Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g01550 Schrenkiella parvula HOM05D003576 ORTHO05D004124 1.0e-87 326.6 159 100.0
Sp7g03020 Schrenkiella parvula HOM05D003576 ORTHO05D004124 7.8e-51 204.1 185 57.8
BcaB06g27487 Brassica carinata HOM05D003576 ORTHO05D004124 1.7e-50 203.0 233 49.8
C04p47100 Brassica napus HOM05D003576 ORTHO05D004124 2.5e-49 199.1 235 48.1
BolC4t26304H Brassica oleracea HOM05D003576 ORTHO05D004124 2.5e-49 199.1 235 48.1
A04p13320 Brassica napus HOM05D003576 ORTHO05D004124 2.8e-48 195.7 234 47.9
BraA04t16990Z Brassica rapa HOM05D003576 ORTHO05D004124 1.8e-47 193.0 235 47.2
Duzib114G0196 Durio zibethinus HOM05D003576 ORTHO05D004124 1.4e-44 183.3 209 49.8
C03p07100 Brassica napus HOM05D002836 ORTHO05D003107 4.6e-43 178.3 176 57.4
Peaxi162Scf01175g00019 Petunia axillaris HOM05D003576 ORTHO05D004124 4.6e-43 178.3 233 44.6
FAN24G3530 Fragaria x ananassa HOM05D003576 ORTHO05D004124 5.0e-42 174.9 227 45.4
Atru.chr12.756 Acer truncatum HOM05D003576 ORTHO05D004124 7.3e-41 171.0 241 41.9
Atru.chr12.780 Acer truncatum HOM05D003576 ORTHO05D004124 7.3e-41 171.0 241 41.9
BcaNung01897 Brassica carinata HOM05D003576 ORTHO05D004124 2.8e-40 169.1 133 66.9
Thhalv10014094m.g Eutrema salsugineum HOM05D003576 ORTHO05D004124 3.6e-40 168.7 133 66.2
Hma1.2p1_0382F.1_g140100 Hydrangea macrophylla HOM05D003576 ORTHO05D004124 3.6e-40 168.7 241 41.5
Sp6g30460 Schrenkiella parvula HOM05D003576 ORTHO05D004124 3.6e-40 168.7 133 66.9
BcaNung06333 Brassica carinata HOM05D003576 ORTHO05D004124 4.7e-40 168.3 133 66.9
A02p02030 Brassica napus HOM05D003576 ORTHO05D004124 4.7e-40 168.3 133 66.9
C02p06240 Brassica napus HOM05D003576 ORTHO05D004124 4.7e-40 168.3 133 66.9
BolC2t06566H Brassica oleracea HOM05D003576 ORTHO05D004124 4.7e-40 168.3 133 66.9
BcaB01g05348 Brassica carinata HOM05D003576 ORTHO05D004124 6.2e-40 167.9 133 66.2
AL6G24180 Arabidopsis lyrata HOM05D003576 ORTHO05D004124 1.8e-39 166.4 133 65.4
BcaC04g19106 Brassica carinata HOM05D003576 ORTHO05D004124 2.3e-39 166.0 133 65.4
BolC9t59197H Brassica oleracea HOM05D003576 ORTHO05D004124 2.3e-39 166.0 133 65.4
CARHR199870 Cardamine hirsuta HOM05D003576 ORTHO05D004124 2.3e-39 166.0 133 65.4
THA.LOC104827300 Tarenaya hassleriana HOM05D003576 ORTHO05D004124 3.1e-39 165.6 119 70.6
FAN15G0532 Fragaria x ananassa HOM05D003576 ORTHO05D004124 4.0e-39 165.2 252 40.9
BcaC04g19105 Brassica carinata HOM05D003576 ORTHO05D004124 5.2e-39 164.9 133 65.4
COL.COLO4_23659 Corchorus olitorius HOM05D003576 ORTHO05D004124 5.2e-39 164.9 223 44.4
C09p63530 Brassica napus HOM05D003576 ORTHO05D004124 8.9e-39 164.1 133 64.7
BcaNung01144 Brassica carinata HOM05D003576 ORTHO05D004124 1.2e-38 163.7 134 65.7
A10p24700 Brassica napus HOM05D003576 ORTHO05D004124 1.2e-38 163.7 133 65.4
BraA10t44533Z Brassica rapa HOM05D003576 ORTHO05D004124 1.2e-38 163.7 133 65.4
Carub.0006s1173 Capsella rubella HOM05D003576 ORTHO05D004124 4.4e-38 161.8 133 63.9
AT5G13570 Arabidopsis thaliana HOM05D003576 ORTHO05D004124 5.8e-38 161.4 133 63.2
PSO063G6153 Papaver somniferum HOM05D003576 ORTHO05D004124 1.7e-37 159.8 246 40.2
TAR633G2490 Trochodendron aralioides HOM05D003576 ORTHO05D004124 2.2e-37 159.5 246 41.1
Ah.16g106400 Amaranthus hybridus HOM05D003576 ORTHO05D004124 6.4e-37 157.9 197 50.8
A04p13360 Brassica napus HOM05D003576 ORTHO05D004124 6.4e-37 157.9 127 63.0
arahy.Tifrunner.gnm1.ann1.33B581 Arachis hypogaea HOM05D003576 ORTHO05D004124 1.4e-36 156.8 133 60.2
arahy.Tifrunner.gnm1.ann1.THE0XD Arachis hypogaea HOM05D003576 ORTHO05D004124 1.4e-36 156.8 133 60.2
Sp3g29060 Schrenkiella parvula HOM05D003576 ORTHO05D004124 1.4e-36 156.8 201 45.8
BcaC04g19104 Brassica carinata HOM05D003576 ORTHO05D004124 2.4e-36 156.0 120 69.2
BraA04t16991Z Brassica rapa HOM05D003576 ORTHO05D004124 3.2e-36 155.6 242 39.7
BraA04t16993Z Brassica rapa HOM05D003576 ORTHO05D004124 3.2e-36 155.6 113 69.0
BraA04t16999Z Brassica rapa HOM05D003576 ORTHO05D004124 3.2e-36 155.6 113 69.0
Lalb_Chr03g0035911 Lupinus albus HOM05D003576 ORTHO05D004124 4.1e-36 155.2 119 63.9
BraA04t16996Z Brassica rapa HOM05D003576 ORTHO05D004124 5.4e-36 154.8 112 68.8
Nn2g13102 Nelumbo nucifera HOM05D003576 ORTHO05D004124 5.4e-36 154.8 232 39.7
Phvul.004G083500 Phaseolus vulgaris HOM05D003576 ORTHO05D004124 7.1e-36 154.5 133 58.6
Thecc.10G074000 Theobroma cacao HOM05D003576 ORTHO05D004124 7.1e-36 154.5 119 63.9
BcaB06g27496 Brassica carinata HOM05D003576 ORTHO05D004124 9.2e-36 154.1 127 63.0
CsaV3_5G036280 Cucumis sativus L. HOM05D003576 ORTHO05D004124 1.2e-35 153.7 156 54.5
Lalb_Chr01g0010001 Lupinus albus HOM05D003576 ORTHO05D004124 1.2e-35 153.7 119 63.0
CAN.G694.86 Capsicum annuum HOM05D003576 ORTHO05D004124 1.6e-35 153.3 133 59.4
ClCG05G021030 Citrullus lanatus HOM05D003576 ORTHO05D004124 1.6e-35 153.3 156 54.5
TPR.G36712 Trifolium pratense HOM05D003576 ORTHO05D004124 1.6e-35 153.3 133 58.6
C04p47110 Brassica napus HOM05D003576 ORTHO05D004124 2.1e-35 152.9 127 61.4
BolC4t26305H Brassica oleracea HOM05D003576 ORTHO05D004124 2.1e-35 152.9 127 61.4
BolC4t26310H Brassica oleracea HOM05D003576 ORTHO05D004124 2.1e-35 152.9 127 61.4
CDE04G0074 Ceratophyllum demersum HOM05D003576 ORTHO05D004124 2.1e-35 152.9 249 38.2
Cfa021515 Carpinus fangiana HOM05D003576 ORTHO05D004124 2.7e-35 152.5 133 60.9
Cc02_g11340 Coffea canephora HOM05D003576 ORTHO05D004124 2.7e-35 152.5 131 60.3
Glyma.02G074100 Glycine max HOM05D003576 ORTHO05D004124 2.7e-35 152.5 133 58.6
Gohir.A10G205700 Gossypium hirsutum HOM05D003576 ORTHO05D004124 2.7e-35 152.5 119 63.0
Gohir.D10G214000 Gossypium hirsutum HOM05D003576 ORTHO05D004124 2.7e-35 152.5 119 63.0
Gorai.011G239400 Gossypium raimondii HOM05D003576 ORTHO05D004124 2.7e-35 152.5 119 63.0
A04p13340 Brassica napus HOM05D003576 ORTHO05D004124 3.5e-35 152.1 112 67.9
A04p13380 Brassica napus HOM05D003576 ORTHO05D004124 3.5e-35 152.1 112 67.9
A04p13410 Brassica napus HOM05D003576 ORTHO05D004124 3.5e-35 152.1 112 67.9
Dinv36441 Davidia involucrata HOM05D003576 ORTHO05D004124 3.5e-35 152.1 133 58.6
MD01G1108400 Malus domestica HOM05D003576 ORTHO05D004124 3.5e-35 152.1 133 57.9
Nitab4.5_0000476g0030 Nicotiana tabacum HOM05D003576 ORTHO05D004124 3.5e-35 152.1 133 57.9
Prupe.2G213500 Prunus persica HOM05D003576 ORTHO05D004124 3.5e-35 152.1 133 58.6
QL08p055786 Quercus lobata HOM05D003576 ORTHO05D004124 3.5e-35 152.1 119 63.9
vmacro07071 Vaccinium macrocarpon HOM05D003576 ORTHO05D004124 3.5e-35 152.1 133 58.6
BraA04t16997Z Brassica rapa HOM05D003576 ORTHO05D004124 6.0e-35 151.4 115 67.8
Nitab4.5_0009985g0010 Nicotiana tabacum HOM05D003576 ORTHO05D004124 6.0e-35 151.4 133 57.9
Lj2g0011631 Lotus japonicus HOM05D003576 ORTHO05D004124 7.8e-35 151.0 133 58.6
Rhsim03G0120500 Rhododendron simsii HOM05D003576 ORTHO05D004124 7.8e-35 151.0 133 57.9
BolC3t13209H Brassica oleracea HOM05D003576 ORTHO05D004124 1.0e-34 150.6 233 44.2
Medtr6g033535 Medicago truncatula HOM05D003576 ORTHO05D004124 1.0e-34 150.6 133 57.9
Potri.008G039500 Populus trichocarpa HOM05D003576 ORTHO05D004124 1.0e-34 150.6 133 57.9
PGR044G0669 Punica granatum HOM05D003576 ORTHO05D004124 1.0e-34 150.6 233 40.3
Solyc05g056110.3 Solanum lycopersicum HOM05D003576 ORTHO05D004124 1.0e-34 150.6 133 57.1
Sopen05g034520 Solanum pennellii HOM05D003576 ORTHO05D004124 1.0e-34 150.6 133 57.1
Lj3A882G53 Lonicera japonica HOM05D003576 ORTHO05D004124 1.3e-34 150.2 133 56.4
MSTRG.374 Avicennia marina HOM05D003576 ORTHO05D004124 1.7e-34 149.8 119 63.9
FvH4_2g18840 Fragaria vesca HOM05D003576 ORTHO05D004124 1.7e-34 149.8 119 63.0
Glyma.16G155600 Glycine max HOM05D003576 ORTHO05D004124 1.7e-34 149.8 133 57.9
Sabra08G0027100 Salix brachista HOM05D003576 ORTHO05D004124 1.7e-34 149.8 134 58.2
Aqoxy1G02388 Aquilegia oxysepala HOM05D003576 ORTHO05D004124 2.3e-34 149.4 246 38.6
Ca_27771_v3 Cicer arietinum L. HOM05D003576 ORTHO05D004124 3.0e-34 149.1 119 62.2
Migut.F01985 Erythranthe guttata HOM05D003576 ORTHO05D004124 3.0e-34 149.1 119 63.9
MD07G1174600 Malus domestica HOM05D003576 ORTHO05D004124 3.0e-34 149.1 133 57.9
Manes.07G100300 Manihot esculenta HOM05D003576 ORTHO05D004124 3.0e-34 149.1 133 58.6
Sed0008938 Sechium edule HOM05D003576 ORTHO05D004124 3.0e-34 149.1 156 53.2
EL10Ac2g03301 Beta vulgaris HOM05D003576 ORTHO05D004124 3.9e-34 148.7 119 62.2
Dinv31323 Davidia involucrata HOM05D003576 ORTHO05D004124 3.9e-34 148.7 133 58.6
PGR142G1591 Punica granatum HOM05D003576 ORTHO05D004124 3.9e-34 148.7 133 57.9
RcHm_v2.0_Chr6g0284661 Rosa chinensis HOM05D003576 ORTHO05D004124 3.9e-34 148.7 119 62.2
DCAR_019104 Daucus carota HOM05D003576 ORTHO05D004124 6.6e-34 147.9 133 56.4
CsaV3_6G036430 Cucumis sativus L. HOM05D003576 ORTHO05D004124 8.6e-34 147.5 133 57.1
Sc20g0001840 Simmondsia chinensis HOM05D003576 ORTHO05D004124 8.6e-34 147.5 133 57.9
TWI15G0705 Tripterygium wilfordii HOM05D003576 ORTHO05D004124 8.6e-34 147.5 133 57.1
ClCG08G007510 Citrullus lanatus HOM05D003576 ORTHO05D004124 1.1e-33 147.1 133 57.1
Ciclev10032124m.g Citrus clementina HOM05D003576 ORTHO05D004124 1.1e-33 147.1 119 62.2
Potri.010G222800 Populus trichocarpa HOM05D003576 ORTHO05D004124 1.1e-33 147.1 133 57.9
HPP92_020748 Vanilla planifolia HOM05D003576 ORTHO05D004124 1.1e-33 147.1 242 38.8
Actinidia38283 Actinidia chinensis HOM05D003576 ORTHO05D004124 1.5e-33 146.7 133 57.9
ATR0048G008 Amborella trichopoda HOM05D003576 ORTHO05D004124 1.5e-33 146.7 240 38.3
CSS0018972 Camellia sinensis var. sinensis HOM05D003576 ORTHO05D004124 1.9e-33 146.4 133 55.6
CSS0040774 Camellia sinensis var. sinensis HOM05D003576 ORTHO05D004124 1.9e-33 146.4 133 55.6
Sabra10G0172200 Salix brachista HOM05D003576 ORTHO05D004124 1.9e-33 146.4 133 57.1
AUR62018250 Chenopodium quinoa HOM05D003576 ORTHO05D004124 2.5e-33 146.0 133 55.6
GSVIVG01016273001 Vitis vinifera HOM05D003576 ORTHO05D004124 2.5e-33 146.0 133 56.4
CANSAT56G0320 Cannabis sativa HOM05D003576 ORTHO05D004124 3.3e-33 145.6 119 61.3
Eucgr.J01085 Eucalyptus grandis HOM05D003576 ORTHO05D004124 3.3e-33 145.6 133 57.1
SHI19520 Sapria himalayana HOM05D003576 ORTHO05D004124 5.6e-33 144.8 219 39.3
CiPaw.02G173900 Carya illinoinensis HOM05D003576 ORTHO05D004124 1.2e-32 143.7 133 56.4
THA.LOC104809882 Tarenaya hassleriana HOM05D003576 ORTHO05D004124 1.2e-32 143.7 133 57.1
Ah.10g032640 Amaranthus hybridus HOM05D003576 ORTHO05D004124 1.6e-32 143.3 216 41.7
HanXRQChr15g0496951 Helianthus annuus HOM05D003576 ORTHO05D004124 2.1e-32 142.9 133 57.1
Os02g0805900 Oryza sativa ssp. japonica HOM05D003576 ORTHO05D004124 2.1e-32 142.9 234 37.2
Sed0006763 Sechium edule HOM05D003576 ORTHO05D004124 2.8e-32 142.5 133 55.6
Zm00001eb273430 Zea mays HOM05D003576 ORTHO05D004124 3.6e-32 142.1 234 36.3
ECA238G1405 Erigeron canadensis HOM05D003576 ORTHO05D004124 4.7e-32 141.7 119 58.8
Lsat_1_v5_gn_9_69180 Lactuca sativa HOM05D003576 ORTHO05D004124 4.7e-32 141.7 133 56.4
Aa31LG11G7770 Aethionema arabicum HOM05D003576 ORTHO05D004124 6.2e-32 141.4 176 48.9
Haze_16891 Corylus avellana HOM05D003576 ORTHO05D004124 6.2e-32 141.4 240 40.4
BcaB06g27489 Brassica carinata HOM05D003576 ORTHO05D004124 4.0e-31 138.7 191 43.5
ECA232G3526 Erigeron canadensis HOM05D003576 ORTHO05D004124 5.2e-31 138.3 133 55.6
Mapoly0154s0022 Marchantia polymorpha HOM05D003576 ORTHO05D004124 5.2e-31 138.3 236 35.6
MELO3C012428.2 Cucumis melo HOM05D003576 ORTHO05D004124 8.9e-31 137.5 146 53.4
Cpa.g.sc53.83 Carica papaya HOM05D003576 ORTHO05D004124 1.2e-30 137.1 207 41.5
unitig_699.g19224 Utricularia gibba HOM05D003576 ORTHO05D004124 3.4e-30 135.6 227 37.9
PSO339G5183 Papaver somniferum HOM05D003576 ORTHO05D004124 4.4e-30 135.2 232 37.9
CBR_g38931 Chara braunii HOM05D003576 ORTHO05D004124 9.9e-30 134.0 235 35.7
Migut.F01761 Erythranthe guttata HOM05D003576 ORTHO05D004124 2.2e-29 132.9 119 55.5
AUR62037754 Chenopodium quinoa HOM05D003576 ORTHO05D004124 2.9e-29 132.5 157 47.1
TAR636G0323 Trochodendron aralioides HOM05D003576 ORTHO05D004124 2.9e-29 132.5 131 53.4
SGA_v2.0_scaffold100G29594 Striga asiatica HOM05D003576 ORTHO05D004124 1.1e-28 130.6 256 35.9
PSO339G2752 Papaver somniferum HOM05D003576 ORTHO05D004124 2.4e-28 129.4 134 49.3
PSO384G2156 Papaver somniferum HOM05D003576 ORTHO05D004124 3.2e-28 129.0 134 48.5
AagrBONN_evm.TU.Sc2ySwM_228.4941 Anthoceros agrestis HOM05D003576 ORTHO05D004124 9.2e-28 127.5 238 31.9
BcaB06g27493 Brassica carinata HOM05D003576 ORTHO05D004124 9.2e-28 127.5 127 55.1
SalBow3G2401 Salvia bowleyana HOM05D003576 ORTHO05D004124 1.2e-27 127.1 177 42.9
SMO356G0089 Selaginella moellendorffii HOM05D003576 ORTHO05D004124 1.6e-27 126.7 235 32.8
CiPaw.01G272700 Carya illinoinensis HOM05D003576 ORTHO05D004124 2.1e-27 126.3 144 50.0
Pp3c10_5620 Physcomitrium patens HOM05D003576 ORTHO05D004124 7.8e-27 124.4 237 32.5
Sp7g03350 Schrenkiella parvula HOM05D003576 ORTHO05D004124 8.6e-26 120.9 77 75.3
Actinidia06773 Actinidia chinensis HOM05D003576 ORTHO05D004124 2.5e-25 119.4 97 61.9
Pp3c1_22690 Physcomitrium patens HOM05D003576 ORTHO05D004124 4.3e-25 118.6 237 30.4
CSS0030842 Camellia sinensis var. sinensis HOM05D003576 ORTHO05D004124 7.3e-25 117.9 130 49.2
Pp3c2_16830 Physcomitrium patens HOM05D003576 ORTHO05D004124 7.3e-25 117.9 237 30.4
Ca_07562_v3 Cicer arietinum L. HOM05D003576 ORTHO05D004124 1.2e-24 117.1 106 56.6
CBR_g39890 Chara braunii HOM05D003576 ORTHO05D004124 1.4e-23 113.6 122 45.1
CDE03G0119 Ceratophyllum demersum HOM05D003576 ORTHO05D004124 1.8e-23 113.2 159 41.5
Psat1g098680 Pisum sativum HOM05D003576 ORTHO05D004124 1.8e-23 113.2 97 58.8
Oeu017646.1 Olea europaea HOM05D003576 ORTHO05D004124 1.2e-22 110.5 97 58.8
MELO3C019797.2 Cucumis melo HOM05D003576 ORTHO05D004124 1.4e-20 103.6 89 59.6
CSS0009257 Camellia sinensis var. sinensis HOM05D003576 ORTHO05D004124 3.0e-18 95.9 75 61.3
BolC4t26308H Brassica oleracea HOM05D003576 ORTHO05D004124 8.7e-18 94.4 172 36.6
A04p13390 Brassica napus HOM05D003576 ORTHO05D004124 1.3e-16 90.5 171 35.7
Cfa023847 Carpinus fangiana HOM05D003576 ORTHO05D004124 9.0e-15 84.3 134 37.3
BcaNung01892 Brassica carinata HOM05D003576 ORTHO05D000199 2.6e-14 82.8 49 75.5
BcaB06g27491 Brassica carinata HOM05D003576 ORTHO05D004124 2.2e-13 79.7 77 54.5
SEGI_06233 Sequoiadendron giganteum HOM05D003576 ORTHO05D004124 3.8e-13 79.0 106 38.7
Psat1g098640 Pisum sativum HOM05D003576 ORTHO05D004124 4.9e-13 78.6 120 40.0
CDE03G0152 Ceratophyllum demersum HOM05D003576 ORTHO05D004124 3.2e-12 75.9 66 53.0
AL4G23990 Arabidopsis lyrata HOM05D003576 ORTHO05D004124 4.2e-12 75.5 89 46.1
MCO14G142 Micromonas commoda HOM05D003576 ORTHO05D004124 7.1e-12 74.7 121 34.7
Psat1g000080 Pisum sativum HOM05D003576 ORTHO05D004124 6.0e-11 71.6 157 33.1
CDE03G0459 Ceratophyllum demersum HOM05D003576 ORTHO05D004124 4.3e-09 65.5 148 32.4
TAR636G2201 Trochodendron aralioides HOM05D003576 ORTHO05D004124 1.6e-08 63.5 118 37.3
FAN15G1487 Fragaria x ananassa HOM05D003576 ORTHO05D004124 2.8e-08 62.8 47 63.8
CSS0032612 Camellia sinensis var. sinensis HOM05D003576 ORTHO05D004124 6.2e-08 61.6 52 61.5
CSS0033760 Camellia sinensis var. sinensis HOM05D003576 ORTHO05D004124 6.2e-08 61.6 52 59.6
CSS0050114 Camellia sinensis var. sinensis HOM05D003576 ORTHO05D004124 6.2e-08 61.6 52 61.5
CSS0046774 Camellia sinensis var. sinensis HOM05D003576 ORTHO05D004124 1.4e-07 60.5 52 59.6
Zm00001eb290030 Zea mays HOM05D003576 ORTHO05D004124 9.0e-07 57.8 39 64.1
Zm00001eb366000 Zea mays HOM05D003576 ORTHO05D004124 9.0e-07 57.8 39 64.1
C04p47130 Brassica napus HOM05D003576 ORTHO05D004124 7.6e-06 54.7 82 34.1


User provided reference genes

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