Gene: AL4G23990

General Information

Structural Information

  • Species Arabidopsis lyrata
  • Gene Identifier AL4G23990
  • Transcript Identifier AL4G23990.t1
  • Gene Type Coding gene
  • Location scaffold_4 : 13532486-13533560 : negative

Gene Family Information

  • ID HOM05D003576
  • #Genes/#Species 191/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id AL4G23990.v2.1
  • synonym fgenesh1_pm.C_scaffold_4000764
  • pacid 35921786

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000184
ISO
PLAZA Homology (enrichment)nuclear-transcribed mRNA catabolic process, nonsense-mediated decay HOM05D003576
GO:0000290
ISO
PLAZA Homology (enrichment)deadenylation-dependent decapping of nuclear-transcribed mRNA HOM05D003576

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D003576
GO:0030145
ISO
PLAZA Homology (enrichment)manganese ion binding HOM05D003576
GO:0050072
ISO
PLAZA Homology (enrichment)m7G(5')pppN diphosphatase activity HOM05D003576
GO:0016787
ISO
PLAZA Homology (enrichment)hydrolase activity HOM05D003576

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015797 NUDIX hydrolase-like domain superfamily
IPR000086 NUDIX hydrolase domain
Mapman id Description
16.4.2.2.2 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA decapping complex.hydrolase component DCP2