Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g01070 Schrenkiella parvula HOM05D004874 ORTHO05D006796 0.0e+00 2573.1 1278 100.0
AL4G11330 Arabidopsis lyrata HOM05D004874 ORTHO05D006796 0.0e+00 2362.0 1276 91.4
BcaB08g35028 Brassica carinata HOM05D004874 ORTHO05D006796 0.0e+00 2352.8 1277 91.4
CARHR113090 Cardamine hirsuta HOM05D004874 ORTHO05D006796 0.0e+00 2350.9 1267 91.6
AT2G22010 Arabidopsis thaliana HOM05D004874 ORTHO05D006796 0.0e+00 2348.5 1269 91.3
BcaC07g41106 Brassica carinata HOM05D004874 ORTHO05D006796 0.0e+00 2336.2 1278 90.9
C08p41080 Brassica napus HOM05D004874 ORTHO05D006796 0.0e+00 2332.8 1278 90.8
BolC8t51674H Brassica oleracea HOM05D004874 ORTHO05D006796 0.0e+00 2326.2 1284 90.4
Carub.0004s0115 Capsella rubella HOM05D004874 ORTHO05D006796 0.0e+00 2326.2 1266 90.6
A09p57840 Brassica napus HOM05D004874 ORTHO05D006796 0.0e+00 2311.6 1277 90.4
Thhalv10000015m.g Eutrema salsugineum HOM05D004874 ORTHO05D006796 0.0e+00 2301.9 1272 89.9
BraA09t41177Z Brassica rapa HOM05D004874 ORTHO05D006796 0.0e+00 2296.2 1283 89.6
THA.LOC104804146 Tarenaya hassleriana HOM05D004874 ORTHO05D006796 0.0e+00 2018.8 1271 77.7
Aa31LG7G14640 Aethionema arabicum HOM05D004874 ORTHO05D006796 0.0e+00 1979.9 1270 78.1
Ciclev10024728m.g Citrus clementina HOM05D004874 ORTHO05D006796 0.0e+00 1821.2 1274 69.4
Atru.chr4.387 Acer truncatum HOM05D004874 ORTHO05D006796 0.0e+00 1802.3 1275 69.6
Thecc.01G111200 Theobroma cacao HOM05D004874 ORTHO05D006796 0.0e+00 1800.4 1277 69.0
Gorai.011G111800 Gossypium raimondii HOM05D004874 ORTHO05D006796 0.0e+00 1783.1 1277 68.4
Gohir.D10G102100 Gossypium hirsutum HOM05D004874 ORTHO05D006796 0.0e+00 1773.8 1277 68.2
Gohir.A10G086600 Gossypium hirsutum HOM05D004874 ORTHO05D006796 0.0e+00 1768.8 1277 68.1
Phvul.009G140100 Phaseolus vulgaris HOM05D004874 ORTHO05D006796 0.0e+00 1752.6 1274 67.0
QL06p032401 Quercus lobata HOM05D004874 ORTHO05D006796 0.0e+00 1751.9 1278 67.1
TWI74G1507 Tripterygium wilfordii HOM05D004874 ORTHO05D006796 0.0e+00 1749.9 1278 66.9
Glyma.04G220000 Glycine max HOM05D004874 ORTHO05D006796 0.0e+00 1740.3 1273 66.5
Glyma.06G145900 Glycine max HOM05D004874 ORTHO05D006796 0.0e+00 1738.4 1273 66.8
Potri.005G083800 Populus trichocarpa HOM05D004874 ORTHO05D006796 0.0e+00 1735.7 1279 66.9
Sabra05G0068900 Salix brachista HOM05D004874 ORTHO05D006796 0.0e+00 1732.2 1283 66.9
VMungo1309G2704 Vigna mungo HOM05D004874 ORTHO05D006796 0.0e+00 1723.0 1275 65.8
Prupe.6G174100 Prunus persica HOM05D004874 ORTHO05D006796 0.0e+00 1722.6 1277 67.3
RcHm_v2.0_Chr2g0116231 Rosa chinensis HOM05D004874 ORTHO05D006796 0.0e+00 1721.8 1277 66.7
MD15G1333600 Malus domestica HOM05D004874 ORTHO05D006796 0.0e+00 1721.4 1277 66.8
Manes.13G077640 Manihot esculenta HOM05D004874 ORTHO05D006796 0.0e+00 1718.7 1277 67.0
Dinv19497 Davidia involucrata HOM05D004874 ORTHO05D006796 0.0e+00 1714.9 1276 66.8
CANSAT01G0647 Cannabis sativa HOM05D004874 ORTHO05D006796 0.0e+00 1711.0 1277 65.8
Potri.007G081900 Populus trichocarpa HOM05D004874 ORTHO05D006796 0.0e+00 1710.3 1279 66.1
FvH4_1g22150 Fragaria vesca HOM05D004874 ORTHO05D006796 0.0e+00 1709.9 1281 66.3
Lj1g0000337 Lotus japonicus HOM05D004874 ORTHO05D006796 0.0e+00 1701.8 1278 65.3
CSS0018271 Camellia sinensis var. sinensis HOM05D004874 ORTHO05D006796 0.0e+00 1695.2 1276 65.9
GSVIVG01022217001 Vitis vinifera HOM05D004874 ORTHO05D006796 0.0e+00 1692.9 1275 66.4
Medtr3g094770 Medicago truncatula HOM05D004874 ORTHO05D006796 0.0e+00 1691.8 1278 64.9
FAN26G2351 Fragaria x ananassa HOM05D004874 ORTHO05D006796 0.0e+00 1691.4 1281 66.0
FAN28G2703 Fragaria x ananassa HOM05D004874 ORTHO05D006796 0.0e+00 1689.5 1281 65.7
TPR.G23744 Trifolium pratense HOM05D004874 ORTHO05D006796 0.0e+00 1689.1 1277 64.4
FAN23G3027 Fragaria x ananassa HOM05D004874 ORTHO05D006796 0.0e+00 1686.4 1290 65.5
FAN19G0866 Fragaria x ananassa HOM05D004874 ORTHO05D006796 0.0e+00 1682.5 1307 64.7
Ca_16889_v3 Cicer arietinum L. HOM05D004874 ORTHO05D006796 0.0e+00 1681.8 1277 64.1
Actinidia15577 Actinidia chinensis HOM05D004874 ORTHO05D006796 0.0e+00 1674.1 1276 64.3
CSS0002284 Camellia sinensis var. sinensis HOM05D004874 ORTHO05D006796 0.0e+00 1674.1 1280 65.2
Psat5g065960 Pisum sativum HOM05D004874 ORTHO05D006796 0.0e+00 1672.1 1277 64.1
arahy.Tifrunner.gnm1.ann1.ZQBN5H Arachis hypogaea HOM05D004874 ORTHO05D006796 0.0e+00 1671.8 1277 64.4
arahy.Tifrunner.gnm1.ann1.M2IALY Arachis hypogaea HOM05D004874 ORTHO05D006796 0.0e+00 1669.4 1277 64.3
Lalb_Chr11g0068041 Lupinus albus HOM05D004874 ORTHO05D006796 0.0e+00 1664.8 1274 64.2
Haze_25029 Corylus avellana HOM05D004874 ORTHO05D006796 0.0e+00 1660.6 1243 66.4
ClCG01G016180 Citrullus lanatus HOM05D004874 ORTHO05D006796 0.0e+00 1654.8 1275 64.7
Nn5g28922 Nelumbo nucifera HOM05D004874 ORTHO05D006796 0.0e+00 1653.3 1277 64.5
Rhsim10G0151300 Rhododendron simsii HOM05D004874 ORTHO05D006796 0.0e+00 1653.3 1277 65.0
PSO541G0735 Papaver somniferum HOM05D004874 ORTHO05D006796 0.0e+00 1637.5 1276 63.6
CsaV3_6G042450 Cucumis sativus L. HOM05D004874 ORTHO05D006796 0.0e+00 1634.8 1276 63.6
Manes.12G141800 Manihot esculenta HOM05D004874 ORTHO05D006796 0.0e+00 1628.2 1274 63.6
PSO675G8458 Papaver somniferum HOM05D004874 ORTHO05D006796 0.0e+00 1625.5 1276 63.2
Sopen04g023580 Solanum pennellii HOM05D004874 ORTHO05D006796 0.0e+00 1613.2 1287 62.6
ECA238G3208 Erigeron canadensis HOM05D004874 ORTHO05D006796 0.0e+00 1612.4 1275 61.8
Eucgr.H04838 Eucalyptus grandis HOM05D004874 ORTHO05D006796 0.0e+00 1612.0 1277 62.8
Solyc04g054140.4 Solanum lycopersicum HOM05D004874 ORTHO05D006796 0.0e+00 1605.9 1292 62.4
Aqoxy6G00493 Aquilegia oxysepala HOM05D004874 ORTHO05D006796 0.0e+00 1603.6 1286 62.9
CAN.G1728.1 Capsicum annuum HOM05D004874 ORTHO05D006796 0.0e+00 1598.6 1273 62.2
Peaxi162Scf00323g00112 Petunia axillaris HOM05D004874 ORTHO05D006796 0.0e+00 1598.6 1244 63.7
Oeu028379.4 Olea europaea HOM05D004874 ORTHO05D006796 0.0e+00 1594.3 1379 58.8
Cc07_g16070 Coffea canephora HOM05D004874 ORTHO05D006796 0.0e+00 1592.8 1278 62.2
Migut.H02425 Erythranthe guttata HOM05D004874 ORTHO05D006796 0.0e+00 1591.6 1280 62.1
Lsat_1_v5_gn_2_65401 Lactuca sativa HOM05D004874 ORTHO05D006796 0.0e+00 1586.2 1279 61.5
EL10Ac6g14746 Beta vulgaris HOM05D004874 ORTHO05D006796 0.0e+00 1580.8 1354 58.5
HanXRQChr14g0446191 Helianthus annuus HOM05D004874 ORTHO05D006796 0.0e+00 1575.5 1278 60.6
PGR102G1404 Punica granatum HOM05D004874 ORTHO05D006796 0.0e+00 1570.1 1274 61.9
HanXRQChr10g0295251 Helianthus annuus HOM05D004874 ORTHO05D006796 0.0e+00 1565.8 1277 60.3
Sed0015455 Sechium edule HOM05D004874 ORTHO05D006796 0.0e+00 1560.8 1274 61.8
AUR62016271 Chenopodium quinoa HOM05D004874 ORTHO05D006796 0.0e+00 1545.8 1276 60.1
Lalb_Chr13g0296191 Lupinus albus HOM05D004874 ORTHO05D006796 0.0e+00 1542.7 1275 59.4
AUR62003312 Chenopodium quinoa HOM05D004874 ORTHO05D006796 0.0e+00 1536.2 1276 59.7
SGA_v2.0_scaffold2G01299 Striga asiatica HOM05D004874 ORTHO05D006796 0.0e+00 1526.1 1373 58.0
Hund19660 Selenicereus undatus HOM05D004874 ORTHO05D006796 0.0e+00 1519.6 1210 62.4
MELO3C007488.2 Cucumis melo HOM05D004874 ORTHO05D006796 0.0e+00 1515.7 1279 60.5
TAR628G0415 Trochodendron aralioides HOM05D004874 ORTHO05D006796 0.0e+00 1490.3 1189 63.5
SalBow6G4347 Salvia bowleyana HOM05D004874 ORTHO05D006796 0.0e+00 1488.8 1179 62.8
DCAR_014257 Daucus carota HOM05D004874 ORTHO05D006796 0.0e+00 1475.7 1268 58.8
ATR0564G436 Amborella trichopoda HOM05D004874 ORTHO05D006796 0.0e+00 1473.8 1270 58.7
Zm00001eb328050 Zea mays HOM05D004874 ORTHO05D006796 0.0e+00 1416.4 1278 55.9
TAR376G0110 Trochodendron aralioides HOM05D004874 ORTHO05D006796 0.0e+00 1404.4 1041 66.0
MD01G1017400 Malus domestica HOM05D004874 ORTHO05D006796 0.0e+00 1385.2 1036 67.2
Nitab4.5_0000156g0190 Nicotiana tabacum HOM05D004874 ORTHO05D006796 0.0e+00 1370.9 1042 64.9
SEGI_33214 Sequoiadendron giganteum HOM05D004874 ORTHO05D006796 0.0e+00 1341.6 1285 53.5
CDE07G0820 Ceratophyllum demersum HOM05D004874 ORTHO05D006796 0.0e+00 1333.9 1276 53.6
PGSC0003DMG400012951 Solanum tuberosum HOM05D004874 ORTHO05D006796 0.0e+00 1327.8 1046 63.0
Duzib147G0760 Durio zibethinus HOM05D004874 ORTHO05D006796 0.0e+00 1319.3 1268 55.2
unitig_899.g14600 Utricularia gibba HOM05D004874 ORTHO05D006796 0.0e+00 1273.1 1177 55.7
COL.COLO4_11028 Corchorus olitorius HOM05D004874 ORTHO05D006796 0.0e+00 1239.9 1272 53.2
CDE04G1796 Ceratophyllum demersum HOM05D004874 ORTHO05D006796 0.0e+00 1173.7 1224 50.5
Cpa.g.sc196.7 Carica papaya HOM05D004874 ORTHO05D006796 0.0e+00 1151.7 829 68.5
FAN01G2715 Fragaria x ananassa HOM05D004874 ORTHO05D006796 0.0e+00 1139.8 941 61.5
Mapoly0047s0138 Marchantia polymorpha HOM05D004874 ORTHO05D006796 0.0e+00 1101.3 1320 46.7
CiPaw.04G092800 Carya illinoinensis HOM05D004874 ORTHO05D006796 0.0e+00 1100.5 810 68.5
Pp3c1_33900 Physcomitrium patens HOM05D004874 ORTHO05D006796 0.0e+00 1088.9 1269 47.0
Ah.02g124400 Amaranthus hybridus HOM05D004874 ORTHO05D006796 0.0e+00 1088.2 876 61.0
Pp3c2_2760 Physcomitrium patens HOM05D004874 ORTHO05D006796 6.1e-311 1071.2 1325 45.8
SMO143G0116 Selaginella moellendorffii HOM05D004874 ORTHO05D006796 3.6e-308 1062.0 1188 48.4
Lj2C562G3 Lonicera japonica HOM05D004874 ORTHO05D006796 6.2e-308 1061.2 831 62.9
Pp3c17_14550 Physcomitrium patens HOM05D004874 ORTHO05D006796 1.6e-303 1046.6 1337 45.2
FAN06G3019 Fragaria x ananassa HOM05D004874 ORTHO05D006796 2.1e-303 1046.2 942 59.0
FAN06G4447 Fragaria x ananassa HOM05D004874 ORTHO05D006796 1.7e-294 1016.5 942 58.1
Oeu030684.1 Olea europaea HOM05D004874 ORTHO05D006796 2.5e-293 1012.7 764 64.9
AagrBONN_evm.TU.Sc2ySwM_228.911 Anthoceros agrestis HOM05D004874 ORTHO05D006796 3.3e-293 1012.3 1143 49.8
MBI02_g13022_MAGBIO Magnolia biondii HOM05D004874 ORTHO05D006796 9.0e-291 1004.2 832 60.0
vmacro12908 Vaccinium macrocarpon HOM05D004874 ORTHO05D006796 6.7e-278 961.4 777 61.3
MSTRG.2539 Avicennia marina HOM05D004874 ORTHO05D006796 5.3e-275 951.8 764 63.2
FAN10G0201 Fragaria x ananassa HOM05D004874 ORTHO05D006796 1.4e-259 900.6 691 65.6
CBR_g4334 Chara braunii HOM05D004874 ORTHO05D006796 3.7e-220 769.6 1503 35.3
HPP92_016848 Vanilla planifolia HOM05D004874 ORTHO05D006796 6.4e-212 742.3 627 60.1
FvH4_7g04730 Fragaria vesca HOM05D004874 ORTHO05D006796 1.2e-194 684.9 552 62.5
HPP92_016847 Vanilla planifolia HOM05D004874 ORTHO05D006796 1.6e-191 674.5 615 54.6
FAN03G2613 Fragaria x ananassa HOM05D004874 ORTHO05D006796 8.9e-190 668.7 501 67.7
Lj2A562T49 Lonicera japonica HOM05D004874 ORTHO05D006796 6.0e-178 629.4 471 66.7
Oeu030685.1 Olea europaea HOM05D004874 ORTHO05D006796 4.5e-173 613.2 501 58.5
MBI02_g44126_MAGBIO Magnolia biondii HOM05D004874 ORTHO05D006796 4.1e-126 457.2 366 64.8
Cpa.g.sc196.6 Carica papaya HOM05D004874 ORTHO05D006796 5.0e-124 450.3 327 68.2
Cc07_g14920 Coffea canephora HOM05D004874 ORTHO05D006796 7.5e-120 436.4 399 57.1
Ah.02g124390 Amaranthus hybridus HOM05D004874 ORTHO05D006796 1.4e-110 405.6 367 58.6
MCO16G187 Micromonas commoda HOM05D004874 ORTHO05D006796 3.5e-101 374.4 1400 27.6
Cre12.g519150 Chlamydomonas reinhardtii HOM05D004874 ORTHO05D006796 4.3e-83 314.3 1240 25.6
Os07g0626900 Oryza sativa ssp. japonica HOM05D004874 ORTHO05D006796 1.4e-78 299.3 262 57.6
Sabra07G0068700 Salix brachista HOM05D004874 ORTHO05D006796 2.6e-48 198.7 269 44.6
Nitab4.5_0010573g0010 Nicotiana tabacum HOM05D004874 ORTHO05D006796 3.7e-42 178.3 151 57.6
FvH4_7g04731 Fragaria vesca HOM05D004874 ORTHO05D006796 2.4e-41 175.6 153 59.5
Solyc05g055570.3 Solanum lycopersicum HOM05D004874 ORTHO05D014502 9.7e-27 127.1 112 59.8
HanXRQChr11g0324541 Helianthus annuus HOM05D004874 ORTHO05D006796 1.0e-23 117.1 76 71.1
BcaC09g48952 Brassica carinata HOM05D004874 ORTHO05D014502 5.0e-15 88.2 53 83.0
BcaC06g36156 Brassica carinata HOM05D004874 ORTHO05D014502 1.1e-14 87.0 53 81.1
Zm00001eb137300 Zea mays HOM05D004874 ORTHO05D006796 3.6e-13 82.0 67 58.2
BcaC04g21885 Brassica carinata HOM05D004874 ORTHO05D014502 1.0e-12 80.5 50 80.0
C07p07140 Brassica napus HOM05D004874 ORTHO05D014502 4.0e-12 78.6 48 81.2
C01p44130 Brassica napus HOM05D004874 ORTHO05D014502 6.7e-12 77.8 48 81.2
A01p36370 Brassica napus HOM05D004874 ORTHO05D014502 1.5e-11 76.6 48 79.2
A02p42430 Brassica napus HOM05D004874 ORTHO05D014502 1.5e-11 76.6 48 79.2
BolC7t41133H Brassica oleracea HOM05D004874 ORTHO05D014502 1.5e-11 76.6 48 79.2
BraA01t04208Z Brassica rapa HOM05D004874 ORTHO05D014502 1.5e-11 76.6 48 79.2
BraA02t09174Z Brassica rapa HOM05D004874 ORTHO05D014502 1.5e-11 76.6 48 79.2
C09p26200 Brassica napus HOM05D004874 ORTHO05D014502 2.6e-11 75.9 48 79.2
BolC9t55523H Brassica oleracea HOM05D004874 ORTHO05D014502 2.6e-11 75.9 48 79.2
Nitab4.5_0000904g0190 Nicotiana tabacum HOM05D004874 ORTHO05D006796 5.7e-11 74.7 46 76.1
HanXRQChr12g0385291 Helianthus annuus HOM05D004874 ORTHO05D006796 2.8e-10 72.4 41 82.9
Pp3c19_1530 Physcomitrium patens HOM05D003906 ORTHO05D004776 2.8e-10 72.4 102 38.2
A05p26160 Brassica napus HOM05D004874 ORTHO05D014502 1.8e-09 69.7 50 68.0
HanXRQChr11g0341101 Helianthus annuus HOM05D004874 ORTHO05D006796 3.1e-09 68.9 48 66.7
PRCOL_00002342 Prasinoderma coloniale HOM05D003906 ORTHO05D004776 5.3e-09 68.2 117 37.6
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 2.0e-08 66.2 151 29.8
Pp3c12_10080 Physcomitrium patens HOM05D004797 ORTHO05D005752 1.3e-07 63.5 232 29.3
AagrBONN_evm.TU.Sc2ySwM_228.213 Anthoceros agrestis HOM05D004797 ORTHO05D005752 2.2e-07 62.8 184 30.4
Cre09.g387801 Chlamydomonas reinhardtii HOM05D003906 ORTHO05D004776 8.5e-07 60.8 141 30.5
Os03g0428000 Oryza sativa ssp. japonica HOM05D004874 ORTHO05D006796 8.5e-07 60.8 81 45.7
A03p45290 Brassica napus HOM05D004505 ORTHO05D005249 1.1e-06 60.5 41 73.2
Cre01.g007150 Chlamydomonas reinhardtii HOM05D003906 ORTHO05D004776 7.2e-06 57.8 87 35.6
Mapoly0036s0095 Marchantia polymorpha HOM05D004797 ORTHO05D005752 9.4e-06 57.4 214 27.1


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