Gene: PGR031G1410

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR031G1410
  • Transcript Identifier PGR031G1410.02
  • Gene Type Coding gene
  • Location NC_045127.1 : 2747468-2753349 : positive

Gene Family Information

  • ID HOM05D006371
  • #Genes/#Species 125/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031372344.1
  • name LOC116187627
  • name XM_031516484.1
  • id gene-LOC116187627
  • uniprot A0A6P8BPT6

Descriptions

  • product ribonuclease E/G-like protein, chloroplastic, transcript variant X2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G04270
GO:0010239
ISO
PLAZA Integrative Orthologychloroplast mRNA processing AT2G04270
GO:1901259
ISO
PLAZA Integrative Orthologychloroplast rRNA processing AT2G04270
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0090501
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:2001070
IEA
GOA Databasestarch binding
GO:2001070
IEA
InterProstarch binding
GO:0004521
ISO
PLAZA Integrative Orthologyendoribonuclease activity AT2G04270
GO:0030246
IEA
GOA Databasecarbohydrate binding
GO:0030246
IEA
InterProcarbohydrate binding
GO:0004540
IEA
GOA Databaseribonuclease activity
GO:0004540
IEA
InterProribonuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G04270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013784 Carbohydrate-binding-like fold
IPR002044 Carbohydrate binding module family 20
IPR004659 Ribonuclease E/G
IPR013783 Immunoglobulin-like fold
IPR019307 RNA-binding protein AU-1/Ribonuclease E/G
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
16.11.1.3 RNA processing.organelle machinery.ribonuclease activities.endoribonuclease (RNase E)