Gene: Duzib187G1101
General Information
Structural Information
- Species Durio zibethinus
- Gene Identifier Duzib187G1101
- Transcript Identifier Duzib187G1101.01
- Gene Type Coding gene
- Location NW_019167860.1 : 12491248-12503270 : negative
Gene Family Information
- ID HOM05D003939
- #Genes/#Species 177/96
- Phylogenetic origin
- ID ORTHO05D005979
- #Genes/#Species 149/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name LOC111299657
- name XM_022894984.1
- pid XP_022750719.1
- id gene-LOC111299657
- uniprot A0A6P5ZDY8
Descriptions
- product sister chromatid cohesion protein SCC2-like, transcript variant X3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010468 | IEA | GOA Database | regulation of gene expression | |
| GO:0010468 | IEA | InterPro | regulation of gene expression | |
| GO:0061780 | IEA | GOA Database | mitotic cohesin loading | |
| GO:0061780 | IEA | InterPro | mitotic cohesin loading | |
| GO:0007049 | IEA | GOA Database | cell cycle | |
| GO:0007062 | ISO | PLAZA Integrative Orthology | sister chromatid cohesion | AT5G15540 |
| GO:0034508 | ISO | PLAZA Integrative Orthology | centromere complex assembly | AT5G15540 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT5G15540 |
| GO:0051177 | ISO | PLAZA Integrative Orthology | meiotic sister chromatid cohesion | AT5G15540 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003682 | IEA | GOA Database | chromatin binding | |
| GO:0003682 | IEA | InterPro | chromatin binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G15540 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR033031 | Scc2/Nipped-B family |
| IPR016024 | Armadillo-type fold |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR026003 | HEAT repeat associated with sister chromatid cohesion protein |
| IPR024986 | Sister chromatid cohesion C-terminal domain |
| IPR001965 | Zinc finger, PHD-type |
| Mapman id | Description |
|---|---|
| 13.3.4.2.1.1 | Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin loading.SCC2-SCC4 adherin complex.adherin (SCC2) |