Gene: Nitab4.5_0002960g0010
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0002960g0010
- Transcript Identifier Nitab4.5_0002960g0010.1
- Gene Type Coding gene
- Location Nitab4.5_0002960 : 23164-37916 : negative
Gene Family Information
- ID HOM05D003939
- #Genes/#Species 177/96
- Phylogenetic origin
- ID ORTHO05D005979
- #Genes/#Species 149/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Nitab4.5_0002960g0010.1
- SR1-identifier Nta12g18650.1
Descriptions
- Description Zinc finger, RING/FYVE/PHD-type, Zinc finger, FYVE/PHD-type, Zinc finger, RING-type, HEAT repeat associated with sister chromatid cohesion protein, Zinc finger, PHD-finger, Zinc finger, PHD-type, Armadillo-like helical, Zinc finger, PHD-type, conserved site, Sister chromatid cohesion C-terminal domain, Armadillo-type fold
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010468 | IEA | InterPro | regulation of gene expression | |
| GO:0061780 | IEA | InterPro | mitotic cohesin loading | |
| GO:0007062 | ISO | PLAZA Integrative Orthology | sister chromatid cohesion | AT5G15540 |
| GO:0034508 | ISO | PLAZA Integrative Orthology | centromere complex assembly | AT5G15540 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT5G15540 |
| GO:0051177 | ISO | PLAZA Integrative Orthology | meiotic sister chromatid cohesion | AT5G15540 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003682 | IEA | InterPro | chromatin binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G15540 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011989 | Armadillo-like helical |
| IPR024986 | Sister chromatid cohesion C-terminal domain |
| IPR033031 | Scc2/Nipped-B family |
| IPR026003 | HEAT repeat associated with sister chromatid cohesion protein |
| IPR016024 | Armadillo-type fold |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR001965 | Zinc finger, PHD-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Mapman id | Description |
|---|---|
| 13.3.4.2.1.1 | Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin loading.SCC2-SCC4 adherin complex.adherin (SCC2) |