Gene: LjContig00155g0006571

General Information

Structural Information

  • Species Lotus japonicus
  • Gene Identifier LjContig00155g0006571
  • Transcript Identifier LjContig00155g0006571.1
  • Gene Type Coding gene
  • Location Contig00155 : 1162824-1173544 : positive

Gene Family Information

  • ID HOM05D006371
  • #Genes/#Species 125/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id LjContig00155g0006571.Lj1.0v1
  • pacid 44931739

Descriptions

  • Description 3.1.26.12 - Ribonuclease E / RNase E
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:1901259
ISO
PLAZA Integrative Orthologychloroplast rRNA processing AT2G04270
GO:0010239
ISO
PLAZA Integrative Orthologychloroplast mRNA processing AT2G04270
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G04270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0004540
IEA
InterProribonuclease activity
GO:2001070
IEA
InterProstarch binding
GO:0030246
IEA
InterProcarbohydrate binding
GO:0004521
ISO
PLAZA Integrative Orthologyendoribonuclease activity AT2G04270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G04270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019307 RNA-binding protein AU-1/Ribonuclease E/G
IPR004659 Ribonuclease E/G
IPR002044 Carbohydrate binding module family 20
IPR013784 Carbohydrate-binding-like fold
IPR013783 Immunoglobulin-like fold
Mapman id Description
16.11.1.3 RNA processing.organelle machinery.ribonuclease activities.endoribonuclease (RNase E)