Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 0.0e+00 1897.9 945 100.0
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 0.0e+00 1325.1 947 71.8
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 0.0e+00 1234.2 896 71.1
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 0.0e+00 1234.2 909 69.7
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 0.0e+00 1213.0 890 70.4
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 0.0e+00 1164.4 929 67.2
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 0.0e+00 1163.7 937 67.2
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 0.0e+00 1158.7 936 66.9
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 0.0e+00 1148.7 920 67.4
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 0.0e+00 1142.1 969 64.7
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 0.0e+00 1139.8 871 69.0
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 0.0e+00 1134.8 871 68.5
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 0.0e+00 1131.3 887 68.3
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 0.0e+00 1130.9 855 68.8
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 0.0e+00 1127.1 946 65.2
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 0.0e+00 1126.7 933 65.4
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 0.0e+00 1119.4 946 64.7
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 0.0e+00 1117.1 938 64.1
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 0.0e+00 1114.0 958 63.6
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 0.0e+00 1108.2 914 64.6
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 0.0e+00 1088.6 887 64.0
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 0.0e+00 1088.2 774 72.5
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 0.0e+00 1084.7 812 71.9
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 0.0e+00 1084.7 924 63.7
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 0.0e+00 1083.9 924 63.7
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 0.0e+00 1076.6 922 63.1
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 0.0e+00 1075.8 915 64.5
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 1.3e-311 1073.2 884 66.1
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 3.2e-311 1071.6 924 62.7
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 1.9e-309 1065.8 870 65.2
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 1.0e-307 1060.1 913 63.4
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 1.9e-306 1055.8 879 63.0
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 1.6e-305 1052.7 893 63.4
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 1.8e-304 1049.3 903 61.8
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 5.2e-304 1047.7 867 67.0
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 8.9e-304 1047.0 876 64.8
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 1.2e-303 1046.6 890 63.3
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 8.4e-302 1040.4 894 62.1
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 4.1e-301 1038.1 896 62.6
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 2.1e-300 1035.8 893 61.8
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 7.6e-295 1017.3 927 60.7
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 3.9e-291 1005.0 818 67.0
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 3.3e-290 1001.9 894 60.9
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 1.6e-289 999.6 894 59.2
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 1.8e-288 996.1 943 58.1
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 4.2e-285 984.9 924 58.2
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 1.8e-280 969.5 926 57.3
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 5.3e-280 968.0 897 60.9
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 7.6e-279 964.1 821 63.7
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 6.4e-278 961.1 914 57.7
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 2.4e-277 959.1 915 57.0
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 3.2e-277 958.7 910 57.4
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 7.9e-276 954.1 914 56.8
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 7.4e-274 947.6 915 56.8
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 2.4e-272 942.6 901 57.7
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 6.9e-272 941.0 916 56.9
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 3.4e-271 938.7 921 55.7
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 1.0e-270 937.2 919 57.2
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 1.7e-270 936.4 922 55.7
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 2.2e-270 936.0 923 55.8
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 2.2e-270 936.0 924 55.6
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 2.7e-268 929.1 925 55.6
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 1.0e-267 927.2 932 55.0
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 1.6e-265 919.8 943 55.4
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 7.9e-260 901.0 929 56.2
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 1.9e-253 879.8 890 57.0
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 1.8e-251 873.2 854 58.1
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 1.1e-250 870.5 702 65.0
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 4.1e-248 862.1 901 56.4
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 7.0e-248 861.3 870 57.0
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 5.0e-246 855.1 798 58.1
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 1.1e-245 854.0 709 66.7
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 1.4e-245 853.6 696 63.5
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 1.0e-243 847.4 848 58.3
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 1.8e-243 846.7 806 58.1
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 4.4e-242 842.0 885 55.4
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 7.0e-240 834.7 927 51.7
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 5.5e-237 825.1 715 64.9
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 5.7e-234 815.1 883 53.8
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 1.4e-232 810.4 813 57.8
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 2.7e-231 806.2 828 55.6
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 8.5e-230 801.2 665 66.6
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 8.5e-230 801.2 909 52.8
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 1.5e-229 800.4 686 65.9
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 3.7e-225 785.8 910 52.4
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 2.0e-223 780.0 860 53.7
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 1.9e-221 773.5 856 54.3
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 3.3e-221 772.7 632 66.5
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 9.5e-221 771.2 634 66.1
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 5.4e-216 755.4 910 49.3
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 1.6e-215 753.8 735 58.5
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 2.7e-215 753.1 926 51.7
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 1.9e-213 746.9 809 55.0
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 2.8e-212 743.0 865 52.1
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 8.9e-211 738.0 508 74.6
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 2.8e-204 716.5 953 48.7
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 6.6e-198 695.3 696 57.9
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 1.3e-193 681.0 937 46.3
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 3.7e-193 679.5 869 49.1
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 7.3e-181 638.6 603 60.4
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 4.7e-180 636.0 1003 43.4
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 6.2e-172 609.0 653 55.7
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 1.8e-171 607.4 750 50.0
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 3.8e-169 599.7 1027 41.3
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 4.3e-165 586.3 879 41.9
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 1.7e-145 521.2 871 37.8
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 2.3e-134 484.2 649 44.1
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 1.6e-127 461.5 575 46.6
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.2e-69 269.2 596 35.7
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 2.0e-69 268.5 208 66.8
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 7.6e-69 266.5 225 67.6
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 1.0e-49 203.0 347 34.3
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 2.3e-49 201.8 197 62.4
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 7.9e-42 176.8 319 34.5
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 1.7e-36 159.1 552 28.4
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 7.4e-24 117.1 123 50.4
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 6.5e-20 104.0 74 70.3
CSS0035540 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 7.2e-19 100.5 88 55.7
CBR_g28910 Chara braunii HOM05D000019 ORTHO05D000048 5.7e-16 90.9 116 45.7
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.8e-14 85.9 70 67.1
FAN09G2267 Fragaria x ananassa HOM05D006371 ORTHO05D008309 1.2e-13 83.2 71 50.7
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 2.0e-13 82.4 291 27.8
MD17G1105500 Malus domestica HOM05D006371 ORTHO05D008309 9.4e-11 73.6 41 90.2
AUR62026201 Chenopodium quinoa HOM05D006371 ORTHO05D008309 4.0e-09 68.2 38 89.5
ATR0618G237 Amborella trichopoda HOM05D003809 ORTHO05D003935 5.2e-09 67.8 148 30.4
CDE01G0778 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 6.7e-09 67.4 126 37.3
Lj2A76T85 Lonicera japonica HOM05D003809 ORTHO05D003935 1.1e-06 60.1 101 29.7
Gohir.A09G164500 Gossypium hirsutum HOM05D003809 ORTHO05D003935 3.1e-06 58.5 114 28.9
Psat7g246040 Pisum sativum HOM05D003809 ORTHO05D003935 7.0e-06 57.4 146 25.3
Gorai.006G181700 Gossypium raimondii HOM05D003809 ORTHO05D003935 9.1e-06 57.0 114 28.9


User provided reference genes

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