Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17548 Trifolium pratense HOM05D000216 ORTHO05D000634 1.4e-54 216.1 110 100.0
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 8.6e-25 117.1 55 98.2
Psat4g147920 Pisum sativum HOM05D000216 ORTHO05D000634 8.6e-25 117.1 55 98.2
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 3.3e-24 115.2 55 96.4
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
arahy.Tifrunner.gnm1.ann1.KRC0HM Arachis hypogaea HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
BolSC44t60847H Brassica oleracea HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
BraSC140t45588Z Brassica rapa HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
CAN.G939.14 Capsicum annuum HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
MELO3C001093.2 Cucumis melo HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
Hma1.2p1_0094F.1_g047104 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
Lj2A1237T129 Lonicera japonica HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
Lj2P1224T100 Lonicera japonica HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
Lj2P1227T99 Lonicera japonica HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.6e-23 112.8 55 94.5
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
PGSC0003DMG400020296 Solanum tuberosum HOM05D000216 ORTHO05D000634 1.6e-23 112.8 55 94.5
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 3.6e-23 111.7 55 92.7
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 3.6e-23 111.7 55 92.7
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 3.6e-23 111.7 55 92.7
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 3.6e-23 111.7 55 92.7
SGA_v2.0_scaffold477G52216 Striga asiatica HOM05D000216 ORTHO05D000634 3.6e-23 111.7 55 92.7
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 3.6e-23 111.7 55 92.7
Psat5g134600 Pisum sativum HOM05D000216 ORTHO05D000634 6.2e-23 110.9 55 94.5
MELO3C027929.2 Cucumis melo HOM05D000216 ORTHO05D000634 8.1e-23 110.5 55 92.7
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 8.1e-23 110.5 55 92.7
Lalb_Chr09g0335371 Lupinus albus HOM05D000216 ORTHO05D000634 1.1e-22 110.2 63 87.3
Lalb_Chr22g0361661 Lupinus albus HOM05D000216 ORTHO05D000634 1.1e-22 110.2 63 87.3
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 1.1e-22 110.2 55 92.7
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 1.4e-22 109.8 55 92.7
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 1.4e-22 109.8 55 92.7
GSVIVG01019173001 Vitis vinifera HOM05D000216 ORTHO05D000634 1.4e-22 109.8 55 90.9
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 1.8e-22 109.4 63 85.7
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 1.8e-22 109.4 63 85.7
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.8e-22 109.4 55 90.9
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.4e-22 109.0 55 90.9
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 2.4e-22 109.0 63 84.1
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 3.1e-22 108.6 55 90.9
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 3.1e-22 108.6 55 90.9
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 3.1e-22 108.6 55 90.9
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 3.1e-22 108.6 55 90.9
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 3.1e-22 108.6 55 90.9
Lsat_1_v5_gn_9_5941 Lactuca sativa HOM05D000216 ORTHO05D000634 3.1e-22 108.6 55 90.9
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 3.1e-22 108.6 55 90.9
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 4.0e-22 108.2 63 84.1
CAN.G844.3 Capsicum annuum HOM05D000216 ORTHO05D000634 4.0e-22 108.2 55 89.1
SHI35296 Sapria himalayana HOM05D000216 ORTHO05D000634 4.0e-22 108.2 63 84.1
GSVIVG01017094001 Vitis vinifera HOM05D000216 ORTHO05D000634 5.2e-22 107.8 63 82.5
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 6.8e-22 107.5 63 84.1
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 8.9e-22 107.1 63 82.5
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 8.9e-22 107.1 63 82.5
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 2.0e-21 105.9 63 82.5
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 2.6e-21 105.5 55 89.1
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-21 105.5 55 89.1
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-21 105.5 55 89.1
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-21 105.5 55 89.1
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-21 105.5 55 89.1
Hund28153 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-21 105.5 55 89.1
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-21 105.5 55 89.1
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-21 105.5 55 89.1
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-21 105.5 55 89.1
Hund28617 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-21 105.5 55 89.1
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-21 105.5 55 89.1
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-21 105.5 55 89.1
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-21 105.5 55 89.1
HanXRQChr07g0188331 Helianthus annuus HOM05D000216 ORTHO05D000634 1.3e-20 103.2 52 90.4
AUR62024082 Chenopodium quinoa HOM05D000216 ORTHO05D000634 1.1e-19 100.1 63 81.0
Hund25861 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-19 100.1 55 85.5
AUR62030122 Chenopodium quinoa HOM05D000216 ORTHO05D000634 1.9e-19 99.4 62 80.6
Lalb_Chr06g0173021 Lupinus albus HOM05D000216 ORTHO05D000634 2.4e-19 99.0 63 79.4
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.6e-18 96.3 47 91.5
ClCG01G011260 Citrullus lanatus HOM05D000216 ORTHO05D000634 2.1e-18 95.9 52 82.7
arahy.Tifrunner.gnm1.ann1.ZJYB0J Arachis hypogaea HOM05D000216 ORTHO05D000473 3.5e-18 95.1 45 95.6
BolC5t28870H Brassica oleracea HOM05D000216 ORTHO05D000634 4.6e-18 94.7 56 80.4
CAN.G386.8 Capsicum annuum HOM05D000216 ORTHO05D001131 1.0e-17 93.6 45 93.3
Eucgr.J01352 Eucalyptus grandis HOM05D000216 ORTHO05D000634 1.3e-17 93.2 55 80.0
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 1.3e-17 93.2 47 89.4
HanXRQChr14g0436631 Helianthus annuus HOM05D000216 ORTHO05D000634 6.6e-17 90.9 45 91.1
arahy.Tifrunner.gnm1.ann1.09TZAG Arachis hypogaea HOM05D000216 ORTHO05D000634 2.5e-16 89.0 45 88.9
SMO086G0013 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 5.6e-16 87.8 55 72.7
Hund12597 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.7e-15 84.7 55 70.9
Ah.02g118920 Amaranthus hybridus HOM05D005794 ORTHO05D006814 2.4e-14 82.4 60 68.3
Gorai.001G101300 Gossypium raimondii HOM05D000216 ORTHO05D000634 2.4e-14 82.4 41 90.2
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 4.0e-14 81.6 55 74.5
CAN.G1738.9 Capsicum annuum HOM05D000216 ORTHO05D000634 9.0e-14 80.5 41 85.4
SEGI_37297 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 2.6e-13 79.0 47 74.5
Sc10g0006900 Simmondsia chinensis HOM05D000216 ORTHO05D000634 4.9e-12 74.7 41 80.5
arahy.Tifrunner.gnm1.ann1.4QEF9J Arachis hypogaea HOM05D000216 ORTHO05D000634 7.1e-11 70.9 39 76.9
Aa31csc39G120 Aethionema arabicum HOM05D000216 ORTHO05D000634 1.6e-10 69.7 34 85.3
Ah.10g028700 Amaranthus hybridus HOM05D029963 ORTHO05D026499 3.5e-10 68.6 35 91.4
HanXRQChr00c0988g0578121 Helianthus annuus HOM05D000216 ORTHO05D000634 6.0e-10 67.8 39 76.9
Gohir.D13G143950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.9e-09 65.1 35 88.6
Gohir.A09G019050 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.5e-08 63.2 32 84.4
HanXRQChr03g0073121 Helianthus annuus HOM05D000216 ORTHO05D000634 7.3e-08 60.8 30 96.7
FAN27G0873 Fragaria x ananassa HOM05D000743 ORTHO05D000580 1.6e-07 59.7 34 85.3
Oeu045561.1 Olea europaea HOM05D000216 ORTHO05D000634 2.1e-07 59.3 32 78.1
Nitab4.5_0002868g0030 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.4e-06 55.8 55 54.5


User provided reference genes

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