Gene: Zm00001eb290030

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb290030
  • Transcript Identifier Zm00001eb290030_T001
  • Gene Type Coding gene
  • Location 6 : 163958419-163959354 : negative

Gene Family Information

  • ID HOM05D003576
  • #Genes/#Species 191/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb290030_T001
  • pid Zm00001eb290030_P001
  • uniprot A0A1D6HXL6
  • uniprot A0A1D6I826
  • uniprot A0A3L6EB65
  • uniprot A0A1D6LP99

Descriptions

  • Description Zm00001e031872
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006402
ISO
PLAZA Integrative OrthologymRNA catabolic process AT5G13570
GO:0019048
ISO
PLAZA Integrative Orthologymodulation by virus of host process AT5G13570
GO:0016441
ISO
PLAZA Integrative Orthologyposttranscriptional gene silencing AT5G13570
GO:0010072
ISO
PLAZA Integrative Orthologyprimary shoot apical meristem specification AT5G13570
GO:0009791
ISO
PLAZA Integrative Orthologypost-embryonic development AT5G13570
GO:0031087
ISO
PLAZA Integrative Orthologydeadenylation-independent decapping of nuclear-transcribed mRNA AT5G13570
GO:0000184
ISO
PLAZA Homology (enrichment)nuclear-transcribed mRNA catabolic process, nonsense-mediated decay HOM05D003576
GO:0006520
IEA
GOA Databasecellular amino acid metabolic process
GO:0006468
IEA
GOA Databaseprotein phosphorylation
GO:0000290
IBA
GOA Databasedeadenylation-dependent decapping of nuclear-transcribed mRNA

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G13570
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G13570
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT5G13570
GO:0000287
ISO
PLAZA Integrative Orthologymagnesium ion binding AT5G13570
GO:0030145
IEA
GOA Databasemanganese ion binding
GO:0030145
IEA
InterPromanganese ion binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016787
IEA
InterProhydrolase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0016829
IEA
GOA Databaselyase activity
GO:0004672
IEA
GOA Databaseprotein kinase activity
GO:0050072
IBA
GOA Databasem7G(5')pppN diphosphatase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT5G13570
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005737
IBA
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036189 mRNA decapping protein 2, Box A domain superfamily
IPR007722 mRNA decapping protein 2, Box A domain
IPR015797 NUDIX hydrolase-like domain superfamily
IPR000086 NUDIX hydrolase domain
Mapman id Description
16.4.2.2.2 RNA processing.RNA surveillance.mRNA deadenylation-dependent decay.mRNA decapping complex.hydrolase component DCP2