Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0495 Trochodendron aralioides HOM05D003939 ORTHO05D005979 1.3e-45 186.0 91 100.0
TAR376G0271 Trochodendron aralioides HOM05D003939 ORTHO05D009412 1.5e-27 125.9 63 93.7
TAR376G0356 Trochodendron aralioides HOM05D003939 ORTHO05D009412 4.5e-27 124.4 63 92.1
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 3.8e-18 94.7 59 78.0
Atru.chr8.419 Acer truncatum HOM05D003939 ORTHO05D005979 5.0e-18 94.4 65 75.4
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 5.0e-18 94.4 59 78.0
PGSC0003DMG400012376 Solanum tuberosum HOM05D003939 ORTHO05D005979 5.0e-18 94.4 68 73.5
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 6.5e-18 94.0 59 76.3
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 6.5e-18 94.0 65 72.3
Lju41A4T71 Lonicera japonica HOM05D003939 ORTHO05D005979 6.5e-18 94.0 59 78.0
Peaxi162Scf00451g00326 Petunia axillaris HOM05D003939 ORTHO05D005979 6.5e-18 94.0 68 70.6
Solyc03g059420.4 Solanum lycopersicum HOM05D003939 ORTHO05D005979 6.5e-18 94.0 68 73.5
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 6.5e-18 94.0 68 73.5
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 8.5e-18 93.6 59 76.3
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 8.5e-18 93.6 59 76.3
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 1.1e-17 93.2 68 70.6
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 1.4e-17 92.8 59 72.9
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 1.4e-17 92.8 59 74.6
Nitab4.5_0001637g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 1.4e-17 92.8 68 70.6
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 1.9e-17 92.4 59 76.3
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 1.9e-17 92.4 59 76.3
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 1.9e-17 92.4 68 67.6
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 2.5e-17 92.0 68 70.6
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 3.2e-17 91.7 59 74.6
Haze_14442 Corylus avellana HOM05D003939 ORTHO05D005979 3.2e-17 91.7 47 91.5
Nitab4.5_0002960g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 3.2e-17 91.7 68 69.1
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 3.2e-17 91.7 65 72.3
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 4.2e-17 91.3 68 67.6
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 4.2e-17 91.3 59 78.0
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 4.2e-17 91.3 59 76.3
Actinidia01988 Actinidia chinensis HOM05D003939 ORTHO05D005979 5.5e-17 90.9 59 74.6
CDE04G2810 Ceratophyllum demersum HOM05D003939 ORTHO05D005979 5.5e-17 90.9 59 72.9
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 7.2e-17 90.5 59 76.3
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 7.2e-17 90.5 59 76.3
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 7.2e-17 90.5 59 76.3
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 9.3e-17 90.1 59 74.6
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 9.3e-17 90.1 59 72.9
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 1.2e-16 89.7 68 72.1
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 1.2e-16 89.7 59 72.9
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 1.2e-16 89.7 68 67.6
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 1.6e-16 89.4 59 74.6
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 1.6e-16 89.4 59 71.2
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 1.6e-16 89.4 59 74.6
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 1.6e-16 89.4 59 74.6
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 2.1e-16 89.0 59 74.6
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 2.1e-16 89.0 59 74.6
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 2.1e-16 89.0 47 89.4
Ca_04301_v3 Cicer arietinum L. HOM05D003939 ORTHO05D005979 2.1e-16 89.0 59 72.9
ClCG07G007360 Citrullus lanatus HOM05D003939 ORTHO05D005979 2.1e-16 89.0 68 67.6
CsaV3_4G008740 Cucumis sativus L. HOM05D003939 ORTHO05D005979 2.1e-16 89.0 59 72.9
Glyma.19G029000 Glycine max HOM05D003939 ORTHO05D005979 2.1e-16 89.0 59 74.6
MBI19_g03793_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D005979 2.1e-16 89.0 52 82.7
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 2.1e-16 89.0 59 74.6
Sc10g0004620 Simmondsia chinensis HOM05D003939 ORTHO05D005979 2.1e-16 89.0 59 72.9
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 2.7e-16 88.6 59 72.9
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 2.7e-16 88.6 59 72.9
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 2.7e-16 88.6 59 72.9
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 2.7e-16 88.6 68 66.2
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 2.7e-16 88.6 59 72.9
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 2.7e-16 88.6 59 72.9
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 3.6e-16 88.2 59 72.9
Psat0s5863g0040 Pisum sativum HOM05D003939 ORTHO05D005979 3.6e-16 88.2 59 71.2
Psat0s5863g0080 Pisum sativum HOM05D003939 ORTHO05D005979 3.6e-16 88.2 59 71.2
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 3.6e-16 88.2 88 53.4
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 3.6e-16 88.2 59 72.9
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 4.6e-16 87.8 59 72.9
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 4.6e-16 87.8 59 72.9
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 4.6e-16 87.8 59 72.9
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 6.1e-16 87.4 59 72.9
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 6.1e-16 87.4 59 72.9
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 6.1e-16 87.4 59 74.6
ATR0064G076 Amborella trichopoda HOM05D003939 ORTHO05D005979 7.9e-16 87.0 59 71.2
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 7.9e-16 87.0 59 71.2
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 7.9e-16 87.0 59 72.9
EL10Ac2g03123 Beta vulgaris HOM05D003939 ORTHO05D005979 1.0e-15 86.7 59 72.9
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 1.4e-15 86.3 59 72.9
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 1.4e-15 86.3 59 72.9
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.4e-15 86.3 59 72.9
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.4e-15 86.3 59 72.9
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.4e-15 86.3 59 72.9
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 1.4e-15 86.3 59 72.9
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 1.4e-15 86.3 59 72.9
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 1.4e-15 86.3 59 72.9
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 1.8e-15 85.9 59 72.9
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 1.8e-15 85.9 59 72.9
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 1.8e-15 85.9 59 72.9
Os07g0110400 Oryza sativa ssp. japonica HOM05D003939 ORTHO05D005979 1.8e-15 85.9 68 66.2
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 2.3e-15 85.5 59 72.9
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 2.3e-15 85.5 59 72.9
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 2.3e-15 85.5 68 69.1
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 2.3e-15 85.5 59 72.9
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 2.3e-15 85.5 59 72.9
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 2.3e-15 85.5 59 72.9
TAR371G0557 Trochodendron aralioides HOM05D003939 ORTHO05D005979 2.3e-15 85.5 68 66.2
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 3.0e-15 85.1 53 75.5
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 3.0e-15 85.1 68 63.2
Zm00001eb118180 Zea mays HOM05D003939 ORTHO05D005979 3.0e-15 85.1 68 66.2
Zm00001eb298600 Zea mays HOM05D003939 ORTHO05D005979 3.0e-15 85.1 68 66.2
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 3.9e-15 84.7 72 62.5
Gohir.D09G009300 Gossypium hirsutum HOM05D003939 ORTHO05D005979 3.9e-15 84.7 59 71.2
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 3.9e-15 84.7 59 71.2
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 3.9e-15 84.7 59 71.2
HPP92_012299 Vanilla planifolia HOM05D003939 ORTHO05D005979 3.9e-15 84.7 59 64.4
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 7.4e-14 80.5 59 69.5
SEGI_06328 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 8.2e-13 77.0 53 67.9
CSS0005126 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 4.1e-12 74.7 43 79.1
CSS0039149 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 4.1e-12 74.7 43 79.1
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 5.3e-12 74.3 59 59.3
Pp3c15_14600 Physcomitrium patens HOM05D003939 ORTHO05D005979 2.6e-11 72.0 59 59.3
CBR_g19320 Chara braunii HOM05D003939 ORTHO05D005979 1.0e-10 70.1 53 62.3
SEGI_32509 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 1.0e-10 70.1 59 55.9
AagrBONN_evm.TU.Sc2ySwM_344.3096 Anthoceros agrestis HOM05D003939 ORTHO05D005979 2.2e-10 68.9 59 52.5
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 2.2e-10 68.9 65 55.4
MCO01G540 Micromonas commoda HOM05D003939 ORTHO05D005979 5.7e-06 54.3 69 40.6


User provided reference genes

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