Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G15425 Trifolium pratense HOM05D004522 ORTHO05D005887 2.4e-60 235.3 119 100.0
TPR.G12110 Trifolium pratense HOM05D004522 ORTHO05D005887 2.4e-52 208.8 111 93.7
Ca_01520_v3 Cicer arietinum L. HOM05D004522 ORTHO05D005887 4.9e-50 201.1 114 87.7
Medtr1g009570 Medicago truncatula HOM05D004522 ORTHO05D005887 1.3e-47 193.0 111 86.5
Psat6g033360 Pisum sativum HOM05D004522 ORTHO05D005887 6.2e-45 184.1 119 79.0
Psat6g033400 Pisum sativum HOM05D004522 ORTHO05D005887 6.2e-45 184.1 110 84.5
Medtr1g009315 Medicago truncatula HOM05D004522 ORTHO05D005887 1.8e-44 182.6 96 90.6
Medtr0245s0010 Medicago truncatula HOM05D004522 ORTHO05D005887 1.5e-43 179.5 96 89.6
Glyma.17G196500 Glycine max HOM05D004522 ORTHO05D005887 1.6e-40 169.5 121 72.7
Lj5g0011494 Lotus japonicus HOM05D004522 ORTHO05D005887 2.1e-40 169.1 119 73.9
Glyma.14G137100 Glycine max HOM05D004522 ORTHO05D005887 8.7e-39 163.7 119 71.4
Phvul.002G181900 Phaseolus vulgaris HOM05D004522 ORTHO05D005887 8.7e-39 163.7 116 72.4
VMungo0251G2915 Vigna mungo HOM05D004522 ORTHO05D005887 1.5e-38 162.9 116 72.4
Lalb_Chr22g0361201 Lupinus albus HOM05D004522 ORTHO05D005887 4.3e-38 161.4 122 68.9
arahy.Tifrunner.gnm1.ann1.696W46 Arachis hypogaea HOM05D004522 ORTHO05D005887 7.6e-35 150.6 111 68.5
CARHR239110 Cardamine hirsuta HOM05D004522 ORTHO05D005887 2.5e-33 145.6 111 63.1
Carub.0007s0933 Capsella rubella HOM05D004522 ORTHO05D005887 3.2e-33 145.2 123 62.6
arahy.Tifrunner.gnm1.ann1.IIX4FM Arachis hypogaea HOM05D004522 ORTHO05D005887 9.3e-33 143.7 83 80.7
QL12p025652 Quercus lobata HOM05D004522 ORTHO05D005887 9.3e-33 143.7 131 61.1
Atru.chr7.2700 Acer truncatum HOM05D004522 ORTHO05D005887 1.2e-32 143.3 126 60.3
EL10Ac2g03676 Beta vulgaris HOM05D004522 ORTHO05D005887 1.6e-32 142.9 78 84.6
AUR62020658 Chenopodium quinoa HOM05D004522 ORTHO05D005887 1.6e-32 142.9 78 84.6
AUR62028071 Chenopodium quinoa HOM05D004522 ORTHO05D005887 1.6e-32 142.9 78 84.6
AUR62044451 Chenopodium quinoa HOM05D004522 ORTHO05D005887 1.6e-32 142.9 78 84.6
Actinidia21721 Actinidia chinensis HOM05D004522 ORTHO05D005887 2.1e-32 142.5 86 79.1
BcaNung01535 Brassica carinata HOM05D004522 ORTHO05D005887 2.1e-32 142.5 121 59.5
C07p58490 Brassica napus HOM05D004522 ORTHO05D005887 2.1e-32 142.5 121 59.5
BolC7t46304H Brassica oleracea HOM05D004522 ORTHO05D005887 2.1e-32 142.5 121 59.5
CANSAT25G3238 Cannabis sativa HOM05D004522 ORTHO05D005887 2.1e-32 142.5 103 68.9
Ah.14g088390 Amaranthus hybridus HOM05D004522 ORTHO05D005887 2.7e-32 142.1 78 83.3
Thhalv10024242m.g Eutrema salsugineum HOM05D004522 ORTHO05D005887 2.7e-32 142.1 126 61.1
FvH4_2g36580 Fragaria vesca HOM05D004522 ORTHO05D005887 2.7e-32 142.1 109 66.1
HanXRQChr16g0521121 Helianthus annuus HOM05D004522 ORTHO05D005887 2.7e-32 142.1 78 85.9
MD08G1125900 Malus domestica HOM05D004522 ORTHO05D005887 2.7e-32 142.1 138 56.5
AL7G20870 Arabidopsis lyrata HOM05D004522 ORTHO05D005887 3.5e-32 141.7 123 61.8
AT4G31210 Arabidopsis thaliana HOM05D004522 ORTHO05D005887 3.5e-32 141.7 123 61.8
BraA03t15100Z Brassica rapa HOM05D004522 ORTHO05D005887 3.5e-32 141.7 121 59.5
Nitab4.5_0011308g0020 Nicotiana tabacum HOM05D004522 ORTHO05D005887 3.5e-32 141.7 112 67.9
Sp7g29090 Schrenkiella parvula HOM05D004522 ORTHO05D005887 3.5e-32 141.7 106 67.9
Sed0008341 Sechium edule HOM05D004522 ORTHO05D005887 3.5e-32 141.7 120 59.2
A01p07030 Brassica napus HOM05D004522 ORTHO05D005887 4.6e-32 141.4 83 78.3
A03p60590 Brassica napus HOM05D004522 ORTHO05D005887 4.6e-32 141.4 121 59.5
BolC1t00764H Brassica oleracea HOM05D004522 ORTHO05D005887 4.6e-32 141.4 83 78.3
BraA01t00655Z Brassica rapa HOM05D004522 ORTHO05D005887 4.6e-32 141.4 83 78.3
RcHm_v2.0_Chr6g0305241 Rosa chinensis HOM05D004522 ORTHO05D005887 4.6e-32 141.4 109 66.1
Prupe.1G457500 Prunus persica HOM05D004522 ORTHO05D005887 6.0e-32 141.0 130 60.0
Gohir.A06G108300 Gossypium hirsutum HOM05D004522 ORTHO05D005887 7.9e-32 140.6 132 62.1
TWI63G0055 Tripterygium wilfordii HOM05D004522 ORTHO05D005887 7.9e-32 140.6 137 59.9
BcaC09g51903 Brassica carinata HOM05D004522 ORTHO05D005887 1.0e-31 140.2 130 57.7
C01p07770 Brassica napus HOM05D004522 ORTHO05D005887 1.0e-31 140.2 130 57.7
Ciclev10007345m.g Citrus clementina HOM05D004522 ORTHO05D005887 1.0e-31 140.2 119 63.0
Gohir.D06G110400 Gossypium hirsutum HOM05D004522 ORTHO05D005887 1.0e-31 140.2 120 66.7
Gorai.010G125500 Gossypium raimondii HOM05D004522 ORTHO05D005887 1.0e-31 140.2 120 66.7
Sc10g0004210 Simmondsia chinensis HOM05D004522 ORTHO05D005887 1.0e-31 140.2 105 70.5
Eucgr.C02139 Eucalyptus grandis HOM05D004522 ORTHO05D005887 1.3e-31 139.8 129 58.9
Nitab4.5_0000844g0320 Nicotiana tabacum HOM05D004522 ORTHO05D005887 1.3e-31 139.8 112 64.3
Sed0013871 Sechium edule HOM05D004522 ORTHO05D005887 1.3e-31 139.8 125 59.2
Lsat_1_v5_gn_4_39420 Lactuca sativa HOM05D004522 ORTHO05D005887 1.8e-31 139.4 100 68.0
Thecc.09G000400 Theobroma cacao HOM05D004522 ORTHO05D005887 1.8e-31 139.4 78 85.9
ClCG05G026380 Citrullus lanatus HOM05D004522 ORTHO05D005887 2.3e-31 139.0 119 63.9
COL.COLO4_18648 Corchorus olitorius HOM05D004522 ORTHO05D005887 2.3e-31 139.0 135 56.3
Haze_21777 Corylus avellana HOM05D004522 ORTHO05D005887 2.3e-31 139.0 78 84.6
vmacro18846 Vaccinium macrocarpon HOM05D004522 ORTHO05D005887 2.3e-31 139.0 136 55.9
Dinv38803 Davidia involucrata HOM05D004522 ORTHO05D005887 3.0e-31 138.7 109 64.2
FAN20G0828 Fragaria x ananassa HOM05D004522 ORTHO05D005887 3.0e-31 138.7 115 62.6
FAN27G1482 Fragaria x ananassa HOM05D004522 ORTHO05D005887 3.0e-31 138.7 86 77.9
CSS0030659 Camellia sinensis var. sinensis HOM05D004522 ORTHO05D005887 3.9e-31 138.3 118 61.9
Cfa013296 Carpinus fangiana HOM05D004522 ORTHO05D005887 3.9e-31 138.3 134 61.2
SGA_v2.0_scaffold62G21366 Striga asiatica HOM05D004522 ORTHO05D005887 3.9e-31 138.3 86 77.9
Aa31LG2G19120 Aethionema arabicum HOM05D004522 ORTHO05D005887 5.1e-31 137.9 130 59.2
Hund03258 Selenicereus undatus HOM05D004522 ORTHO05D005887 5.1e-31 137.9 127 59.8
Aa31LG2G19110 Aethionema arabicum HOM05D004522 ORTHO05D005887 6.7e-31 137.5 129 59.7
Peaxi162Scf00036g01311 Petunia axillaris HOM05D004522 ORTHO05D005887 6.7e-31 137.5 118 62.7
TAR629G0385 Trochodendron aralioides HOM05D004522 ORTHO05D005887 6.7e-31 137.5 103 67.0
Actinidia32106 Actinidia chinensis HOM05D004522 ORTHO05D005887 8.7e-31 137.1 119 61.3
Oeu005158.2 Olea europaea HOM05D004522 ORTHO05D005887 8.7e-31 137.1 119 60.5
CAN.G809.41 Capsicum annuum HOM05D004522 ORTHO05D005887 1.1e-30 136.7 118 61.9
DCAR_006332 Daucus carota HOM05D004522 ORTHO05D005887 1.1e-30 136.7 113 62.8
Solyc02g081910.2 Solanum lycopersicum HOM05D004522 ORTHO05D005887 1.1e-30 136.7 118 62.7
Sopen02g026540 Solanum pennellii HOM05D004522 ORTHO05D005887 1.1e-30 136.7 118 62.7
THA.LOC104819919 Tarenaya hassleriana HOM05D004522 ORTHO05D005887 1.1e-30 136.7 118 59.3
Manes.03G000450 Manihot esculenta HOM05D004522 ORTHO05D005887 1.5e-30 136.3 136 57.4
Zm00001eb280820 Zea mays HOM05D004522 ORTHO05D005887 1.5e-30 136.3 76 84.2
Lj8C583T4 Lonicera japonica HOM05D004522 ORTHO05D005887 1.9e-30 136.0 78 80.8
MD15G1105700 Malus domestica HOM05D004522 ORTHO05D005887 1.9e-30 136.0 105 65.7
Os06g0281400 Oryza sativa ssp. japonica HOM05D004522 ORTHO05D005887 2.5e-30 135.6 108 64.8
Cpa.g.sc246.5 Carica papaya HOM05D004522 ORTHO05D005887 3.3e-30 135.2 78 80.8
Dinv37488 Davidia involucrata HOM05D004522 ORTHO05D005887 3.3e-30 135.2 119 63.0
ECA234G1339 Erigeron canadensis HOM05D004522 ORTHO05D005887 3.3e-30 135.2 137 52.6
Aqoxy3G03771 Aquilegia oxysepala HOM05D004522 ORTHO05D005887 4.3e-30 134.8 98 68.4
SalBow1G6309 Salvia bowleyana HOM05D004522 ORTHO05D005887 4.3e-30 134.8 128 57.0
Migut.E00600 Erythranthe guttata HOM05D004522 ORTHO05D005887 5.7e-30 134.4 93 68.8
MBI16_g42310_MAGBIO Magnolia biondii HOM05D004522 ORTHO05D005887 5.7e-30 134.4 113 61.1
Rhsim08G0228200 Rhododendron simsii HOM05D004522 ORTHO05D005887 7.4e-30 134.0 119 58.8
Cc09_g04950 Coffea canephora HOM05D004522 ORTHO05D005887 9.6e-30 133.7 76 82.9
Hma1.2p1_0495F.1_g165690 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 9.6e-30 133.7 86 75.6
CANSAT54G0998 Cannabis sativa HOM05D004522 ORTHO05D005887 1.3e-29 133.3 101 66.3
Nn4g23566 Nelumbo nucifera HOM05D004522 ORTHO05D005887 1.3e-29 133.3 118 59.3
HPP92_015554 Vanilla planifolia HOM05D004522 ORTHO05D005887 1.3e-29 133.3 112 61.6
CiPaw.07G210600 Carya illinoinensis HOM05D004522 ORTHO05D005887 1.6e-29 132.9 110 62.7
Hma1.2p1_0534F.1_g173690 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 1.6e-29 132.9 103 66.0
Hma1.2p1_0534F.1_g173700 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 1.6e-29 132.9 103 66.0
Hma1.2p1_1265F.1_g271353 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 1.6e-29 132.9 103 66.0
Hma1.2p1_1265F.1_g271356 Hydrangea macrophylla HOM05D004522 ORTHO05D005887 1.6e-29 132.9 103 66.0
CsaV3_3G047220 Cucumis sativus L. HOM05D004522 ORTHO05D005887 2.1e-29 132.5 80 77.5
GSVIVG01035576001 Vitis vinifera HOM05D004522 ORTHO05D005887 2.1e-29 132.5 131 59.5
Potri.006G279700 Populus trichocarpa HOM05D004522 ORTHO05D005887 2.8e-29 132.1 78 80.8
MELO3C003609.2 Cucumis melo HOM05D004522 ORTHO05D005887 3.7e-29 131.7 114 60.5
SalBow1G4849 Salvia bowleyana HOM05D004522 ORTHO05D005887 3.7e-29 131.7 128 56.2
Migut.C00355 Erythranthe guttata HOM05D004522 ORTHO05D005887 8.2e-29 130.6 75 81.3
SHI21133 Sapria himalayana HOM05D004522 ORTHO05D005887 1.4e-28 129.8 117 58.1
Sabra06G0216700 Salix brachista HOM05D004522 ORTHO05D005887 5.3e-28 127.9 78 78.2
ATR0691G178 Amborella trichopoda HOM05D004522 ORTHO05D005887 6.9e-28 127.5 75 77.3
RhsimUnG0118700 Rhododendron simsii HOM05D004522 ORTHO05D005887 9.0e-28 127.1 86 74.4
PSO063G2748 Papaver somniferum HOM05D004522 ORTHO05D005887 1.3e-26 123.2 93 66.7
PSO782G1701 Papaver somniferum HOM05D004522 ORTHO05D005887 1.3e-26 123.2 93 66.7
unitig_60.g25825 Utricularia gibba HOM05D004522 ORTHO05D005887 1.1e-25 120.2 119 55.5
vmacro20064 Vaccinium macrocarpon HOM05D004522 ORTHO05D005887 1.4e-25 119.8 119 55.5
PSO478G3803 Papaver somniferum HOM05D004522 ORTHO05D005887 2.7e-24 115.5 118 53.4
PGSC0003DMG400012781 Solanum tuberosum HOM05D004522 ORTHO05D005887 1.5e-22 109.8 69 73.9
Pp3c24_9990 Physcomitrium patens HOM05D004522 ORTHO05D005887 1.2e-19 100.1 69 68.1
Pp3c23_11430 Physcomitrium patens HOM05D004522 ORTHO05D005887 5.9e-19 97.8 69 68.1
Mapoly0025s0095 Marchantia polymorpha HOM05D004522 ORTHO05D005887 2.9e-18 95.5 77 61.0
SMO304G0055 Selaginella moellendorffii HOM05D004522 ORTHO05D005887 8.5e-18 94.0 70 62.9
AagrBONN_evm.TU.Sc2ySwM_228.692 Anthoceros agrestis HOM05D004522 ORTHO05D005887 2.5e-17 92.4 105 51.4
Medtr2g066840 Medicago truncatula HOM05D004522 ORTHO05D005887 2.3e-15 85.9 91 47.3
AUR62043895 Chenopodium quinoa HOM05D004522 ORTHO05D005887 4.8e-13 78.2 78 53.8
MCO16G139 Micromonas commoda HOM05D004522 ORTHO05D005887 4.5e-11 71.6 70 48.6
CBR_g22953 Chara braunii HOM05D004522 ORTHO05D005887 1.4e-09 66.6 116 37.9
Cre10.g442850 Chlamydomonas reinhardtii HOM05D004522 ORTHO05D005887 2.1e-08 62.8 42 71.4


User provided reference genes

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