Gene: BraA05t20898Z
General Information
Structural Information
- Species Brassica rapa
- Gene Identifier BraA05t20898Z
- Transcript Identifier BraA05t20898Z
- Gene Type Coding gene
- Location A05 : 17230246-17236795 : positive
Gene Family Information
- ID HOM05D003148
- #Genes/#Species 217/97
- Phylogenetic origin
- ID ORTHO05D003894
- #Genes/#Species 200/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- uniprot A0A3P5Z5L2
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006260 | IEA | GOA Database | DNA replication | |
| GO:0006260 | IEA | InterPro | DNA replication | |
| GO:0033259 | ISO | PLAZA Integrative Orthology | plastid DNA replication | AT1G50840 |
| GO:0006264 | ISO | PLAZA Integrative Orthology | mitochondrial DNA replication | AT1G50840 |
| GO:0006261 | IEA | GOA Database | DNA-dependent DNA replication | |
| GO:0006261 | IEA | InterPro | DNA-dependent DNA replication | |
| GO:0006139 | IEA | GOA Database | nucleobase-containing compound metabolic process | |
| GO:0006139 | IEA | InterPro | nucleobase-containing compound metabolic process | |
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis | |
| GO:0071897 | IEA | GOA Database | DNA biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G50840 |
| GO:0008408 | IEA | GOA Database | 3'-5' exonuclease activity | |
| GO:0008408 | IEA | InterPro | 3'-5' exonuclease activity | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003887 | IEA | GOA Database | DNA-directed DNA polymerase activity | |
| GO:0003887 | IEA | InterPro | DNA-directed DNA polymerase activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT1G50840 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT1G50840 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G50840 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001098 | DNA-directed DNA polymerase, family A, palm domain |
| IPR002562 | 3'-5' exonuclease domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR002298 | DNA polymerase A |
| IPR024462 | Glycosyl-hydrolase family 116, N-terminal |
| IPR036397 | Ribonuclease H superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| Mapman id | Description |
|---|---|
| 13.5.1 | Cell cycle organisation.organellar DNA replication.DNA polymerase (POP) |