Gene: Carub.0003s2050

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s2050
  • Transcript Identifier Carub.0003s2050.1
  • Gene Type Coding gene
  • Location scaffold_3 : 7348820-7353805 : positive

Gene Family Information

  • ID HOM05D003148
  • #Genes/#Species 217/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s2050.v1.1
  • pacid 39242657
  • synonym Carubv10016078m.g

Descriptions

  • Description K02335 - DNA polymerase I (DPO1, polA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
InterProDNA replication
GO:0006261
IEA
InterProDNA-dependent DNA replication
GO:0006139
IEA
InterPronucleobase-containing compound metabolic process
GO:0006264
ISO
PLAZA Integrative Orthologymitochondrial DNA replication AT3G20540
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair AT3G20540
GO:0033259
ISO
PLAZA Integrative Orthologyplastid DNA replication AT3G20540

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0008408
IEA
InterPro3'-5' exonuclease activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G20540

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G20540
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G20540

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001098 DNA-directed DNA polymerase, family A, palm domain
IPR002298 DNA polymerase A
IPR002562 3'-5' exonuclease domain
IPR036397 Ribonuclease H superfamily
IPR012337 Ribonuclease H-like superfamily
IPR043502 DNA/RNA polymerase superfamily
Mapman id Description
13.5.1 Cell cycle organisation.organellar DNA replication.DNA polymerase (POP)