Gene: CSS0032612
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0032612
- Transcript Identifier CSS0032612.1
- Gene Type Coding gene
- Location Chr1 : 198636683-198637365 : positive
Gene Family Information
- ID HOM05D003576
- #Genes/#Species 191/96
- Phylogenetic origin
- ID ORTHO05D004124
- #Genes/#Species 190/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CSS0032612.1
Descriptions
- Description unnamed protein product [Coffea canephora]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019048 | ISO | PLAZA Integrative Orthology | modulation by virus of host process | AT5G13570 |
| GO:0016441 | ISO | PLAZA Integrative Orthology | posttranscriptional gene silencing | AT5G13570 |
| GO:0000290 | ISO | PLAZA Homology (enrichment) | deadenylation-dependent decapping of nuclear-transcribed mRNA | HOM05D003576 |
| GO:0000184 | ISO | PLAZA Homology (enrichment) | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | HOM05D003576 |
| GO:0006402 | ISO | PLAZA Integrative Orthology | mRNA catabolic process | AT5G13570 |
| GO:0010072 | ISO | PLAZA Integrative Orthology | primary shoot apical meristem specification | AT5G13570 |
| GO:0009791 | ISO | PLAZA Integrative Orthology | post-embryonic development | AT5G13570 |
| GO:0031087 | ISO | PLAZA Integrative Orthology | deadenylation-independent decapping of nuclear-transcribed mRNA | AT5G13570 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | ISO | PLAZA Homology (enrichment) | RNA binding | HOM05D003576 |
| GO:0016787 | ISO | PLAZA Homology (enrichment) | hydrolase activity | HOM05D003576 |
| GO:0030145 | ISO | PLAZA Integrative Orthology | manganese ion binding | AT5G13570 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G13570 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT5G13570 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G13570 |
| GO:0000287 | ISO | PLAZA Integrative Orthology | magnesium ion binding | AT5G13570 |
| GO:0050072 | ISO | PLAZA Integrative Orthology | m7G(5')pppN diphosphatase activity | AT5G13570 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G13570 |
| GO:0000932 | ISO | PLAZA Integrative Orthology | P-body | AT5G13570 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |