Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g09050 Schrenkiella parvula HOM05D006570 ORTHO05D008193 1.2e-255 885.9 446 100.0
BcaC02g09469 Brassica carinata HOM05D006570 ORTHO05D008193 5.8e-229 797.3 450 90.2
BcaB03g16147 Brassica carinata HOM05D006570 ORTHO05D008193 2.2e-228 795.4 447 90.2
C04p43140 Brassica napus HOM05D006570 ORTHO05D008193 2.4e-227 792.0 452 89.4
A04p09180 Brassica napus HOM05D006570 ORTHO05D008193 9.3e-227 790.0 448 88.8
AL9U11910 Arabidopsis lyrata HOM05D006570 ORTHO05D008193 6.7e-225 783.9 451 88.2
Carub.0007s3008 Capsella rubella HOM05D006570 ORTHO05D008193 3.7e-223 778.1 452 88.7
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 1.8e-217 759.2 417 90.6
BolC4t25891H Brassica oleracea HOM05D006570 ORTHO05D008193 2.2e-212 742.3 440 86.8
AT4G12740 Arabidopsis thaliana HOM05D006570 ORTHO05D008193 4.9e-212 741.1 500 78.2
CARHR218120 Cardamine hirsuta HOM05D006570 ORTHO05D008193 8.4e-212 740.3 446 85.9
BraA04t16613Z Brassica rapa HOM05D006570 ORTHO05D008193 3.9e-209 731.5 445 83.6
Aa31sc565G50 Aethionema arabicum HOM05D006570 ORTHO05D008193 1.2e-197 693.3 453 77.7
THA.LOC104815379 Tarenaya hassleriana HOM05D006570 ORTHO05D008193 1.1e-187 660.2 442 76.5
Cpa.g.sc8.9 Carica papaya HOM05D006570 ORTHO05D008193 2.8e-159 565.8 468 63.7
Thecc.01G203700 Theobroma cacao HOM05D006570 ORTHO05D008193 5.4e-158 561.6 442 66.1
Atru.chr6.3468 Acer truncatum HOM05D006570 ORTHO05D008193 2.7e-157 559.3 424 67.7
Duzib133G0843 Durio zibethinus HOM05D006570 ORTHO05D008193 5.6e-155 551.6 459 62.7
COL.COLO4_19720 Corchorus olitorius HOM05D006570 ORTHO05D008193 2.0e-152 543.1 404 66.8
Potri.014G198000 Populus trichocarpa HOM05D006570 ORTHO05D008193 2.9e-151 539.3 444 61.9
Manes.13G058200 Manihot esculenta HOM05D006570 ORTHO05D008193 5.4e-150 535.0 448 61.8
Ciclev10015195m.g Citrus clementina HOM05D006570 ORTHO05D008193 2.7e-149 532.7 435 61.8
TWI18G1431 Tripterygium wilfordii HOM05D006570 ORTHO05D008193 2.7e-149 532.7 452 60.4
Haze_04512 Corylus avellana HOM05D006570 ORTHO05D008193 7.8e-149 531.2 430 62.6
Migut.D00755 Erythranthe guttata HOM05D006570 ORTHO05D008193 5.0e-148 528.5 432 63.2
Cfa006298 Carpinus fangiana HOM05D006570 ORTHO05D008193 1.5e-147 526.9 440 61.8
Gohir.D07G093500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 1.5e-147 526.9 451 61.9
Gorai.001G100200 Gossypium raimondii HOM05D006570 ORTHO05D008193 1.5e-147 526.9 451 61.9
Lj2A1109T67 Lonicera japonica HOM05D006570 ORTHO05D008193 5.6e-147 525.0 456 60.3
Prupe.6G214800 Prunus persica HOM05D006570 ORTHO05D008193 9.5e-147 524.2 412 64.1
CiPaw.07G077200 Carya illinoinensis HOM05D006570 ORTHO05D008193 3.6e-146 522.3 438 62.1
Gohir.A07G088500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 3.6e-146 522.3 450 62.9
RcHm_v2.0_Chr5g0052821 Rosa chinensis HOM05D006570 ORTHO05D008193 4.7e-146 521.9 442 61.1
PGSC0003DMG400020287 Solanum tuberosum HOM05D006570 ORTHO05D008193 6.8e-145 518.1 444 59.7
Phvul.010G109900 Phaseolus vulgaris HOM05D006570 ORTHO05D008193 4.4e-144 515.4 459 60.1
FvH4_3g28500 Fragaria vesca HOM05D006570 ORTHO05D008193 5.8e-144 515.0 442 60.2
Sopen09g012610 Solanum pennellii HOM05D006570 ORTHO05D008193 2.9e-143 512.7 444 59.5
Medtr8g028105 Medicago truncatula HOM05D006570 ORTHO05D008193 3.7e-143 512.3 405 62.7
Oeu020442.2 Olea europaea HOM05D006570 ORTHO05D008193 3.7e-143 512.3 449 59.2
Actinidia11648 Actinidia chinensis HOM05D006570 ORTHO05D008193 4.9e-143 511.9 409 63.3
Solyc09g018850.3 Solanum lycopersicum HOM05D006570 ORTHO05D008193 1.1e-142 510.8 444 59.2
Lj3g0023743 Lotus japonicus HOM05D006570 ORTHO05D008193 5.4e-142 508.4 461 58.1
FAN21G3910 Fragaria x ananassa HOM05D006570 ORTHO05D008193 7.0e-142 508.1 442 60.2
VMungo0331G0798 Vigna mungo HOM05D006570 ORTHO05D008193 2.1e-141 506.5 433 61.2
Glyma.07G059700 Glycine max HOM05D006570 ORTHO05D008193 3.5e-141 505.8 438 61.0
Dinv28772 Davidia involucrata HOM05D006570 ORTHO05D008193 7.8e-141 504.6 430 60.5
SalBow6G3933 Salvia bowleyana HOM05D006570 ORTHO05D008193 1.0e-140 504.2 441 58.3
Aqoxy7G03970 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 2.3e-140 503.1 476 56.5
TPR.G5123 Trifolium pratense HOM05D006570 ORTHO05D008193 2.3e-140 503.1 430 59.5
CANSAT01G0840 Cannabis sativa HOM05D006570 ORTHO05D008193 3.0e-140 502.7 407 61.9
PSO170G2695 Papaver somniferum HOM05D006570 ORTHO05D008193 3.0e-140 502.7 413 60.0
Aqoxy1G01428 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 6.6e-140 501.5 469 56.9
MD15G1141300 Malus domestica HOM05D006570 ORTHO05D008193 1.1e-139 500.7 418 61.7
SalBow2G2795 Salvia bowleyana HOM05D006570 ORTHO05D008193 1.1e-139 500.7 441 58.0
Lalb_Chr10g0100201 Lupinus albus HOM05D006570 ORTHO05D008193 5.6e-139 498.4 412 61.7
Ca_23570_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 7.3e-139 498.0 425 59.8
Ca_23579_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 7.3e-139 498.0 425 59.8
Peaxi162Scf12724g00014 Petunia axillaris HOM05D006570 ORTHO05D008193 1.2e-138 497.3 428 59.8
Cc01_g15710 Coffea canephora HOM05D006570 ORTHO05D008193 2.1e-138 496.5 455 56.9
vmacro02851 Vaccinium macrocarpon HOM05D006570 ORTHO05D008193 2.1e-138 496.5 438 61.0
Sabra14G0132400 Salix brachista HOM05D006570 ORTHO05D008193 3.1e-137 492.7 535 51.8
CsaV3_6G007600 Cucumis sativus L. HOM05D006570 ORTHO05D008193 4.0e-137 492.3 441 59.2
Nitab4.5_0005967g0010 Nicotiana tabacum HOM05D006570 ORTHO05D008193 5.2e-137 491.9 438 58.0
PGR083G1749 Punica granatum HOM05D006570 ORTHO05D008193 3.4e-136 489.2 413 61.0
arahy.Tifrunner.gnm1.ann1.L2UBUE Arachis hypogaea HOM05D006570 ORTHO05D008193 5.8e-136 488.4 441 58.3
Hma1.2p1_0834F.1_g225720 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 9.9e-136 487.6 400 62.0
TAR362G0032 Trochodendron aralioides HOM05D006570 ORTHO05D008193 1.3e-135 487.3 428 58.6
GSVIVG01004124001 Vitis vinifera HOM05D006570 ORTHO05D008193 1.3e-135 487.3 432 59.0
arahy.Tifrunner.gnm1.ann1.N5JW36 Arachis hypogaea HOM05D006570 ORTHO05D008193 1.7e-135 486.9 440 58.0
Ah.11g050650 Amaranthus hybridus HOM05D006570 ORTHO05D008193 4.9e-135 485.3 432 57.9
ECA236G3480 Erigeron canadensis HOM05D006570 ORTHO05D008193 6.4e-135 485.0 436 57.8
HanXRQChr16g0508391 Helianthus annuus HOM05D006570 ORTHO05D008193 3.2e-134 482.6 443 57.3
CAN.G3.13 Capsicum annuum HOM05D006570 ORTHO05D008193 3.5e-133 479.2 384 61.7
Nitab4.5_0009028g0030 Nicotiana tabacum HOM05D006570 ORTHO05D008193 3.5e-133 479.2 480 54.6
ClCG06G001630 Citrullus lanatus HOM05D006570 ORTHO05D008193 1.7e-132 476.9 445 58.4
CDE09G0147 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 4.7e-130 468.8 433 57.7
EL10Ac5g10565 Beta vulgaris HOM05D006570 ORTHO05D008193 6.2e-130 468.4 408 59.1
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 4.0e-129 465.7 402 60.2
MBI10_g46813_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 2.6e-128 463.0 443 54.6
SHI10196 Sapria himalayana HOM05D006570 ORTHO05D008193 1.3e-127 460.7 434 53.2
HPP92_007590 Vanilla planifolia HOM05D006570 ORTHO05D008193 1.7e-127 460.3 437 56.3
Sc05g0001500 Simmondsia chinensis HOM05D006570 ORTHO05D008193 9.2e-126 454.5 484 51.7
ATR0743G076 Amborella trichopoda HOM05D006570 ORTHO05D008193 1.0e-124 451.1 406 59.1
Psat4g158840 Pisum sativum HOM05D006570 ORTHO05D008193 5.1e-124 448.7 364 62.1
Hund09495 Selenicereus undatus HOM05D006570 ORTHO05D008193 1.6e-122 443.7 366 60.1
AUR62028620 Chenopodium quinoa HOM05D006570 ORTHO05D008193 2.8e-122 443.0 427 55.0
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 3.1e-121 439.5 393 58.8
AUR62008045 Chenopodium quinoa HOM05D006570 ORTHO05D008193 5.3e-121 438.7 427 55.0
AUR62032342 Chenopodium quinoa HOM05D006570 ORTHO05D008193 5.3e-121 438.7 427 55.0
Os12g0211400 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 6.0e-117 425.2 420 52.6
Zm00001eb411200 Zea mays HOM05D006570 ORTHO05D008193 6.0e-117 425.2 411 54.3
MELO3C022371.2 Cucumis melo HOM05D006570 ORTHO05D008193 1.5e-115 420.6 412 55.6
Hma1.2p1_0834F.1_g225710 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 1.4e-113 414.1 367 58.6
Lsat_1_v5_gn_8_98640 Lactuca sativa HOM05D006570 ORTHO05D008193 4.0e-113 412.5 424 54.2
Os12g0212100 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 5.1e-108 395.6 349 56.7
SEGI_12299 Sequoiadendron giganteum HOM05D006570 ORTHO05D008193 7.4e-107 391.7 468 47.2
FAN25G2405 Fragaria x ananassa HOM05D006570 ORTHO05D008193 2.2e-103 380.2 556 41.9
unitig_90.g27554 Utricularia gibba HOM05D006570 ORTHO05D008193 1.9e-99 367.1 426 49.1
Pp3c18_200 Physcomitrium patens HOM05D006570 ORTHO05D008193 3.8e-95 352.8 387 50.9
Eucgr.H00676 Eucalyptus grandis HOM05D006570 ORTHO05D008193 1.9e-94 350.5 312 56.7
Hma1.2p1_1756F.1_g301050 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 3.2e-94 349.7 320 56.2
Mapoly0043s0062 Marchantia polymorpha HOM05D006570 ORTHO05D008193 6.7e-92 342.0 457 44.9
Actinidia23139 Actinidia chinensis HOM05D006570 ORTHO05D008193 1.1e-91 341.3 426 47.7
MBI10_g40441_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 7.4e-83 312.0 305 52.1
SMO202G0040 Selaginella moellendorffii HOM05D006570 ORTHO05D008193 1.4e-78 297.7 290 53.1
PRCOL_00001086 Prasinoderma coloniale HOM05D006570 ORTHO05D008193 3.2e-70 270.0 406 39.9
FAN11G0847 Fragaria x ananassa HOM05D006570 ORTHO05D008193 2.3e-68 263.8 244 54.5
QL01p050877 Quercus lobata HOM05D006570 ORTHO05D008193 3.3e-67 260.0 264 52.3
MCO12G048 Micromonas commoda HOM05D006570 ORTHO05D008193 4.5e-64 249.6 455 36.5
Cre02.g082000 Chlamydomonas reinhardtii HOM05D006570 ORTHO05D008193 1.7e-55 221.1 294 43.5
CSS0008113 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 8.6e-47 192.2 126 73.0
CSS0032158 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 8.6e-47 192.2 126 73.0
Ca_29093_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 1.6e-45 188.0 355 34.6
GSVIVG01038286001 Vitis vinifera HOM05D006570 ORTHO05D008193 1.2e-43 181.8 185 48.6
DCAR_012713 Daucus carota HOM05D006570 ORTHO05D008193 1.6e-37 161.4 124 66.1
QL01p050896 Quercus lobata HOM05D006570 ORTHO05D008193 8.0e-37 159.1 112 71.4
CDE02G1275 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 7.8e-32 142.5 132 59.8
QL05p014267 Quercus lobata HOM05D006570 ORTHO05D008193 1.1e-25 122.1 190 38.9
CBR_g38520 Chara braunii HOM05D000019 ORTHO05D000048 8.6e-23 112.5 78 66.7
QL05p014599 Quercus lobata HOM05D006570 ORTHO05D008193 4.3e-22 110.2 139 42.4
PGR142G0081 Punica granatum HOM05D006570 ORTHO05D008193 1.6e-21 108.2 131 49.6
Glyma.16G028601 Glycine max HOM05D006570 ORTHO05D008193 6.2e-21 106.3 111 49.5
CBR_g38518 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-11 75.1 149 33.6
Os12g0211301 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 8.7e-07 59.3 65 52.3


User provided reference genes

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