Gene: Pp3c24_16390
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c24_16390
- Transcript Identifier Pp3c24_16390V3.3
- Gene Type Coding gene
- Location Chr24 : 10762279-10769733 : negative
Gene Family Information
- ID HOM05D003148
- #Genes/#Species 217/97
- Phylogenetic origin
- ID ORTHO05D003894
- #Genes/#Species 200/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c24_16390V3.3
- pacid 32908792
- alias Phypa_198359
- alias Pp1s323_69V6
- uniprot A0A2K1IH16
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006139 | IEA | GOA Database | nucleobase-containing compound metabolic process | |
| GO:0006139 | IEA | InterPro | nucleobase-containing compound metabolic process | |
| GO:0033259 | ISO | PLAZA Integrative Orthology | plastid DNA replication | AT1G50840 |
| GO:0006264 | ISO | PLAZA Integrative Orthology | mitochondrial DNA replication | AT1G50840 |
| GO:0006302 | IBA | GOA Database | double-strand break repair | |
| GO:0006261 | IEA | GOA Database | DNA-dependent DNA replication | |
| GO:0006261 | IEA | InterPro | DNA-dependent DNA replication | |
| GO:0006260 | IEA | GOA Database | DNA replication | |
| GO:0006260 | IEA | InterPro | DNA replication | |
| GO:0071897 | IEA | GOA Database | DNA biosynthetic process | |
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G50840 |
| GO:0003887 | IBA IEA | GOA Database | DNA-directed DNA polymerase activity | |
| GO:0003887 | IEA | InterPro | DNA-directed DNA polymerase activity | |
| GO:0008408 | IEA | GOA Database | 3'-5' exonuclease activity | |
| GO:0008408 | IEA | InterPro | 3'-5' exonuclease activity | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT1G50840 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT1G50840 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G50840 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002562 | 3'-5' exonuclease domain |
| IPR001098 | DNA-directed DNA polymerase, family A, palm domain |
| IPR023153 | PSPTO4464-like domain superfamily |
| IPR006839 | Ribosome-associated, YjgA |
| IPR002298 | DNA polymerase A |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR036397 | Ribonuclease H superfamily |
| Mapman id | Description |
|---|---|
| 13.5.1 | Cell cycle organisation.organellar DNA replication.DNA polymerase (POP) |