Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR383G0707 Trochodendron aralioides HOM05D005175 ORTHO05D006302 4.1e-72 274.6 138 100.0
TAR636G0460 Trochodendron aralioides HOM05D005175 ORTHO05D006302 2.2e-62 242.3 137 88.3
TAR626G1708 Trochodendron aralioides HOM05D005175 ORTHO05D006302 6.5e-62 240.7 137 88.3
Nn7g37002 Nelumbo nucifera HOM05D005175 ORTHO05D006302 5.3e-56 221.1 135 80.0
Dinv14260 Davidia involucrata HOM05D005175 ORTHO05D006302 9.1e-56 220.3 135 80.7
Hma1.2p1_0049F.1_g028680 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 1.7e-54 216.1 135 78.5
Ciclev10009310m.g Citrus clementina HOM05D005175 ORTHO05D006302 5.0e-54 214.5 135 77.8
Potri.018G043600 Populus trichocarpa HOM05D005175 ORTHO05D006302 1.5e-53 213.0 135 77.8
Rhsim02G0179100 Rhododendron simsii HOM05D005175 ORTHO05D006302 1.9e-53 212.6 135 77.0
Sabra18G0043700 Salix brachista HOM05D005175 ORTHO05D006302 1.9e-53 212.6 135 77.8
CSS0003070 Camellia sinensis var. sinensis HOM05D005175 ORTHO05D006302 7.2e-53 210.7 128 81.2
CANSAT11G2394 Cannabis sativa HOM05D005175 ORTHO05D006302 3.6e-52 208.4 130 77.7
CiPaw.11G052500 Carya illinoinensis HOM05D005175 ORTHO05D006302 4.7e-52 208.0 135 74.8
RcHm_v2.0_Chr6g0306141 Rosa chinensis HOM05D005175 ORTHO05D006302 6.1e-52 207.6 131 77.1
CSS0010535 Camellia sinensis var. sinensis HOM05D005175 ORTHO05D006302 1.0e-51 206.8 128 80.5
Cfa013314 Carpinus fangiana HOM05D005175 ORTHO05D006302 1.4e-51 206.5 135 75.6
FvH4_2g35660 Fragaria vesca HOM05D005175 ORTHO05D006302 1.8e-51 206.1 131 75.6
Eucgr.C02924 Eucalyptus grandis HOM05D005175 ORTHO05D006302 1.1e-50 203.4 135 74.1
GSVIVG01035631001 Vitis vinifera HOM05D005175 ORTHO05D006302 1.5e-50 203.0 135 73.3
Atru.chr7.2095 Acer truncatum HOM05D005175 ORTHO05D006302 4.4e-50 201.4 135 73.3
Atru.chr7.2109 Acer truncatum HOM05D005175 ORTHO05D006302 4.4e-50 201.4 135 73.3
Thecc.09G044300 Theobroma cacao HOM05D005175 ORTHO05D006302 7.4e-50 200.7 135 73.3
Dinv27896 Davidia involucrata HOM05D005175 ORTHO05D006302 1.3e-49 199.9 129 76.7
Gohir.D13G193000 Gossypium hirsutum HOM05D005175 ORTHO05D006302 2.2e-49 199.1 135 74.1
CAN.G1674.2 Capsicum annuum HOM05D005175 ORTHO05D006302 2.8e-49 198.7 134 71.6
QL12p029089 Quercus lobata HOM05D005175 ORTHO05D006302 2.8e-49 198.7 139 70.5
Manes.01G107300 Manihot esculenta HOM05D005175 ORTHO05D006302 3.7e-49 198.4 135 71.9
PGSC0003DMG400004310 Solanum tuberosum HOM05D005175 ORTHO05D006302 4.8e-49 198.0 131 71.8
Gohir.A13G186200 Gossypium hirsutum HOM05D005175 ORTHO05D006302 6.3e-49 197.6 135 74.1
Lj8C586G3 Lonicera japonica HOM05D005175 ORTHO05D006302 1.8e-48 196.1 130 76.2
Lalb_Chr08g0233831 Lupinus albus HOM05D005175 ORTHO05D006302 1.8e-48 196.1 135 67.4
Actinidia30274 Actinidia chinensis HOM05D005175 ORTHO05D006302 2.4e-48 195.7 135 75.6
AUR62009295 Chenopodium quinoa HOM05D005175 ORTHO05D006302 2.4e-48 195.7 132 74.2
Peaxi162Scf00227g00213 Petunia axillaris HOM05D005175 ORTHO05D006302 3.1e-48 195.3 134 73.1
Gorai.013G218900 Gossypium raimondii HOM05D005175 ORTHO05D006302 7.0e-48 194.1 136 72.8
CsaV3_2G030910 Cucumis sativus L. HOM05D005175 ORTHO05D006302 9.1e-48 193.7 135 68.1
Lj8C577G3 Lonicera japonica HOM05D005175 ORTHO05D006302 9.1e-48 193.7 130 75.4
EL10Ac2g04031 Beta vulgaris HOM05D005175 ORTHO05D006302 1.6e-47 193.0 132 72.7
Sed0006550 Sechium edule HOM05D005175 ORTHO05D006302 1.6e-47 193.0 135 68.9
ClCG08G012270 Citrullus lanatus HOM05D005175 ORTHO05D006302 2.0e-47 192.6 135 70.4
PSO566G0264 Papaver somniferum HOM05D005175 ORTHO05D006302 2.0e-47 192.6 131 69.5
Solyc08g066700.3 Solanum lycopersicum HOM05D005175 ORTHO05D006302 2.0e-47 192.6 125 72.8
arahy.Tifrunner.gnm1.ann1.WUZH4U Arachis hypogaea HOM05D005175 ORTHO05D006302 2.6e-47 192.2 136 66.2
Haze_21802 Corylus avellana HOM05D005175 ORTHO05D006302 3.5e-47 191.8 147 68.7
MELO3C011145.2 Cucumis melo HOM05D005175 ORTHO05D006302 4.5e-47 191.4 135 67.4
HanXRQChr01g0029811 Helianthus annuus HOM05D005175 ORTHO05D006302 5.9e-47 191.0 135 68.9
Lj2g0027256 Lotus japonicus HOM05D005175 ORTHO05D006302 5.9e-47 191.0 135 65.9
Prupe.1G449000 Prunus persica HOM05D005175 ORTHO05D006302 5.9e-47 191.0 135 71.1
PGR044G2490 Punica granatum HOM05D005175 ORTHO05D006302 7.7e-47 190.7 135 68.1
Glyma.18G230900 Glycine max HOM05D005175 ORTHO05D006302 1.7e-46 189.5 135 65.2
Aqoxy4G02391 Aquilegia oxysepala HOM05D005175 ORTHO05D006302 2.2e-46 189.1 125 76.8
TWI32G0813 Tripterygium wilfordii HOM05D005175 ORTHO05D006302 2.2e-46 189.1 131 70.2
Duzib150G1530 Durio zibethinus HOM05D005175 ORTHO05D006302 2.9e-46 188.7 126 75.4
Potri.006G239100 Populus trichocarpa HOM05D005175 ORTHO05D006302 2.9e-46 188.7 134 72.4
AUR62041709 Chenopodium quinoa HOM05D005175 ORTHO05D006302 3.8e-46 188.3 139 69.8
AUR62043392 Chenopodium quinoa HOM05D005175 ORTHO05D006302 3.8e-46 188.3 139 69.8
MD01G1039900 Malus domestica HOM05D005175 ORTHO05D006302 3.8e-46 188.3 131 72.5
Lsat_1_v5_gn_1_47181 Lactuca sativa HOM05D005175 ORTHO05D006302 6.5e-46 187.6 135 64.4
ATR0705G208 Amborella trichopoda HOM05D005175 ORTHO05D006302 1.5e-45 186.4 136 68.4
TPR.G26940 Trifolium pratense HOM05D005175 ORTHO05D006302 1.9e-45 186.0 135 62.2
MBI04_g27064_MAGBIO Magnolia biondii HOM05D005175 ORTHO05D006302 5.5e-45 184.5 128 75.8
PSO782G3154 Papaver somniferum HOM05D005175 ORTHO05D006302 5.5e-45 184.5 131 67.9
AT3G46210 Arabidopsis thaliana HOM05D005175 ORTHO05D006302 7.2e-45 184.1 125 70.4
ECA248G2598 Erigeron canadensis HOM05D005175 ORTHO05D006302 7.2e-45 184.1 127 67.7
MD15G1311800 Malus domestica HOM05D005175 ORTHO05D006302 7.2e-45 184.1 131 71.0
Medtr7g076910 Medicago truncatula HOM05D005175 ORTHO05D006302 9.4e-45 183.7 135 62.2
AL5G25000 Arabidopsis lyrata HOM05D005175 ORTHO05D006302 1.2e-44 183.3 125 70.4
FAN20G1449 Fragaria x ananassa HOM05D005175 ORTHO05D006302 1.6e-44 183.0 169 57.4
Psat3g124840 Pisum sativum HOM05D005175 ORTHO05D006302 1.6e-44 183.0 135 62.2
Carub.0005s1205 Capsella rubella HOM05D005175 ORTHO05D006302 2.7e-44 182.2 125 70.4
Cc08_g09460 Coffea canephora HOM05D005175 ORTHO05D006302 3.6e-44 181.8 125 70.4
Psat3g109920 Pisum sativum HOM05D005175 ORTHO05D006302 3.6e-44 181.8 135 62.2
Ah.15g099330 Amaranthus hybridus HOM05D005175 ORTHO05D006302 4.7e-44 181.4 132 69.7
Aqoxy7G01494 Aquilegia oxysepala HOM05D005175 ORTHO05D006302 4.7e-44 181.4 124 74.2
Ca_07899_v3 Cicer arietinum L. HOM05D005175 ORTHO05D006302 6.1e-44 181.0 135 61.5
COL.COLO4_20965 Corchorus olitorius HOM05D005175 ORTHO05D006302 8.0e-44 180.6 125 72.0
Glyma.09G261100 Glycine max HOM05D005175 ORTHO05D006302 1.0e-43 180.3 135 62.2
CARHR154650 Cardamine hirsuta HOM05D005175 ORTHO05D006302 1.4e-43 179.9 125 69.6
Thhalv10002814m.g Eutrema salsugineum HOM05D005175 ORTHO05D006302 3.0e-43 178.7 125 69.6
Sp5g15420 Schrenkiella parvula HOM05D005175 ORTHO05D006302 3.0e-43 178.7 125 69.6
Phvul.008G066200 Phaseolus vulgaris HOM05D005175 ORTHO05D006302 5.2e-43 177.9 124 67.7
BcaC01g01925 Brassica carinata HOM05D005175 ORTHO05D006302 1.5e-42 176.4 125 70.4
Hund19520 Selenicereus undatus HOM05D005175 ORTHO05D006302 1.5e-42 176.4 117 71.8
THA.LOC104814772 Tarenaya hassleriana HOM05D005175 ORTHO05D006302 1.5e-42 176.4 125 68.0
C03p70530 Brassica napus HOM05D005175 ORTHO05D006302 2.0e-42 176.0 125 69.6
A06p20990 Brassica napus HOM05D005175 ORTHO05D006302 2.6e-42 175.6 125 69.6
BolC3t19335H Brassica oleracea HOM05D005175 ORTHO05D006302 2.6e-42 175.6 125 69.6
CDE02G3559 Ceratophyllum demersum HOM05D005175 ORTHO05D006302 2.6e-42 175.6 124 69.4
Nitab4.5_0007810g0010 Nicotiana tabacum HOM05D005175 ORTHO05D006302 2.8e-41 172.2 127 67.7
Nitab4.5_0007838g0040 Nicotiana tabacum HOM05D005175 ORTHO05D006302 4.1e-40 168.3 127 66.9
Migut.A00211 Erythranthe guttata HOM05D005175 ORTHO05D006302 2.0e-39 166.0 135 61.5
BraA06t25187Z Brassica rapa HOM05D005175 ORTHO05D006302 3.5e-39 165.2 118 70.3
DCAR_004475 Daucus carota HOM05D005175 ORTHO05D006302 1.0e-38 163.7 134 59.7
MSTRG.11700 Avicennia marina HOM05D005175 ORTHO05D006302 4.2e-37 158.3 125 60.8
SEGI_05611 Sequoiadendron giganteum HOM05D005175 ORTHO05D006302 4.2e-37 158.3 125 58.4
vmacro11061 Vaccinium macrocarpon HOM05D005175 ORTHO05D006302 4.2e-37 158.3 98 80.6
Sc09g0009230 Simmondsia chinensis HOM05D005175 ORTHO05D006302 3.0e-35 152.1 98 77.6
Os03g0854200 Oryza sativa ssp. japonica HOM05D005175 ORTHO05D006302 5.7e-34 147.9 132 55.3
HPP92_018407 Vanilla planifolia HOM05D005175 ORTHO05D006302 7.5e-34 147.5 125 61.6
SalBow4G1104 Salvia bowleyana HOM05D005175 ORTHO05D006302 1.7e-33 146.4 128 53.1
Pp3c4_10290 Physcomitrium patens HOM05D005175 ORTHO05D006302 1.1e-32 143.7 125 56.0
Duzib168G0626 Durio zibethinus HOM05D005175 ORTHO05D006302 1.6e-31 139.8 135 57.0
Zm00001eb210560 Zea mays HOM05D005175 ORTHO05D006302 1.6e-31 139.8 131 51.9
AagrBONN_evm.TU.Sc2ySwM_228.4701 Anthoceros agrestis HOM05D005175 ORTHO05D006302 5.9e-31 137.9 125 57.6
Mapoly0050s0095 Marchantia polymorpha HOM05D005175 ORTHO05D006302 7.7e-31 137.5 130 56.2
Psat0s4355g0120 Pisum sativum HOM05D005175 ORTHO05D006302 2.8e-28 129.0 98 65.3
Gorai.010G107600 Gossypium raimondii HOM05D005175 ORTHO05D006302 6.1e-28 127.9 116 58.6
Aa31LG4G15310 Aethionema arabicum HOM05D005175 ORTHO05D006302 1.3e-25 120.2 99 59.6
Psat0s4355g0080 Pisum sativum HOM05D005175 ORTHO05D006302 6.3e-25 117.9 97 51.5
Glyma.17G169500 Glycine max HOM05D005175 ORTHO05D006302 1.1e-24 117.1 74 75.7
SGA_v2.0_scaffold75G25007 Striga asiatica HOM05D005175 ORTHO05D006302 4.6e-23 111.7 112 51.8
AagrBONN_evm.TU.Sc2ySwM_369.362 Anthoceros agrestis HOM05D005175 ORTHO05D006302 1.0e-19 100.5 102 54.9
Hma1.2p1_0049F.1_g028670 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 2.2e-17 92.8 54 85.2
Thhalv10002689m.g Eutrema salsugineum HOM05D005175 ORTHO05D006302 2.9e-17 92.4 57 78.9
CBR_g16978 Chara braunii HOM05D005175 ORTHO05D006302 4.1e-16 88.6 127 40.9
Gohir.D06G093150 Gossypium hirsutum HOM05D005175 ORTHO05D006302 4.1e-16 88.6 64 67.2
Hma1.2p1_0049F.1_g028690 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 9.2e-16 87.4 52 76.9
Hma1.2p1_0774F.1_g216360 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 3.5e-15 85.5 52 75.0
Gohir.A06G093501 Gossypium hirsutum HOM05D005175 ORTHO05D006302 1.9e-13 79.7 73 60.3
TPR.G28486 Trifolium pratense HOM05D005175 ORTHO05D006302 5.2e-11 71.6 75 44.0
SalBow4G2242 Salvia bowleyana HOM05D000552 ORTHO05D006302 1.5e-10 70.1 47 70.2
SalBow3G2467 Salvia bowleyana HOM05D000552 ORTHO05D006302 4.4e-10 68.6 47 68.1
Cre14.g624500 Chlamydomonas reinhardtii HOM05D005175 ORTHO05D006302 3.2e-08 62.4 137 32.1
Lj1g0020257 Lotus japonicus HOM05D005175 ORTHO05D006302 3.5e-07 58.9 31 93.5
vmacro11062 Vaccinium macrocarpon HOM05D005175 ORTHO05D006302 1.7e-06 56.6 37 64.9
GSVIVG01008243001 Vitis vinifera HOM05D005175 ORTHO05D006302 8.6e-06 54.3 37 67.6


User provided reference genes

Program Settings