86.0
Sp3g18540 Schrenkiella parvula HOM05D003148 ORTHO05D003894 3.1e-17 90.9 51 82.4
CARHR096300 Cardamine hirsuta HOM05D003148 ORTHO05D003894 4.1e-17 90.5 51 82.4
CiPaw.12G128200 Carya illinoinensis HOM05D003148 ORTHO05D003894 4.1e-17 90.5 51 82.4
Ciclev10007282m.g Citrus clementina HOM05D003148 ORTHO05D003894 4.1e-17 90.5 51 82.4
FvH4_3g22230 Fragaria vesca HOM05D003148 ORTHO05D003894 4.1e-17 90.5 51 80.4
FAN11G2520 Fragaria x ananassa HOM05D003148 ORTHO05D003894 4.1e-17 90.5 51 80.4
FAN16G3453 Fragaria x ananassa HOM05D003148 ORTHO05D003894 4.1e-17 90.5 51 80.4
FAN21G1173 Fragaria x ananassa HOM05D003148 ORTHO05D003894 4.1e-17 90.5 51 80.4
Oeu062599.1 Olea europaea HOM05D003148 ORTHO05D003894 4.1e-17 90.5 48 85.4
Peaxi162Scf00450g00842 Petunia axillaris HOM05D003148 ORTHO05D003894 4.1e-17 90.5 51 78.4
QL08p011843 Quercus lobata HOM05D003148 ORTHO05D003894 4.1e-17 90.5 51 82.4
RcHm_v2.0_Chr5g0038301 Rosa chinensis HOM05D003148 ORTHO05D003894 4.1e-17 90.5 51 80.4
CARHR040890 Cardamine hirsuta HOM05D003148 ORTHO05D003894 5.3e-17 90.1 51 82.4
COL.COLO4_09635 Corchorus olitorius HOM05D003148 ORTHO05D003894 5.3e-17 90.1 51 82.4
Solyc07g064330.3 Solanum lycopersicum HOM05D003148 ORTHO05D003894 5.3e-17 90.1 51 78.4
PGSC0003DMG402013919 Solanum tuberosum HOM05D003148 ORTHO05D003894 5.3e-17 90.1 51 78.4
CsaV3_3G005270 Cucumis sativus L. HOM05D003148 ORTHO05D003894 7.0e-17 89.7 51 82.4
Gohir.A01G078100 Gossypium hirsutum HOM05D003148 ORTHO05D003894 7.0e-17 89.7 51 82.4
Gohir.D01G065200 Gossypium hirsutum HOM05D003148 ORTHO05D003894 7.0e-17 89.7 51 82.4
Gorai.002G086900 Gossypium raimondii HOM05D003148 ORTHO05D003894 7.0e-17 89.7 51 82.4
Oeu042923.1 Olea europaea HOM05D003148 ORTHO05D003894 7.0e-17 89.7 51 80.4
Lalb_Chr18g0049911 Lupinus albus HOM05D003148 ORTHO05D003894 9.1e-17 89.4 50 86.0
MD11G1221900 Malus domestica HOM05D003148 ORTHO05D003894 9.1e-17 89.4 51 80.4
Prupe.4G209500 Prunus persica HOM05D003148 ORTHO05D003894 9.1e-17 89.4 51 80.4
MSTRG.12966 Avicennia marina HOM05D003148 ORTHO05D003894 1.2e-16 89.0 51 80.4
Cfa020382 Carpinus fangiana HOM05D003148 ORTHO05D003894 1.6e-16 88.6 51 80.4
DCAR_022553 Daucus carota HOM05D003148 ORTHO05D003894 1.6e-16 88.6 51 80.4
Migut.H01840 Erythranthe guttata HOM05D003148 ORTHO05D003894 1.6e-16 88.6 51 78.4
HanXRQChr05g0159091 Helianthus annuus HOM05D003148 ORTHO05D003894 1.6e-16 88.6 51 80.4
HanXRQChr05g0159101 Helianthus annuus HOM05D003148 ORTHO05D003894 1.6e-16 88.6 51 80.4
HanXRQChr05g0159391 Helianthus annuus HOM05D003148 ORTHO05D003894 1.6e-16 88.6 51 80.4
Hma1.2p1_0938F.1_g239220 Hydrangea macrophylla HOM05D003148 ORTHO05D003894 1.6e-16 88.6 51 80.4
Lj1C869T19 Lonicera japonica HOM05D003148 ORTHO05D003894 1.6e-16 88.6 51 80.4
Nn1g07107 Nelumbo nucifera HOM05D003148 ORTHO05D003894 1.6e-16 88.6 51 80.4
Sed0003151 Sechium edule HOM05D003148 ORTHO05D003894 1.6e-16 88.6 51 82.4
TWI38G0810 Tripterygium wilfordii HOM05D003148 ORTHO05D003894 1.6e-16 88.6 51 80.4
TAR624G0080 Trochodendron aralioides HOM05D003148 ORTHO05D003894 1.6e-16 88.6 51 80.4
Aqoxy3G04136 Aquilegia oxysepala HOM05D003148 ORTHO05D003894 2.0e-16 88.2 51 78.4
Cpa.g.sc97.33 Carica papaya HOM05D003148 ORTHO05D003894 2.0e-16 88.2 51 80.4
AUR62018343 Chenopodium quinoa HOM05D003148 ORTHO05D003894 2.0e-16 88.2 51 78.4
AUR62030324 Chenopodium quinoa HOM05D003148 ORTHO05D003894 2.0e-16 88.2 51 78.4
Lj8A168T100 Lonicera japonica HOM05D003148 ORTHO05D003894 2.0e-16 88.2 51 80.4
Lj6g0019529 Lotus japonicus HOM05D003148 ORTHO05D003894 2.0e-16 88.2 51 82.4
Rhsim04G0002300 Rhododendron simsii HOM05D003148 ORTHO05D003894 2.0e-16 88.2 51 80.4
Thecc.07G043600 Theobroma cacao HOM05D003148 ORTHO05D003894 2.0e-16 88.2 51 80.4
RhsimUnG0252100 Rhododendron simsii HOM05D003148 ORTHO05D003894 2.7e-16 87.8 51 78.4
Actinidia09911 Actinidia chinensis HOM05D003148 ORTHO05D003894 3.5e-16 87.4 51 78.4
CDE05G0870 Ceratophyllum demersum HOM05D003148 ORTHO05D003894 3.5e-16 87.4 51 82.4
ECA246G3119 Erigeron canadensis HOM05D003148 ORTHO05D003894 3.5e-16 87.4 51 78.4
Lsat_1_v5_gn_1_29100 Lactuca sativa HOM05D003148 ORTHO05D003894 3.5e-16 87.4 51 78.4
Potri.011G136900 Populus trichocarpa HOM05D003148 ORTHO05D003894 3.5e-16 87.4 51 80.4
Sabra11G0122800 Salix brachista HOM05D003148 ORTHO05D003894 3.5e-16 87.4 51 80.4
THA.LOC104817879 Tarenaya hassleriana HOM05D003148 ORTHO05D003894 3.5e-16 87.4 49 83.7
EL10Ac3g07232 Beta vulgaris HOM05D003148 ORTHO05D003894 4.5e-16 87.0 51 76.5
Nitab4.5_0000622g0240 Nicotiana tabacum HOM05D003148 ORTHO05D003894 4.5e-16 87.0 51 76.5
Nitab4.5_0013016g0020 Nicotiana tabacum HOM05D003148 ORTHO05D003894 4.5e-16 87.0 51 76.5
Aqoxy1G03292 Aquilegia oxysepala HOM05D003148 ORTHO05D003894 5.9e-16 86.7 51 78.4
Hund19099 Selenicereus undatus HOM05D003148 ORTHO05D003894 5.9e-16 86.7 51 76.5
Sc19g0008220 Simmondsia chinensis HOM05D003148 ORTHO05D003894 5.9e-16 86.7 51 78.4
SGA_v2.0_scaffold9G05063 Striga asiatica HOM05D003148 ORTHO05D003894 5.9e-16 86.7 51 74.5
TAR626G0592 Trochodendron aralioides HOM05D003148 ORTHO05D003894 5.9e-16 86.7 51 78.4
Nn1g03580 Nelumbo nucifera HOM05D003148 ORTHO05D003894 7.7e-16 86.3 51 78.4
Manes.14G165664 Manihot esculenta HOM05D003148 ORTHO05D003894 1.0e-15 85.9 51 78.4
PSO541G1561 Papaver somniferum HOM05D003148 ORTHO05D003894 1.0e-15 85.9 51 78.4
PSO675G7850 Papaver somniferum HOM05D003148 ORTHO05D003894 1.0e-15 85.9 51 78.4
Potri.001G421300 Populus trichocarpa HOM05D003148 ORTHO05D003894 1.0e-15 85.9 51 80.4
HPP92_009350 Vanilla planifolia HOM05D003148 ORTHO05D003894 1.0e-15 85.9 51 78.4
Rhsim06G0215400 Rhododendron simsii HOM05D003148 ORTHO05D003894 1.7e-15 85.1 51 80.4
Atru.chr6.8 Acer truncatum HOM05D003148 ORTHO05D003894 2.2e-15 84.7 51 78.4
Nitab4.5_0000397g0350 Nicotiana tabacum HOM05D003148 ORTHO05D003894 2.9e-15 84.3 51 74.5
CDE01G0619 Ceratophyllum demersum HOM05D003148 ORTHO05D003894 3.8e-15 84.0 50 78.0
Dinv40737 Davidia involucrata HOM05D003148 ORTHO05D003894 5.0e-15 83.6 49 79.6
Duzib170G0998 Durio zibethinus HOM05D003148 ORTHO05D003894 5.0e-15 83.6 51 78.4
ATR0752G224 Amborella trichopoda HOM05D003148 ORTHO05D003894 6.5e-15 83.2 51 78.4
MSTRG.14430 Avicennia marina HOM05D003148 ORTHO05D003894 6.5e-15 83.2 51 76.5
Hund24589 Selenicereus undatus HOM05D003148 ORTHO05D003894 6.5e-15 83.2 51 72.5
Actinidia35330 Actinidia chinensis HOM05D003148 ORTHO05D003894 1.5e-14 82.0 48 79.2
Cc05_g13530 Coffea canephora HOM05D003148 ORTHO05D003894 1.5e-14 82.0 48 79.2
PSO017G6339 Papaver somniferum HOM05D003148 ORTHO05D003894 1.5e-14 82.0 50 78.0
CAN.G337.107 Capsicum annuum HOM05D003148 ORTHO05D003894 1.9e-14 81.6 53 73.6
MBI02_g28334_MAGBIO Magnolia biondii HOM05D003148 ORTHO05D003894 1.9e-14 81.6 49 79.6
Sopen07g032480 Solanum pennellii HOM05D003148 ORTHO05D003894 2.5e-14 81.3 63 63.5
Zm00001eb414740 Zea mays HOM05D003148 ORTHO05D003894 3.2e-14 80.9 51 74.5
Mapoly0039s0093 Marchantia polymorpha HOM05D003148 ORTHO05D003894 5.5e-14 80.1 50 76.0
GSVIVG01014163001 Vitis vinifera HOM05D003148 ORTHO05D003894 7.2e-14 79.7 50 76.0
Ah.13g076880 Amaranthus hybridus HOM05D001433 ORTHO05D005172 6.1e-13 76.6 70 55.7
AagrBONN_evm.TU.Sc2ySwM_228.5326 Anthoceros agrestis HOM05D003148 ORTHO05D003894 6.1e-13 76.6 50 70.0
SEGI_28554 Sequoiadendron giganteum HOM05D003148 ORTHO05D003894 6.1e-13 76.6 50 72.0
Haze_09651 Corylus avellana HOM05D003148 ORTHO05D003894 1.4e-12 75.5 74 55.4
Zm00001eb431790 Zea mays HOM05D003148 ORTHO05D003894 1.4e-12 75.5 48 72.9
Os04g0637400 Oryza sativa ssp. japonica HOM05D003148 ORTHO05D003894 1.8e-12 75.1 48 72.9
Aa31LG10G3300 Aethionema arabicum HOM05D003148 ORTHO05D003894 3.0e-12 74.3 83 50.6
Os08g0175300 Oryza sativa ssp. japonica HOM05D003148 ORTHO05D003894 3.0e-12 74.3 50 70.0
Pp3c14_14550 Physcomitrium patens HOM05D003148 ORTHO05D003894 4.0e-12 73.9 51 72.5
SMO356G0432 Selaginella moellendorffii HOM05D003148 ORTHO05D003894 4.0e-12 73.9 46 76.1
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 5.2e-12 73.6 51 70.6
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 8.8e-12 72.8 51 72.5
TPR.G14286 Trifolium pratense HOM05D003148 ORTHO05D030578 8.8e-12 72.8 34 97.1
MCO10G006 Micromonas commoda HOM05D003148 ORTHO05D003894 1.5e-11 72.0 50 66.0
Cfa020383 Carpinus fangiana HOM05D003148 ORTHO05D003894 5.7e-11 70.1 50 64.0
CBR_g50948 Chara braunii HOM05D003148 ORTHO05D003894 5.7e-11 70.1 50 64.0
Sabra16G0286100 Salix brachista HOM05D003148 ORTHO05D003894 1.1e-09 65.9 92 44.6
vmacro11740 Vaccinium macrocarpon HOM05D003148 ORTHO05D003894 1.1e-09 65.9 41 70.7
MELO3C000081.2 Cucumis melo HOM05D003148 ORTHO05D003894 9.1e-09 62.8 36 80.6
Lj6C83G1 Lonicera japonica HOM05D003148 ORTHO05D003894 9.1e-09 62.8 50 58.0
CSS0045288 Camellia sinensis var. sinensis HOM05D003148 ORTHO05D003894 2.7e-08 61.2 47 66.0
PRCOL_00004837 Prasinoderma coloniale HOM05D003148 ORTHO05D003894 3.5e-08 60.8 50 60.0
PRCOL_00004766 Prasinoderma coloniale HOM05D003148 ORTHO05D003894 7.7e-08 59.7 51 56.9
SHI31846 Sapria himalayana HOM05D003148 ORTHO05D030578 1.7e-07 58.5 32 81.2
Haze_09649 Corylus avellana HOM05D003148 ORTHO05D003894 2.2e-07 58.2 42 66.7


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