Gene: C03p07100

General Information

Structural Information

  • Species Brassica napus
  • Gene Identifier C03p07100
  • Transcript Identifier C03p07100
  • Gene Type Coding gene
  • Location C03 : 3473622-3477109 : positive

Gene Family Information

  • ID HOM05D002836
  • #Genes/#Species 244/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid C03p07100.1_BnaDAR
  • v5 BnaC03g05950D
  • single_cell_id C03p07100.1-BnaDAR
  • ensembl GSBRNA2T00140340001

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042256
IEA
InterPromature ribosome assembly
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G55620
GO:0071215
ISO
PLAZA Integrative Orthologycellular response to abscisic acid stimulus AT3G55620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0016787
IEA
InterProhydrolase activity
GO:0030145
IEA
InterPromanganese ion binding
GO:0043022
IEA
InterProribosome binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G55620
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G55620
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G55620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036249 Thioredoxin-like superfamily
IPR013766 Thioredoxin domain
IPR036189 mRNA decapping protein 2, Box A domain superfamily
IPR002769 Translation initiation factor IF6
IPR007722 mRNA decapping protein 2, Box A domain
IPR015797 NUDIX hydrolase-like domain superfamily
IPR000086 NUDIX hydrolase domain
Mapman id Description
16.4.2.2.2 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA decapping complex.hydrolase component DCP2
17.1.2.2.3.8 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.ribosome assembly factor (eIF6)